Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G07100

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043487: regulation of RNA stability0.00E+00
2GO:0030581: symbiont intracellular protein transport in host0.00E+00
3GO:0000188: inactivation of MAPK activity0.00E+00
4GO:0016236: macroautophagy0.00E+00
5GO:0010606: positive regulation of cytoplasmic mRNA processing body assembly0.00E+00
6GO:0007160: cell-matrix adhesion0.00E+00
7GO:0006903: vesicle targeting0.00E+00
8GO:0090306: spindle assembly involved in meiosis0.00E+00
9GO:0080034: host response to induction by symbiont of tumor, nodule or growth in host0.00E+00
10GO:0045324: late endosome to vacuole transport1.41E-06
11GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay1.67E-05
12GO:0048589: developmental growth1.67E-05
13GO:0006607: NLS-bearing protein import into nucleus1.67E-05
14GO:0071902: positive regulation of protein serine/threonine kinase activity3.37E-05
15GO:0055047: generative cell mitosis3.37E-05
16GO:0030242: pexophagy3.37E-05
17GO:0009846: pollen germination3.96E-05
18GO:0016197: endosomal transport8.48E-05
19GO:0048571: long-day photoperiodism8.48E-05
20GO:0009660: amyloplast organization8.48E-05
21GO:0006610: ribosomal protein import into nucleus8.48E-05
22GO:0010506: regulation of autophagy1.47E-04
23GO:0032012: regulation of ARF protein signal transduction1.47E-04
24GO:0071230: cellular response to amino acid stimulus1.47E-04
25GO:0007032: endosome organization1.47E-04
26GO:0031929: TOR signaling1.47E-04
27GO:0032940: secretion by cell1.47E-04
28GO:0006623: protein targeting to vacuole1.78E-04
29GO:0006612: protein targeting to membrane2.18E-04
30GO:0006893: Golgi to plasma membrane transport2.18E-04
31GO:0007004: telomere maintenance via telomerase2.18E-04
32GO:1901000: regulation of response to salt stress2.18E-04
33GO:0016579: protein deubiquitination2.65E-04
34GO:0042594: response to starvation2.95E-04
35GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA2.95E-04
36GO:0045723: positive regulation of fatty acid biosynthetic process2.95E-04
37GO:1990937: xylan acetylation2.95E-04
38GO:0010225: response to UV-C3.77E-04
39GO:0034052: positive regulation of plant-type hypersensitive response3.77E-04
40GO:0045491: xylan metabolic process4.63E-04
41GO:0009959: negative gravitropism4.63E-04
42GO:0009267: cellular response to starvation4.63E-04
43GO:0000060: protein import into nucleus, translocation4.63E-04
44GO:0006897: endocytosis5.47E-04
45GO:0033962: cytoplasmic mRNA processing body assembly5.53E-04
46GO:0017148: negative regulation of translation5.53E-04
47GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.47E-04
48GO:0030307: positive regulation of cell growth6.47E-04
49GO:0006397: mRNA processing6.90E-04
50GO:0052543: callose deposition in cell wall7.44E-04
51GO:0006075: (1->3)-beta-D-glucan biosynthetic process8.45E-04
52GO:0060321: acceptance of pollen8.45E-04
53GO:0010018: far-red light signaling pathway1.06E-03
54GO:0048354: mucilage biosynthetic process involved in seed coat development1.06E-03
55GO:0006298: mismatch repair1.17E-03
56GO:0010105: negative regulation of ethylene-activated signaling pathway1.40E-03
57GO:0008361: regulation of cell size1.40E-03
58GO:0007033: vacuole organization1.78E-03
59GO:0042753: positive regulation of circadian rhythm1.91E-03
60GO:0042023: DNA endoreduplication1.91E-03
61GO:0006511: ubiquitin-dependent protein catabolic process1.94E-03
62GO:0006406: mRNA export from nucleus2.05E-03
63GO:0006289: nucleotide-excision repair2.05E-03
64GO:0009863: salicylic acid mediated signaling pathway2.05E-03
65GO:0010187: negative regulation of seed germination2.05E-03
66GO:0016575: histone deacetylation2.19E-03
67GO:0080092: regulation of pollen tube growth2.48E-03
68GO:0010017: red or far-red light signaling pathway2.48E-03
69GO:0010091: trichome branching2.78E-03
70GO:0045492: xylan biosynthetic process2.78E-03
71GO:0009561: megagametogenesis2.78E-03
72GO:0016567: protein ubiquitination2.85E-03
73GO:0051028: mRNA transport2.94E-03
74GO:0006606: protein import into nucleus3.09E-03
75GO:0008360: regulation of cell shape3.25E-03
76GO:0009556: microsporogenesis3.59E-03
77GO:0006886: intracellular protein transport4.35E-03
78GO:0015031: protein transport4.36E-03
79GO:0006904: vesicle docking involved in exocytosis4.46E-03
80GO:0009788: negative regulation of abscisic acid-activated signaling pathway5.02E-03
81GO:0009816: defense response to bacterium, incompatible interaction5.02E-03
82GO:0016049: cell growth5.60E-03
83GO:0008219: cell death5.79E-03
84GO:0010218: response to far red light6.20E-03
85GO:0009834: plant-type secondary cell wall biogenesis6.20E-03
86GO:0009867: jasmonic acid mediated signaling pathway6.82E-03
87GO:0006887: exocytosis7.69E-03
88GO:0008283: cell proliferation8.14E-03
89GO:0009908: flower development8.30E-03
90GO:0000209: protein polyubiquitination8.37E-03
91GO:0009555: pollen development9.19E-03
92GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process9.30E-03
93GO:0009585: red, far-red light phototransduction1.00E-02
94GO:0010224: response to UV-B1.03E-02
95GO:0048367: shoot system development1.15E-02
96GO:0006468: protein phosphorylation1.17E-02
97GO:0009626: plant-type hypersensitive response1.18E-02
98GO:0009651: response to salt stress1.49E-02
99GO:0007623: circadian rhythm1.89E-02
100GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.05E-02
101GO:0006470: protein dephosphorylation2.08E-02
102GO:0008380: RNA splicing2.15E-02
103GO:0009860: pollen tube growth2.72E-02
104GO:0006952: defense response2.81E-02
105GO:0009723: response to ethylene2.87E-02
106GO:0048366: leaf development2.90E-02
107GO:0016192: vesicle-mediated transport3.12E-02
108GO:0046777: protein autophosphorylation3.16E-02
109GO:0045892: negative regulation of transcription, DNA-templated3.46E-02
110GO:0009751: response to salicylic acid3.93E-02
111GO:0009737: response to abscisic acid3.97E-02
112GO:0048364: root development4.10E-02
113GO:0009793: embryo development ending in seed dormancy4.31E-02
114GO:0009873: ethylene-activated signaling pathway4.76E-02
RankGO TermAdjusted P value
1GO:0008240: tripeptidyl-peptidase activity0.00E+00
2GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity0.00E+00
3GO:0005515: protein binding8.90E-06
4GO:0008139: nuclear localization sequence binding4.16E-05
5GO:0043021: ribonucleoprotein complex binding8.48E-05
6GO:0070034: telomerase RNA binding8.48E-05
7GO:0036459: thiol-dependent ubiquitinyl hydrolase activity8.81E-05
8GO:0004843: thiol-dependent ubiquitin-specific protease activity1.91E-04
9GO:0005086: ARF guanyl-nucleotide exchange factor activity2.95E-04
10GO:0001106: RNA polymerase II transcription corepressor activity2.95E-04
11GO:0005085: guanyl-nucleotide exchange factor activity6.47E-04
12GO:0042162: telomeric DNA binding6.47E-04
13GO:0030674: protein binding, bridging7.44E-04
14GO:0003843: 1,3-beta-D-glucan synthase activity8.45E-04
15GO:0004842: ubiquitin-protein transferase activity8.70E-04
16GO:0016874: ligase activity1.04E-03
17GO:0031490: chromatin DNA binding1.06E-03
18GO:0008565: protein transporter activity1.62E-03
19GO:0004725: protein tyrosine phosphatase activity1.91E-03
20GO:0004407: histone deacetylase activity2.05E-03
21GO:0004540: ribonuclease activity2.33E-03
22GO:0003713: transcription coactivator activity3.25E-03
23GO:0008536: Ran GTPase binding3.25E-03
24GO:0003684: damaged DNA binding4.28E-03
25GO:0004672: protein kinase activity5.23E-03
26GO:0003729: mRNA binding5.32E-03
27GO:0003697: single-stranded DNA binding6.82E-03
28GO:0004712: protein serine/threonine/tyrosine kinase activity7.25E-03
29GO:0043621: protein self-association8.60E-03
30GO:0005198: structural molecule activity8.82E-03
31GO:0008026: ATP-dependent helicase activity1.34E-02
32GO:0004386: helicase activity1.37E-02
33GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.24E-02
34GO:0004674: protein serine/threonine kinase activity2.42E-02
35GO:0003682: chromatin binding2.69E-02
36GO:0061630: ubiquitin protein ligase activity3.12E-02
37GO:0042803: protein homodimerization activity3.54E-02
RankGO TermAdjusted P value
1GO:0071942: XPC complex0.00E+00
2GO:0000111: nucleotide-excision repair factor 2 complex0.00E+00
3GO:0008305: integrin complex0.00E+00
4GO:0071561: nucleus-vacuole junction0.00E+00
5GO:0005643: nuclear pore1.23E-05
6GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I3.37E-05
7GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II3.37E-05
8GO:0005634: nucleus8.08E-05
9GO:0005697: telomerase holoenzyme complex8.48E-05
10GO:0031931: TORC1 complex1.47E-04
11GO:0030130: clathrin coat of trans-Golgi network vesicle1.47E-04
12GO:0030132: clathrin coat of coated pit1.47E-04
13GO:0005770: late endosome1.53E-04
14GO:0000932: P-body2.81E-04
15GO:0032588: trans-Golgi network membrane4.63E-04
16GO:0000118: histone deacetylase complex5.53E-04
17GO:0034399: nuclear periphery7.44E-04
18GO:0005774: vacuolar membrane7.45E-04
19GO:0000148: 1,3-beta-D-glucan synthase complex8.45E-04
20GO:0005794: Golgi apparatus1.13E-03
21GO:0019013: viral nucleocapsid1.52E-03
22GO:0005769: early endosome1.91E-03
23GO:0005802: trans-Golgi network2.39E-03
24GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.12E-03
25GO:0031965: nuclear membrane3.59E-03
26GO:0000145: exocyst3.93E-03
27GO:0000785: chromatin3.93E-03
28GO:0030529: intracellular ribonucleoprotein complex4.83E-03
29GO:0005856: cytoskeleton8.82E-03
30GO:0005681: spliceosomal complex1.13E-02
31GO:0010008: endosome membrane1.15E-02
32GO:0005654: nucleoplasm1.48E-02
33GO:0005829: cytosol1.48E-02
34GO:0009524: phragmoplast1.56E-02
35GO:0000139: Golgi membrane2.53E-02
36GO:0009506: plasmodesma2.61E-02
37GO:0005773: vacuole2.66E-02
38GO:0005783: endoplasmic reticulum3.74E-02
39GO:0005886: plasma membrane4.16E-02
40GO:0043231: intracellular membrane-bounded organelle4.26E-02
Gene type



Gene DE type