GO Enrichment Analysis of Co-expressed Genes with
AT3G08580
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046686: response to cadmium ion | 1.01E-10 |
| 2 | GO:0009651: response to salt stress | 7.32E-08 |
| 3 | GO:0006099: tricarboxylic acid cycle | 3.15E-07 |
| 4 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 7.17E-06 |
| 5 | GO:0009073: aromatic amino acid family biosynthetic process | 2.85E-05 |
| 6 | GO:0055081: anion homeostasis | 3.25E-05 |
| 7 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 8.18E-05 |
| 8 | GO:0006123: mitochondrial electron transport, cytochrome c to oxygen | 8.18E-05 |
| 9 | GO:0045039: protein import into mitochondrial inner membrane | 1.42E-04 |
| 10 | GO:0006457: protein folding | 2.44E-04 |
| 11 | GO:0009615: response to virus | 2.67E-04 |
| 12 | GO:0033356: UDP-L-arabinose metabolic process | 2.85E-04 |
| 13 | GO:0051205: protein insertion into membrane | 2.85E-04 |
| 14 | GO:0030041: actin filament polymerization | 3.65E-04 |
| 15 | GO:0006564: L-serine biosynthetic process | 3.65E-04 |
| 16 | GO:0006461: protein complex assembly | 3.65E-04 |
| 17 | GO:0010043: response to zinc ion | 4.03E-04 |
| 18 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 4.48E-04 |
| 19 | GO:1901001: negative regulation of response to salt stress | 5.36E-04 |
| 20 | GO:0009423: chorismate biosynthetic process | 5.36E-04 |
| 21 | GO:0031540: regulation of anthocyanin biosynthetic process | 7.22E-04 |
| 22 | GO:0006102: isocitrate metabolic process | 7.22E-04 |
| 23 | GO:0009061: anaerobic respiration | 7.22E-04 |
| 24 | GO:0009060: aerobic respiration | 9.20E-04 |
| 25 | GO:0046685: response to arsenic-containing substance | 9.20E-04 |
| 26 | GO:0043067: regulation of programmed cell death | 1.02E-03 |
| 27 | GO:0043069: negative regulation of programmed cell death | 1.13E-03 |
| 28 | GO:0010072: primary shoot apical meristem specification | 1.24E-03 |
| 29 | GO:0016485: protein processing | 1.24E-03 |
| 30 | GO:0006807: nitrogen compound metabolic process | 1.47E-03 |
| 31 | GO:0070588: calcium ion transmembrane transport | 1.72E-03 |
| 32 | GO:0000162: tryptophan biosynthetic process | 1.85E-03 |
| 33 | GO:0034976: response to endoplasmic reticulum stress | 1.85E-03 |
| 34 | GO:0006487: protein N-linked glycosylation | 1.99E-03 |
| 35 | GO:0006334: nucleosome assembly | 2.26E-03 |
| 36 | GO:0009306: protein secretion | 2.69E-03 |
| 37 | GO:0009561: megagametogenesis | 2.69E-03 |
| 38 | GO:0042391: regulation of membrane potential | 3.00E-03 |
| 39 | GO:0006979: response to oxidative stress | 3.05E-03 |
| 40 | GO:0015986: ATP synthesis coupled proton transport | 3.31E-03 |
| 41 | GO:0030163: protein catabolic process | 3.97E-03 |
| 42 | GO:0045454: cell redox homeostasis | 4.01E-03 |
| 43 | GO:0009627: systemic acquired resistance | 5.04E-03 |
| 44 | GO:0030244: cellulose biosynthetic process | 5.60E-03 |
| 45 | GO:0009832: plant-type cell wall biogenesis | 5.80E-03 |
| 46 | GO:0006839: mitochondrial transport | 7.22E-03 |
| 47 | GO:0008283: cell proliferation | 7.87E-03 |
| 48 | GO:0051707: response to other organism | 7.87E-03 |
| 49 | GO:0009735: response to cytokinin | 8.00E-03 |
| 50 | GO:0000154: rRNA modification | 8.53E-03 |
| 51 | GO:0006486: protein glycosylation | 9.69E-03 |
| 52 | GO:0010224: response to UV-B | 9.93E-03 |
| 53 | GO:0006096: glycolytic process | 1.09E-02 |
| 54 | GO:0048316: seed development | 1.11E-02 |
| 55 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.19E-02 |
| 56 | GO:0009058: biosynthetic process | 1.51E-02 |
| 57 | GO:0009845: seed germination | 1.54E-02 |
| 58 | GO:0009790: embryo development | 1.62E-02 |
| 59 | GO:0006413: translational initiation | 1.74E-02 |
| 60 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.98E-02 |
| 61 | GO:0009617: response to bacterium | 2.07E-02 |
| 62 | GO:0009409: response to cold | 2.41E-02 |
| 63 | GO:0055114: oxidation-reduction process | 2.98E-02 |
| 64 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.98E-02 |
| 65 | GO:0046777: protein autophosphorylation | 3.05E-02 |
| 66 | GO:0009408: response to heat | 3.84E-02 |
| 67 | GO:0009793: embryo development ending in seed dormancy | 4.11E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 2 | GO:0005507: copper ion binding | 6.85E-08 |
| 3 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 3.25E-05 |
| 4 | GO:0004048: anthranilate phosphoribosyltransferase activity | 3.25E-05 |
| 5 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 8.18E-05 |
| 6 | GO:0004634: phosphopyruvate hydratase activity | 8.18E-05 |
| 7 | GO:0004617: phosphoglycerate dehydrogenase activity | 8.18E-05 |
| 8 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 8.18E-05 |
| 9 | GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity | 8.18E-05 |
| 10 | GO:0048531: beta-1,3-galactosyltransferase activity | 8.18E-05 |
| 11 | GO:0004298: threonine-type endopeptidase activity | 8.34E-05 |
| 12 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.42E-04 |
| 13 | GO:0005524: ATP binding | 1.50E-04 |
| 14 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 2.11E-04 |
| 15 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.49E-04 |
| 16 | GO:0008177: succinate dehydrogenase (ubiquinone) activity | 3.65E-04 |
| 17 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.65E-04 |
| 18 | GO:0000104: succinate dehydrogenase activity | 3.65E-04 |
| 19 | GO:0050897: cobalt ion binding | 4.03E-04 |
| 20 | GO:0003746: translation elongation factor activity | 4.41E-04 |
| 21 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 4.48E-04 |
| 22 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 4.48E-04 |
| 23 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 6.27E-04 |
| 24 | GO:0030515: snoRNA binding | 6.27E-04 |
| 25 | GO:0051287: NAD binding | 6.77E-04 |
| 26 | GO:0008135: translation factor activity, RNA binding | 8.20E-04 |
| 27 | GO:0051082: unfolded protein binding | 1.05E-03 |
| 28 | GO:0004129: cytochrome-c oxidase activity | 1.24E-03 |
| 29 | GO:0015114: phosphate ion transmembrane transporter activity | 1.47E-03 |
| 30 | GO:0005388: calcium-transporting ATPase activity | 1.47E-03 |
| 31 | GO:0008266: poly(U) RNA binding | 1.60E-03 |
| 32 | GO:0030552: cAMP binding | 1.72E-03 |
| 33 | GO:0030553: cGMP binding | 1.72E-03 |
| 34 | GO:0005528: FK506 binding | 1.99E-03 |
| 35 | GO:0005516: calmodulin binding | 2.08E-03 |
| 36 | GO:0005216: ion channel activity | 2.12E-03 |
| 37 | GO:0004540: ribonuclease activity | 2.26E-03 |
| 38 | GO:0000287: magnesium ion binding | 2.67E-03 |
| 39 | GO:0003756: protein disulfide isomerase activity | 2.69E-03 |
| 40 | GO:0005249: voltage-gated potassium channel activity | 3.00E-03 |
| 41 | GO:0030551: cyclic nucleotide binding | 3.00E-03 |
| 42 | GO:0050660: flavin adenine dinucleotide binding | 3.14E-03 |
| 43 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 3.15E-03 |
| 44 | GO:0008233: peptidase activity | 3.30E-03 |
| 45 | GO:0010181: FMN binding | 3.31E-03 |
| 46 | GO:0016597: amino acid binding | 4.49E-03 |
| 47 | GO:0009055: electron carrier activity | 5.30E-03 |
| 48 | GO:0004222: metalloendopeptidase activity | 5.99E-03 |
| 49 | GO:0042393: histone binding | 7.22E-03 |
| 50 | GO:0051537: 2 iron, 2 sulfur cluster binding | 8.31E-03 |
| 51 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.76E-03 |
| 52 | GO:0003779: actin binding | 1.22E-02 |
| 53 | GO:0016746: transferase activity, transferring acyl groups | 1.27E-02 |
| 54 | GO:0005525: GTP binding | 1.44E-02 |
| 55 | GO:0030170: pyridoxal phosphate binding | 1.57E-02 |
| 56 | GO:0005509: calcium ion binding | 1.64E-02 |
| 57 | GO:0003743: translation initiation factor activity | 2.04E-02 |
| 58 | GO:0005515: protein binding | 2.09E-02 |
| 59 | GO:0008270: zinc ion binding | 2.16E-02 |
| 60 | GO:0003924: GTPase activity | 3.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 2 | GO:0005618: cell wall | 2.05E-06 |
| 3 | GO:0005739: mitochondrion | 2.61E-06 |
| 4 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.24E-05 |
| 5 | GO:0005774: vacuolar membrane | 1.46E-05 |
| 6 | GO:0045252: oxoglutarate dehydrogenase complex | 3.25E-05 |
| 7 | GO:0005911: cell-cell junction | 3.25E-05 |
| 8 | GO:0005829: cytosol | 3.67E-05 |
| 9 | GO:0005750: mitochondrial respiratory chain complex III | 4.55E-05 |
| 10 | GO:0005758: mitochondrial intermembrane space | 6.68E-05 |
| 11 | GO:0000015: phosphopyruvate hydratase complex | 8.18E-05 |
| 12 | GO:0005741: mitochondrial outer membrane | 8.34E-05 |
| 13 | GO:0005839: proteasome core complex | 8.34E-05 |
| 14 | GO:0005759: mitochondrial matrix | 1.37E-04 |
| 15 | GO:0005730: nucleolus | 1.81E-04 |
| 16 | GO:0005788: endoplasmic reticulum lumen | 2.83E-04 |
| 17 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 2.85E-04 |
| 18 | GO:0005773: vacuole | 3.14E-04 |
| 19 | GO:0008250: oligosaccharyltransferase complex | 3.65E-04 |
| 20 | GO:0016020: membrane | 4.07E-04 |
| 21 | GO:0031428: box C/D snoRNP complex | 4.48E-04 |
| 22 | GO:0009506: plasmodesma | 5.19E-04 |
| 23 | GO:0005743: mitochondrial inner membrane | 5.62E-04 |
| 24 | GO:0009536: plastid | 6.75E-04 |
| 25 | GO:0045273: respiratory chain complex II | 7.22E-04 |
| 26 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 7.22E-04 |
| 27 | GO:0000502: proteasome complex | 7.51E-04 |
| 28 | GO:0000326: protein storage vacuole | 8.20E-04 |
| 29 | GO:0005747: mitochondrial respiratory chain complex I | 9.07E-04 |
| 30 | GO:0005740: mitochondrial envelope | 1.13E-03 |
| 31 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.24E-03 |
| 32 | GO:0032040: small-subunit processome | 1.36E-03 |
| 33 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 1.72E-03 |
| 34 | GO:0070469: respiratory chain | 2.12E-03 |
| 35 | GO:0048046: apoplast | 3.46E-03 |
| 36 | GO:0009507: chloroplast | 6.02E-03 |
| 37 | GO:0005887: integral component of plasma membrane | 6.69E-03 |
| 38 | GO:0005886: plasma membrane | 7.44E-03 |
| 39 | GO:0022626: cytosolic ribosome | 8.37E-03 |
| 40 | GO:0005783: endoplasmic reticulum | 9.31E-03 |
| 41 | GO:0009579: thylakoid | 1.05E-02 |
| 42 | GO:0005794: Golgi apparatus | 1.20E-02 |
| 43 | GO:0009705: plant-type vacuole membrane | 1.83E-02 |
| 44 | GO:0009505: plant-type cell wall | 2.23E-02 |
| 45 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.67E-02 |
| 46 | GO:0009570: chloroplast stroma | 3.26E-02 |