co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G09630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044843: cell cycle G1/S phase transition	0.00E+00
2	GO:0006412: translation	6.40E-17
3	GO:0042274: ribosomal small subunit biogenesis	4.63E-08
4	GO:0006364: rRNA processing	5.58E-07
5	GO:0006407: rRNA export from nucleus	4.26E-06
6	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.26E-06
7	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.26E-06
8	GO:0040007: growth	5.11E-06
9	GO:0009967: positive regulation of signal transduction	1.18E-05
10	GO:0042256: mature ribosome assembly	2.19E-05
11	GO:0009735: response to cytokinin	3.51E-05
12	GO:0009088: threonine biosynthetic process	9.94E-05
13	GO:0000028: ribosomal small subunit assembly	1.39E-04
14	GO:0001558: regulation of cell growth	1.60E-04
15	GO:0009097: isoleucine biosynthetic process	1.60E-04
16	GO:0009086: methionine biosynthetic process	2.05E-04
17	GO:0009089: lysine biosynthetic process via diaminopimelate	2.53E-04
18	GO:0006352: DNA-templated transcription, initiation	2.53E-04
19	GO:0051302: regulation of cell division	4.35E-04
20	GO:0071215: cellular response to abscisic acid stimulus	5.20E-04
21	GO:0006520: cellular amino acid metabolic process	6.38E-04
22	GO:0009640: photomorphogenesis	1.51E-03
23	GO:0048367: shoot system development	2.10E-03
24	GO:0009845: seed germination	2.85E-03
25	GO:0006413: translational initiation	3.20E-03
26	GO:0006970: response to osmotic stress	4.75E-03
27	GO:0009651: response to salt stress	4.99E-03
28	GO:0048364: root development	7.06E-03
29	GO:0009734: auxin-activated signaling pathway	8.70E-03
30	GO:0009908: flower development	9.53E-03
31	GO:0009409: response to cold	2.09E-02
32	GO:0007275: multicellular organism development	2.73E-02
33	GO:0007165: signal transduction	2.85E-02
34	GO:0009793: embryo development ending in seed dormancy	3.07E-02
35	GO:0006508: proteolysis	3.76E-02

Rank	GO Term	Adjusted P value
1	GO:0004073: aspartate-semialdehyde dehydrogenase activity	0.00E+00
2	GO:0003735: structural constituent of ribosome	6.90E-17
3	GO:0003729: mRNA binding	2.93E-15
4	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	4.26E-06
5	GO:0030371: translation repressor activity	4.26E-06
6	GO:0005078: MAP-kinase scaffold activity	1.18E-05
7	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.19E-05
8	GO:0008235: metalloexopeptidase activity	1.19E-04
9	GO:0000166: nucleotide binding	7.77E-04
10	GO:0050661: NADP binding	1.39E-03
11	GO:0051287: NAD binding	1.71E-03
12	GO:0003743: translation initiation factor activity	3.73E-03
13	GO:0004871: signal transducer activity	6.12E-03
14	GO:0046983: protein dimerization activity	2.07E-02
15	GO:0005515: protein binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0022626: cytosolic ribosome	4.42E-20
2	GO:0022627: cytosolic small ribosomal subunit	1.40E-12
3	GO:0005730: nucleolus	5.35E-09
4	GO:0005829: cytosol	4.42E-08
5	GO:0022625: cytosolic large ribosomal subunit	1.13E-07
6	GO:0015934: large ribosomal subunit	1.73E-07
7	GO:0009506: plasmodesma	3.00E-06
8	GO:0030686: 90S preribosome	4.26E-06
9	GO:0016020: membrane	1.19E-05
10	GO:0031597: cytosolic proteasome complex	9.94E-05
11	GO:0008180: COP9 signalosome	1.83E-04
12	GO:0005852: eukaryotic translation initiation factor 3 complex	2.53E-04
13	GO:0009507: chloroplast	3.28E-04
14	GO:0015935: small ribosomal subunit	4.63E-04
15	GO:0030529: intracellular ribonucleoprotein complex	9.24E-04
16	GO:0005886: plasma membrane	9.31E-04
17	GO:0005840: ribosome	1.59E-03
18	GO:0005834: heterotrimeric G-protein complex	2.14E-03
19	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.81E-03
20	GO:0005774: vacuolar membrane	5.15E-03
21	GO:0005737: cytoplasm	6.45E-03
22	GO:0009536: plastid	1.95E-02
23	GO:0005618: cell wall	4.51E-02