GO Enrichment Analysis of Co-expressed Genes with
AT3G07390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046109: uridine biosynthetic process | 0.00E+00 |
| 2 | GO:0017126: nucleologenesis | 0.00E+00 |
| 3 | GO:0055071: manganese ion homeostasis | 1.04E-05 |
| 4 | GO:0080009: mRNA methylation | 2.78E-05 |
| 5 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 7.70E-05 |
| 6 | GO:0006542: glutamine biosynthetic process | 1.07E-04 |
| 7 | GO:0018279: protein N-linked glycosylation via asparagine | 1.40E-04 |
| 8 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.74E-04 |
| 9 | GO:0006828: manganese ion transport | 1.74E-04 |
| 10 | GO:0006401: RNA catabolic process | 2.50E-04 |
| 11 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.74E-04 |
| 12 | GO:0006816: calcium ion transport | 5.09E-04 |
| 13 | GO:0006406: mRNA export from nucleus | 8.05E-04 |
| 14 | GO:0051302: regulation of cell division | 8.59E-04 |
| 15 | GO:0080156: mitochondrial mRNA modification | 1.44E-03 |
| 16 | GO:0042128: nitrate assimilation | 1.97E-03 |
| 17 | GO:0009735: response to cytokinin | 2.00E-03 |
| 18 | GO:0030244: cellulose biosynthetic process | 2.19E-03 |
| 19 | GO:0048767: root hair elongation | 2.26E-03 |
| 20 | GO:0006631: fatty acid metabolic process | 2.88E-03 |
| 21 | GO:0009664: plant-type cell wall organization | 3.54E-03 |
| 22 | GO:0006096: glycolytic process | 4.17E-03 |
| 23 | GO:0000398: mRNA splicing, via spliceosome | 5.22E-03 |
| 24 | GO:0009790: embryo development | 6.14E-03 |
| 25 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 7.45E-03 |
| 26 | GO:0009826: unidimensional cell growth | 9.10E-03 |
| 27 | GO:0080167: response to karrikin | 1.09E-02 |
| 28 | GO:0009651: response to salt stress | 1.46E-02 |
| 29 | GO:0048364: root development | 1.47E-02 |
| 30 | GO:0055114: oxidation-reduction process | 3.77E-02 |
| 31 | GO:0046686: response to cadmium ion | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000384: first spliceosomal transesterification activity | 0.00E+00 |
| 2 | GO:0015410: manganese-transporting ATPase activity | 0.00E+00 |
| 3 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.04E-05 |
| 4 | GO:0004751: ribose-5-phosphate isomerase activity | 5.03E-05 |
| 5 | GO:0003995: acyl-CoA dehydrogenase activity | 1.07E-04 |
| 6 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.07E-04 |
| 7 | GO:0004356: glutamate-ammonia ligase activity | 1.40E-04 |
| 8 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.40E-04 |
| 9 | GO:0005388: calcium-transporting ATPase activity | 6.04E-04 |
| 10 | GO:0004518: nuclease activity | 1.50E-03 |
| 11 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.11E-03 |
| 12 | GO:0004222: metalloendopeptidase activity | 2.33E-03 |
| 13 | GO:0050897: cobalt ion binding | 2.41E-03 |
| 14 | GO:0003697: single-stranded DNA binding | 2.56E-03 |
| 15 | GO:0005507: copper ion binding | 3.08E-03 |
| 16 | GO:0043621: protein self-association | 3.20E-03 |
| 17 | GO:0016491: oxidoreductase activity | 5.73E-03 |
| 18 | GO:0003723: RNA binding | 6.71E-03 |
| 19 | GO:0050660: flavin adenine dinucleotide binding | 1.03E-02 |
| 20 | GO:0003924: GTPase activity | 1.43E-02 |
| 21 | GO:0003676: nucleic acid binding | 1.80E-02 |
| 22 | GO:0005515: protein binding | 2.23E-02 |
| 23 | GO:0005516: calmodulin binding | 2.88E-02 |
| 24 | GO:0005525: GTP binding | 3.07E-02 |
| 25 | GO:0005524: ATP binding | 4.35E-02 |
| 26 | GO:0046872: metal ion binding | 4.69E-02 |
| 27 | GO:0003729: mRNA binding | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036396: MIS complex | 0.00E+00 |
| 2 | GO:0070274: RES complex | 0.00E+00 |
| 3 | GO:0008250: oligosaccharyltransferase complex | 1.40E-04 |
| 4 | GO:0016607: nuclear speck | 2.30E-04 |
| 5 | GO:0071011: precatalytic spliceosome | 4.18E-04 |
| 6 | GO:0005686: U2 snRNP | 4.63E-04 |
| 7 | GO:0005829: cytosol | 4.81E-04 |
| 8 | GO:0090404: pollen tube tip | 5.09E-04 |
| 9 | GO:0071013: catalytic step 2 spliceosome | 5.09E-04 |
| 10 | GO:0005750: mitochondrial respiratory chain complex III | 6.53E-04 |
| 11 | GO:0031902: late endosome membrane | 2.88E-03 |
| 12 | GO:0005747: mitochondrial respiratory chain complex I | 4.26E-03 |
| 13 | GO:0012505: endomembrane system | 4.63E-03 |
| 14 | GO:0005759: mitochondrial matrix | 6.46E-03 |
| 15 | GO:0005774: vacuolar membrane | 1.51E-02 |
| 16 | GO:0005794: Golgi apparatus | 1.93E-02 |
| 17 | GO:0022626: cytosolic ribosome | 2.08E-02 |
| 18 | GO:0005777: peroxisome | 2.37E-02 |
| 19 | GO:0005802: trans-Golgi network | 3.01E-02 |
| 20 | GO:0005783: endoplasmic reticulum | 3.06E-02 |
| 21 | GO:0005768: endosome | 3.30E-02 |
| 22 | GO:0009536: plastid | 4.12E-02 |
| 23 | GO:0009505: plant-type cell wall | 4.18E-02 |
| 24 | GO:0000139: Golgi membrane | 4.42E-02 |
| 25 | GO:0005789: endoplasmic reticulum membrane | 4.81E-02 |