Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G08710

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010360: negative regulation of anion channel activity0.00E+00
2GO:0006983: ER overload response0.00E+00
3GO:1901017: negative regulation of potassium ion transmembrane transporter activity0.00E+00
4GO:1901799: negative regulation of proteasomal protein catabolic process0.00E+00
5GO:0019481: L-alanine catabolic process, by transamination0.00E+00
6GO:0048227: plasma membrane to endosome transport0.00E+00
7GO:0010398: xylogalacturonan metabolic process0.00E+00
8GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
9GO:0045185: maintenance of protein location0.00E+00
10GO:0006592: ornithine biosynthetic process0.00E+00
11GO:0006593: ornithine catabolic process0.00E+00
12GO:0032780: negative regulation of ATPase activity0.00E+00
13GO:0006482: protein demethylation0.00E+00
14GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
15GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
16GO:0006212: uracil catabolic process4.28E-06
17GO:0019483: beta-alanine biosynthetic process4.28E-06
18GO:0043069: negative regulation of programmed cell death2.93E-05
19GO:1900425: negative regulation of defense response to bacterium1.39E-04
20GO:0006014: D-ribose metabolic process1.39E-04
21GO:0006561: proline biosynthetic process1.39E-04
22GO:0006468: protein phosphorylation1.50E-04
23GO:1900057: positive regulation of leaf senescence2.48E-04
24GO:0010150: leaf senescence2.86E-04
25GO:0010036: response to boron-containing substance3.07E-04
26GO:1902361: mitochondrial pyruvate transmembrane transport3.07E-04
27GO:0019544: arginine catabolic process to glutamate3.07E-04
28GO:0006144: purine nucleobase metabolic process3.07E-04
29GO:1903648: positive regulation of chlorophyll catabolic process3.07E-04
30GO:0035266: meristem growth3.07E-04
31GO:0007292: female gamete generation3.07E-04
32GO:0019628: urate catabolic process3.07E-04
33GO:0051245: negative regulation of cellular defense response3.07E-04
34GO:0009819: drought recovery3.13E-04
35GO:0043562: cellular response to nitrogen levels3.84E-04
36GO:0000302: response to reactive oxygen species4.05E-04
37GO:0008202: steroid metabolic process5.47E-04
38GO:0048829: root cap development6.38E-04
39GO:0043066: negative regulation of apoptotic process6.71E-04
40GO:0006850: mitochondrial pyruvate transport6.71E-04
41GO:0051788: response to misfolded protein6.71E-04
42GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.71E-04
43GO:0052542: defense response by callose deposition6.71E-04
44GO:0051258: protein polymerization6.71E-04
45GO:0019441: tryptophan catabolic process to kynurenine6.71E-04
46GO:0097054: L-glutamate biosynthetic process6.71E-04
47GO:0015914: phospholipid transport6.71E-04
48GO:0080029: cellular response to boron-containing substance levels6.71E-04
49GO:0006672: ceramide metabolic process6.71E-04
50GO:0071365: cellular response to auxin stimulus8.40E-04
51GO:0000266: mitochondrial fission8.40E-04
52GO:0010359: regulation of anion channel activity1.09E-03
53GO:0061158: 3'-UTR-mediated mRNA destabilization1.09E-03
54GO:0051646: mitochondrion localization1.09E-03
55GO:0002230: positive regulation of defense response to virus by host1.09E-03
56GO:0072661: protein targeting to plasma membrane1.09E-03
57GO:0060968: regulation of gene silencing1.09E-03
58GO:0010053: root epidermal cell differentiation1.19E-03
59GO:0045454: cell redox homeostasis1.27E-03
60GO:0046686: response to cadmium ion1.50E-03
61GO:0009399: nitrogen fixation1.56E-03
62GO:0072583: clathrin-dependent endocytosis1.56E-03
63GO:0071786: endoplasmic reticulum tubular network organization1.56E-03
64GO:1902290: positive regulation of defense response to oomycetes1.56E-03
65GO:0015700: arsenite transport1.56E-03
66GO:0001676: long-chain fatty acid metabolic process1.56E-03
67GO:0010116: positive regulation of abscisic acid biosynthetic process1.56E-03
68GO:0046713: borate transport1.56E-03
69GO:0048194: Golgi vesicle budding1.56E-03
70GO:0006537: glutamate biosynthetic process1.56E-03
71GO:0006612: protein targeting to membrane1.56E-03
72GO:0006979: response to oxidative stress1.75E-03
73GO:0070534: protein K63-linked ubiquitination2.09E-03
74GO:0019676: ammonia assimilation cycle2.09E-03
75GO:0010363: regulation of plant-type hypersensitive response2.09E-03
76GO:0005513: detection of calcium ion2.67E-03
77GO:0007029: endoplasmic reticulum organization2.67E-03
78GO:0018344: protein geranylgeranylation2.67E-03
79GO:0030308: negative regulation of cell growth2.67E-03
80GO:0055114: oxidation-reduction process3.04E-03
81GO:0009267: cellular response to starvation3.30E-03
82GO:0009920: cell plate formation involved in plant-type cell wall biogenesis3.30E-03
83GO:0010337: regulation of salicylic acid metabolic process3.30E-03
84GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.30E-03
85GO:0006301: postreplication repair3.30E-03
86GO:0048827: phyllome development3.30E-03
87GO:0048232: male gamete generation3.30E-03
88GO:0043248: proteasome assembly3.30E-03
89GO:0070814: hydrogen sulfide biosynthetic process3.30E-03
90GO:1902456: regulation of stomatal opening3.30E-03
91GO:0019252: starch biosynthetic process3.35E-03
92GO:0010583: response to cyclopentenone3.83E-03
93GO:0009612: response to mechanical stimulus3.97E-03
94GO:0048280: vesicle fusion with Golgi apparatus3.97E-03
95GO:0080167: response to karrikin4.14E-03
96GO:0016192: vesicle-mediated transport4.47E-03
97GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.68E-03
98GO:1902074: response to salt4.68E-03
99GO:0050790: regulation of catalytic activity4.68E-03
100GO:0006955: immune response4.68E-03
101GO:0043090: amino acid import4.68E-03
102GO:1900056: negative regulation of leaf senescence4.68E-03
103GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway4.68E-03
104GO:0006605: protein targeting5.44E-03
105GO:0010078: maintenance of root meristem identity5.44E-03
106GO:1900150: regulation of defense response to fungus5.44E-03
107GO:2000070: regulation of response to water deprivation5.44E-03
108GO:0016559: peroxisome fission5.44E-03
109GO:0035556: intracellular signal transduction5.55E-03
110GO:0006906: vesicle fusion5.79E-03
111GO:0010120: camalexin biosynthetic process6.23E-03
112GO:0009657: plastid organization6.23E-03
113GO:0006526: arginine biosynthetic process6.23E-03
114GO:0009808: lignin metabolic process6.23E-03
115GO:0009699: phenylpropanoid biosynthetic process6.23E-03
116GO:0090333: regulation of stomatal closure7.07E-03
117GO:0007338: single fertilization7.07E-03
118GO:0046685: response to arsenic-containing substance7.07E-03
119GO:0009821: alkaloid biosynthetic process7.07E-03
120GO:0090305: nucleic acid phosphodiester bond hydrolysis7.07E-03
121GO:0010311: lateral root formation7.11E-03
122GO:0006508: proteolysis7.51E-03
123GO:0010043: response to zinc ion7.83E-03
124GO:0007568: aging7.83E-03
125GO:1900426: positive regulation of defense response to bacterium7.94E-03
126GO:0048364: root development7.97E-03
127GO:0006896: Golgi to vacuole transport8.84E-03
128GO:0006535: cysteine biosynthetic process from serine8.84E-03
129GO:0000103: sulfate assimilation8.84E-03
130GO:0007064: mitotic sister chromatid cohesion8.84E-03
131GO:0009617: response to bacterium9.69E-03
132GO:0030148: sphingolipid biosynthetic process9.79E-03
133GO:0010015: root morphogenesis9.79E-03
134GO:0000038: very long-chain fatty acid metabolic process9.79E-03
135GO:0006887: exocytosis1.02E-02
136GO:0006631: fatty acid metabolic process1.02E-02
137GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.08E-02
138GO:0051707: response to other organism1.11E-02
139GO:0006807: nitrogen compound metabolic process1.18E-02
140GO:0018107: peptidyl-threonine phosphorylation1.18E-02
141GO:0009718: anthocyanin-containing compound biosynthetic process1.18E-02
142GO:0009933: meristem structural organization1.28E-02
143GO:0009266: response to temperature stimulus1.28E-02
144GO:0048467: gynoecium development1.28E-02
145GO:0010167: response to nitrate1.39E-02
146GO:0010039: response to iron ion1.39E-02
147GO:0090351: seedling development1.39E-02
148GO:0007031: peroxisome organization1.39E-02
149GO:0042538: hyperosmotic salinity response1.40E-02
150GO:0006970: response to osmotic stress1.48E-02
151GO:0034976: response to endoplasmic reticulum stress1.50E-02
152GO:0009863: salicylic acid mediated signaling pathway1.62E-02
153GO:2000377: regulation of reactive oxygen species metabolic process1.62E-02
154GO:0005992: trehalose biosynthetic process1.62E-02
155GO:0019344: cysteine biosynthetic process1.62E-02
156GO:0009738: abscisic acid-activated signaling pathway1.69E-02
157GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.85E-02
158GO:0048278: vesicle docking1.86E-02
159GO:0031408: oxylipin biosynthetic process1.86E-02
160GO:0009626: plant-type hypersensitive response1.89E-02
161GO:0046777: protein autophosphorylation1.93E-02
162GO:0030433: ubiquitin-dependent ERAD pathway1.98E-02
163GO:0007005: mitochondrion organization1.98E-02
164GO:0010227: floral organ abscission2.11E-02
165GO:0006012: galactose metabolic process2.11E-02
166GO:0018105: peptidyl-serine phosphorylation2.20E-02
167GO:0009651: response to salt stress2.30E-02
168GO:0042147: retrograde transport, endosome to Golgi2.37E-02
169GO:0016117: carotenoid biosynthetic process2.37E-02
170GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.37E-02
171GO:0015991: ATP hydrolysis coupled proton transport2.50E-02
172GO:0045489: pectin biosynthetic process2.64E-02
173GO:0048544: recognition of pollen2.78E-02
174GO:0061025: membrane fusion2.78E-02
175GO:0009749: response to glucose2.92E-02
176GO:0006623: protein targeting to vacuole2.92E-02
177GO:0071554: cell wall organization or biogenesis3.07E-02
178GO:0002229: defense response to oomycetes3.07E-02
179GO:0006891: intra-Golgi vesicle-mediated transport3.07E-02
180GO:0010193: response to ozone3.07E-02
181GO:0006635: fatty acid beta-oxidation3.07E-02
182GO:0009630: gravitropism3.21E-02
183GO:0007264: small GTPase mediated signal transduction3.21E-02
184GO:0030163: protein catabolic process3.36E-02
185GO:0006633: fatty acid biosynthetic process3.36E-02
186GO:0006914: autophagy3.52E-02
187GO:0009567: double fertilization forming a zygote and endosperm3.52E-02
188GO:0051607: defense response to virus3.83E-02
189GO:0001666: response to hypoxia3.98E-02
190GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.13E-02
191GO:0010029: regulation of seed germination4.15E-02
192GO:0009816: defense response to bacterium, incompatible interaction4.15E-02
193GO:0007166: cell surface receptor signaling pathway4.22E-02
194GO:0006950: response to stress4.48E-02
195GO:0006888: ER to Golgi vesicle-mediated transport4.48E-02
196GO:0008219: cell death4.81E-02
197GO:0042742: defense response to bacterium4.98E-02
198GO:0009813: flavonoid biosynthetic process4.98E-02
RankGO TermAdjusted P value
1GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity0.00E+00
2GO:0051723: protein methylesterase activity0.00E+00
3GO:0004157: dihydropyrimidinase activity0.00E+00
4GO:0004846: urate oxidase activity0.00E+00
5GO:0008777: acetylornithine deacetylase activity0.00E+00
6GO:0042030: ATPase inhibitor activity0.00E+00
7GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
8GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
9GO:0080138: borate uptake transmembrane transporter activity0.00E+00
10GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
11GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
12GO:0003837: beta-ureidopropionase activity0.00E+00
13GO:0015930: glutamate synthase activity0.00E+00
14GO:0016301: kinase activity1.04E-05
15GO:0051213: dioxygenase activity6.13E-05
16GO:0004674: protein serine/threonine kinase activity6.48E-05
17GO:0005496: steroid binding9.62E-05
18GO:0004747: ribokinase activity1.90E-04
19GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity3.07E-04
20GO:0016041: glutamate synthase (ferredoxin) activity3.07E-04
21GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.07E-04
22GO:0032050: clathrin heavy chain binding3.07E-04
23GO:0008865: fructokinase activity3.13E-04
24GO:0008142: oxysterol binding3.84E-04
25GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity5.47E-04
26GO:0004713: protein tyrosine kinase activity6.38E-04
27GO:0045140: inositol phosphoceramide synthase activity6.71E-04
28GO:0032934: sterol binding6.71E-04
29GO:0004061: arylformamidase activity6.71E-04
30GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding6.71E-04
31GO:0015105: arsenite transmembrane transporter activity6.71E-04
32GO:0000975: regulatory region DNA binding1.09E-03
33GO:0050833: pyruvate transmembrane transporter activity1.09E-03
34GO:0004781: sulfate adenylyltransferase (ATP) activity1.09E-03
35GO:0004663: Rab geranylgeranyltransferase activity1.09E-03
36GO:0005093: Rab GDP-dissociation inhibitor activity1.09E-03
37GO:0008430: selenium binding1.09E-03
38GO:0005047: signal recognition particle binding1.09E-03
39GO:0000149: SNARE binding1.36E-03
40GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.56E-03
41GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.56E-03
42GO:0046715: borate transmembrane transporter activity1.56E-03
43GO:0004300: enoyl-CoA hydratase activity1.56E-03
44GO:0005524: ATP binding1.64E-03
45GO:0005484: SNAP receptor activity1.68E-03
46GO:0009916: alternative oxidase activity2.09E-03
47GO:0043015: gamma-tubulin binding2.09E-03
48GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.67E-03
49GO:0051538: 3 iron, 4 sulfur cluster binding2.67E-03
50GO:0004356: glutamate-ammonia ligase activity2.67E-03
51GO:0045431: flavonol synthase activity2.67E-03
52GO:0008234: cysteine-type peptidase activity2.80E-03
53GO:0016853: isomerase activity3.13E-03
54GO:0004029: aldehyde dehydrogenase (NAD) activity3.30E-03
55GO:0035252: UDP-xylosyltransferase activity3.30E-03
56GO:0036402: proteasome-activating ATPase activity3.30E-03
57GO:0004526: ribonuclease P activity3.30E-03
58GO:0102391: decanoate--CoA ligase activity3.97E-03
59GO:0004012: phospholipid-translocating ATPase activity3.97E-03
60GO:0004602: glutathione peroxidase activity3.97E-03
61GO:0004124: cysteine synthase activity3.97E-03
62GO:0051920: peroxiredoxin activity3.97E-03
63GO:0015035: protein disulfide oxidoreductase activity4.00E-03
64GO:0043295: glutathione binding4.68E-03
65GO:0004467: long-chain fatty acid-CoA ligase activity4.68E-03
66GO:0004143: diacylglycerol kinase activity4.68E-03
67GO:0102425: myricetin 3-O-glucosyltransferase activity4.68E-03
68GO:0102360: daphnetin 3-O-glucosyltransferase activity4.68E-03
69GO:0016209: antioxidant activity5.44E-03
70GO:0047893: flavonol 3-O-glucosyltransferase activity5.44E-03
71GO:0004034: aldose 1-epimerase activity5.44E-03
72GO:0003824: catalytic activity6.64E-03
73GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity7.07E-03
74GO:0047617: acyl-CoA hydrolase activity7.94E-03
75GO:0030955: potassium ion binding7.94E-03
76GO:0004743: pyruvate kinase activity7.94E-03
77GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors8.59E-03
78GO:0004712: protein serine/threonine/tyrosine kinase activity9.38E-03
79GO:0016491: oxidoreductase activity9.47E-03
80GO:0005543: phospholipid binding9.79E-03
81GO:0008794: arsenate reductase (glutaredoxin) activity9.79E-03
82GO:0004364: glutathione transferase activity1.07E-02
83GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.18E-02
84GO:0004175: endopeptidase activity1.28E-02
85GO:0004190: aspartic-type endopeptidase activity1.39E-02
86GO:0017025: TBP-class protein binding1.39E-02
87GO:0003954: NADH dehydrogenase activity1.62E-02
88GO:0043130: ubiquitin binding1.62E-02
89GO:0008408: 3'-5' exonuclease activity1.86E-02
90GO:0035251: UDP-glucosyltransferase activity1.86E-02
91GO:0016746: transferase activity, transferring acyl groups2.20E-02
92GO:0003727: single-stranded RNA binding2.24E-02
93GO:0003756: protein disulfide isomerase activity2.24E-02
94GO:0016787: hydrolase activity2.40E-02
95GO:0008080: N-acetyltransferase activity2.64E-02
96GO:0030246: carbohydrate binding2.76E-02
97GO:0004872: receptor activity2.92E-02
98GO:0030170: pyridoxal phosphate binding2.97E-02
99GO:0004252: serine-type endopeptidase activity2.97E-02
100GO:0009055: electron carrier activity3.15E-02
101GO:0004197: cysteine-type endopeptidase activity3.21E-02
102GO:0005516: calmodulin binding3.25E-02
103GO:0004672: protein kinase activity3.27E-02
104GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.45E-02
105GO:0008237: metallopeptidase activity3.67E-02
106GO:0020037: heme binding3.69E-02
107GO:0046872: metal ion binding3.75E-02
108GO:0016597: amino acid binding3.83E-02
109GO:0016413: O-acetyltransferase activity3.83E-02
110GO:0008017: microtubule binding3.86E-02
111GO:0015250: water channel activity3.98E-02
112GO:0009931: calcium-dependent protein serine/threonine kinase activity4.31E-02
113GO:0005509: calcium ion binding4.44E-02
114GO:0004806: triglyceride lipase activity4.48E-02
115GO:0030247: polysaccharide binding4.48E-02
116GO:0004683: calmodulin-dependent protein kinase activity4.48E-02
117GO:0008236: serine-type peptidase activity4.64E-02
118GO:0005096: GTPase activator activity4.98E-02
RankGO TermAdjusted P value
1GO:0046862: chromoplast membrane0.00E+00
2GO:0005785: signal recognition particle receptor complex0.00E+00
3GO:0005886: plasma membrane5.11E-07
4GO:0005783: endoplasmic reticulum2.81E-04
5GO:0045252: oxoglutarate dehydrogenase complex3.07E-04
6GO:0005777: peroxisome4.92E-04
7GO:0031304: intrinsic component of mitochondrial inner membrane6.71E-04
8GO:0005773: vacuole7.52E-04
9GO:0016021: integral component of membrane8.57E-04
10GO:0005829: cytosol1.00E-03
11GO:0016328: lateral plasma membrane1.09E-03
12GO:0005782: peroxisomal matrix1.09E-03
13GO:0005789: endoplasmic reticulum membrane1.44E-03
14GO:0031201: SNARE complex1.52E-03
15GO:0071782: endoplasmic reticulum tubular network1.56E-03
16GO:0005968: Rab-protein geranylgeranyltransferase complex1.56E-03
17GO:0000323: lytic vacuole1.56E-03
18GO:0033179: proton-transporting V-type ATPase, V0 domain2.09E-03
19GO:0031372: UBC13-MMS2 complex2.09E-03
20GO:0000502: proteasome complex2.46E-03
21GO:0005737: cytoplasm2.93E-03
22GO:0030140: trans-Golgi network transport vesicle3.30E-03
23GO:0031597: cytosolic proteasome complex3.97E-03
24GO:0005778: peroxisomal membrane4.62E-03
25GO:0031595: nuclear proteasome complex4.68E-03
26GO:0031305: integral component of mitochondrial inner membrane5.44E-03
27GO:0012507: ER to Golgi transport vesicle membrane5.44E-03
28GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.44E-03
29GO:0005786: signal recognition particle, endoplasmic reticulum targeting6.23E-03
30GO:0031901: early endosome membrane7.07E-03
31GO:0005794: Golgi apparatus7.28E-03
32GO:0008540: proteasome regulatory particle, base subcomplex7.94E-03
33GO:0030125: clathrin vesicle coat8.84E-03
34GO:0031902: late endosome membrane1.02E-02
35GO:0016602: CCAAT-binding factor complex1.18E-02
36GO:0005764: lysosome1.28E-02
37GO:0016020: membrane1.40E-02
38GO:0070469: respiratory chain1.74E-02
39GO:0005741: mitochondrial outer membrane1.86E-02
40GO:0012505: endomembrane system2.08E-02
41GO:0005770: late endosome2.64E-02
42GO:0009504: cell plate2.92E-02
43GO:0005802: trans-Golgi network3.56E-02
44GO:0005788: endoplasmic reticulum lumen4.15E-02
Gene type



Gene DE type