Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G09200

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000494: box C/D snoRNA 3'-end processing0.00E+00
2GO:0090069: regulation of ribosome biogenesis0.00E+00
3GO:1990258: histone glutamine methylation0.00E+00
4GO:0006412: translation3.96E-44
5GO:0002181: cytoplasmic translation2.98E-07
6GO:0009735: response to cytokinin4.89E-07
7GO:0042254: ribosome biogenesis6.95E-07
8GO:0031167: rRNA methylation2.41E-06
9GO:0009955: adaxial/abaxial pattern specification5.48E-06
10GO:0001510: RNA methylation1.32E-05
11GO:0006407: rRNA export from nucleus3.37E-05
12GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)3.37E-05
13GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)3.37E-05
14GO:2000232: regulation of rRNA processing3.37E-05
15GO:0006364: rRNA processing4.42E-05
16GO:0000027: ribosomal large subunit assembly7.06E-05
17GO:0048569: post-embryonic animal organ development8.48E-05
18GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)8.48E-05
19GO:0008033: tRNA processing1.41E-04
20GO:1902626: assembly of large subunit precursor of preribosome1.47E-04
21GO:0042256: mature ribosome assembly1.47E-04
22GO:0044205: 'de novo' UMP biosynthetic process2.95E-04
23GO:0042274: ribosomal small subunit biogenesis2.95E-04
24GO:0009793: embryo development ending in seed dormancy3.63E-04
25GO:0071493: cellular response to UV-B3.77E-04
26GO:0000470: maturation of LSU-rRNA4.63E-04
27GO:0000911: cytokinesis by cell plate formation5.53E-04
28GO:0000028: ribosomal small subunit assembly7.44E-04
29GO:0006526: arginine biosynthetic process8.45E-04
30GO:0006189: 'de novo' IMP biosynthetic process9.49E-04
31GO:0046686: response to cadmium ion1.04E-03
32GO:0090332: stomatal closure1.06E-03
33GO:0048467: gynoecium development1.65E-03
34GO:0010187: negative regulation of seed germination2.05E-03
35GO:0098542: defense response to other organism2.33E-03
36GO:0040007: growth2.63E-03
37GO:0009651: response to salt stress3.30E-03
38GO:0032502: developmental process3.93E-03
39GO:0010090: trichome morphogenesis4.10E-03
40GO:0009615: response to virus4.83E-03
41GO:0010043: response to zinc ion6.40E-03
42GO:0009965: leaf morphogenesis8.82E-03
43GO:0006457: protein folding1.19E-02
44GO:0016036: cellular response to phosphate starvation1.80E-02
45GO:0042742: defense response to bacterium1.87E-02
46GO:0006970: response to osmotic stress2.72E-02
47GO:0009408: response to heat3.97E-02
RankGO TermAdjusted P value
1GO:1990259: histone-glutamine methyltransferase activity0.00E+00
2GO:0003735: structural constituent of ribosome1.24E-50
3GO:0003729: mRNA binding7.67E-17
4GO:0008649: rRNA methyltransferase activity2.98E-07
5GO:0030515: snoRNA binding7.64E-06
6GO:0003723: RNA binding2.65E-05
7GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity3.37E-05
8GO:0004638: phosphoribosylaminoimidazole carboxylase activity3.37E-05
9GO:0070180: large ribosomal subunit rRNA binding1.47E-04
10GO:0070181: small ribosomal subunit rRNA binding1.47E-04
11GO:0002020: protease binding3.77E-04
12GO:0003746: translation elongation factor activity4.63E-04
13GO:0003713: transcription coactivator activity3.25E-03
14GO:0051082: unfolded protein binding1.28E-02
15GO:0019843: rRNA binding1.51E-02
16GO:0003924: GTPase activity3.97E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome2.13E-43
2GO:0022625: cytosolic large ribosomal subunit3.38E-27
3GO:0005730: nucleolus5.59E-25
4GO:0022627: cytosolic small ribosomal subunit2.62E-24
5GO:0005840: ribosome3.49E-23
6GO:0005829: cytosol2.38E-18
7GO:0009506: plasmodesma2.83E-18
8GO:0016020: membrane1.10E-11
9GO:0015934: large ribosomal subunit2.53E-11
10GO:0005737: cytoplasm3.25E-08
11GO:0005774: vacuolar membrane1.05E-07
12GO:0005618: cell wall1.87E-07
13GO:0009507: chloroplast7.01E-07
14GO:0031428: box C/D snoRNP complex3.75E-06
15GO:0005773: vacuole7.13E-06
16GO:0015030: Cajal body2.07E-05
17GO:0005951: carbamoyl-phosphate synthase complex3.37E-05
18GO:0030686: 90S preribosome3.37E-05
19GO:0032040: small-subunit processome3.56E-05
20GO:0070545: PeBoW complex8.48E-05
21GO:0015935: small ribosomal subunit8.81E-05
22GO:0005853: eukaryotic translation elongation factor 1 complex1.47E-04
23GO:0005742: mitochondrial outer membrane translocase complex8.45E-04
24GO:0005886: plasma membrane3.76E-03
25GO:0016592: mediator complex3.93E-03
26GO:0005654: nucleoplasm1.48E-02
27GO:0005622: intracellular1.64E-02
28GO:0005759: mitochondrial matrix1.77E-02
29GO:0005783: endoplasmic reticulum3.74E-02
Gene type



Gene DE type