GO Enrichment Analysis of Co-expressed Genes with
AT3G07310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 3.37E-05 |
| 4 | GO:0006106: fumarate metabolic process | 3.64E-05 |
| 5 | GO:0010207: photosystem II assembly | 5.37E-05 |
| 6 | GO:0080005: photosystem stoichiometry adjustment | 9.09E-05 |
| 7 | GO:0010305: leaf vascular tissue pattern formation | 1.69E-04 |
| 8 | GO:0080170: hydrogen peroxide transmembrane transport | 2.33E-04 |
| 9 | GO:0010109: regulation of photosynthesis | 3.14E-04 |
| 10 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 4.92E-04 |
| 11 | GO:0030091: protein repair | 7.90E-04 |
| 12 | GO:0034968: histone lysine methylation | 7.90E-04 |
| 13 | GO:0009642: response to light intensity | 7.90E-04 |
| 14 | GO:0016571: histone methylation | 1.12E-03 |
| 15 | GO:0009638: phototropism | 1.12E-03 |
| 16 | GO:0046856: phosphatidylinositol dephosphorylation | 1.36E-03 |
| 17 | GO:0010628: positive regulation of gene expression | 1.62E-03 |
| 18 | GO:0006108: malate metabolic process | 1.62E-03 |
| 19 | GO:0010588: cotyledon vascular tissue pattern formation | 1.62E-03 |
| 20 | GO:0006833: water transport | 2.04E-03 |
| 21 | GO:2000377: regulation of reactive oxygen species metabolic process | 2.18E-03 |
| 22 | GO:0008299: isoprenoid biosynthetic process | 2.33E-03 |
| 23 | GO:0019915: lipid storage | 2.48E-03 |
| 24 | GO:0000271: polysaccharide biosynthetic process | 3.30E-03 |
| 25 | GO:0080022: primary root development | 3.30E-03 |
| 26 | GO:0034220: ion transmembrane transport | 3.30E-03 |
| 27 | GO:0010087: phloem or xylem histogenesis | 3.30E-03 |
| 28 | GO:0045489: pectin biosynthetic process | 3.47E-03 |
| 29 | GO:0071472: cellular response to salt stress | 3.47E-03 |
| 30 | GO:0071805: potassium ion transmembrane transport | 4.75E-03 |
| 31 | GO:0042128: nitrate assimilation | 5.55E-03 |
| 32 | GO:0006629: lipid metabolic process | 5.69E-03 |
| 33 | GO:0005975: carbohydrate metabolic process | 6.15E-03 |
| 34 | GO:0006811: ion transport | 6.61E-03 |
| 35 | GO:0009631: cold acclimation | 6.83E-03 |
| 36 | GO:0016051: carbohydrate biosynthetic process | 7.28E-03 |
| 37 | GO:0006099: tricarboxylic acid cycle | 7.51E-03 |
| 38 | GO:0009737: response to abscisic acid | 9.46E-03 |
| 39 | GO:0009416: response to light stimulus | 1.01E-02 |
| 40 | GO:0009585: red, far-red light phototransduction | 1.07E-02 |
| 41 | GO:0006813: potassium ion transport | 1.07E-02 |
| 42 | GO:0006857: oligopeptide transport | 1.12E-02 |
| 43 | GO:0048367: shoot system development | 1.23E-02 |
| 44 | GO:0055085: transmembrane transport | 1.28E-02 |
| 45 | GO:0009651: response to salt stress | 1.68E-02 |
| 46 | GO:0006413: translational initiation | 1.92E-02 |
| 47 | GO:0009414: response to water deprivation | 2.00E-02 |
| 48 | GO:0007166: cell surface receptor signaling pathway | 2.23E-02 |
| 49 | GO:0010468: regulation of gene expression | 2.29E-02 |
| 50 | GO:0009733: response to auxin | 2.31E-02 |
| 51 | GO:0009409: response to cold | 2.78E-02 |
| 52 | GO:0048366: leaf development | 3.10E-02 |
| 53 | GO:0046777: protein autophosphorylation | 3.38E-02 |
| 54 | GO:0045892: negative regulation of transcription, DNA-templated | 3.70E-02 |
| 55 | GO:0055114: oxidation-reduction process | 3.79E-02 |
| 56 | GO:0016042: lipid catabolic process | 4.16E-02 |
| 57 | GO:0008152: metabolic process | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 2 | GO:0004333: fumarate hydratase activity | 3.64E-05 |
| 3 | GO:0050139: nicotinate-N-glucosyltransferase activity | 3.64E-05 |
| 4 | GO:0008081: phosphoric diester hydrolase activity | 4.65E-05 |
| 5 | GO:0070402: NADPH binding | 1.58E-04 |
| 6 | GO:0010429: methyl-CpNpN binding | 1.58E-04 |
| 7 | GO:0010428: methyl-CpNpG binding | 1.58E-04 |
| 8 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 2.33E-04 |
| 9 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 4.92E-04 |
| 10 | GO:0004629: phospholipase C activity | 4.92E-04 |
| 11 | GO:0000293: ferric-chelate reductase activity | 4.92E-04 |
| 12 | GO:0035673: oligopeptide transmembrane transporter activity | 4.92E-04 |
| 13 | GO:0042578: phosphoric ester hydrolase activity | 4.92E-04 |
| 14 | GO:0004017: adenylate kinase activity | 5.88E-04 |
| 15 | GO:0004435: phosphatidylinositol phospholipase C activity | 5.88E-04 |
| 16 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 5.88E-04 |
| 17 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.01E-03 |
| 18 | GO:0008327: methyl-CpG binding | 1.36E-03 |
| 19 | GO:0015198: oligopeptide transporter activity | 1.49E-03 |
| 20 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 1.49E-03 |
| 21 | GO:0004565: beta-galactosidase activity | 1.62E-03 |
| 22 | GO:0015079: potassium ion transmembrane transporter activity | 2.33E-03 |
| 23 | GO:0004176: ATP-dependent peptidase activity | 2.48E-03 |
| 24 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 2.64E-03 |
| 25 | GO:0018024: histone-lysine N-methyltransferase activity | 3.13E-03 |
| 26 | GO:0016853: isomerase activity | 3.64E-03 |
| 27 | GO:0004871: signal transducer activity | 4.84E-03 |
| 28 | GO:0015250: water channel activity | 5.15E-03 |
| 29 | GO:0030145: manganese ion binding | 6.83E-03 |
| 30 | GO:0042393: histone binding | 7.97E-03 |
| 31 | GO:0035091: phosphatidylinositol binding | 9.17E-03 |
| 32 | GO:0031625: ubiquitin protein ligase binding | 1.15E-02 |
| 33 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.29E-02 |
| 34 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.29E-02 |
| 35 | GO:0016758: transferase activity, transferring hexosyl groups | 1.58E-02 |
| 36 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.92E-02 |
| 37 | GO:0008194: UDP-glycosyltransferase activity | 2.19E-02 |
| 38 | GO:0003743: translation initiation factor activity | 2.26E-02 |
| 39 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.40E-02 |
| 40 | GO:0008168: methyltransferase activity | 2.69E-02 |
| 41 | GO:0016491: oxidoreductase activity | 2.70E-02 |
| 42 | GO:0008233: peptidase activity | 3.18E-02 |
| 43 | GO:0009055: electron carrier activity | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.77E-06 |
| 2 | GO:0045239: tricarboxylic acid cycle enzyme complex | 3.64E-05 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 6.04E-05 |
| 4 | GO:0030093: chloroplast photosystem I | 9.09E-05 |
| 5 | GO:0009570: chloroplast stroma | 1.38E-04 |
| 6 | GO:0009534: chloroplast thylakoid | 2.76E-04 |
| 7 | GO:0009941: chloroplast envelope | 1.49E-03 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.49E-03 |
| 9 | GO:0009508: plastid chromosome | 1.62E-03 |
| 10 | GO:0009579: thylakoid | 1.87E-03 |
| 11 | GO:0000775: chromosome, centromeric region | 2.64E-03 |
| 12 | GO:0009295: nucleoid | 4.75E-03 |
| 13 | GO:0005887: integral component of plasma membrane | 7.72E-03 |
| 14 | GO:0031977: thylakoid lumen | 8.21E-03 |
| 15 | GO:0031969: chloroplast membrane | 3.22E-02 |
| 16 | GO:0043231: intracellular membrane-bounded organelle | 4.55E-02 |