co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G06860

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0016236: macroautophagy	0.00E+00
2	GO:0036258: multivesicular body assembly	0.00E+00
3	GO:0006631: fatty acid metabolic process	1.17E-06
4	GO:0006096: glycolytic process	3.07E-06
5	GO:0030242: pexophagy	8.12E-06
6	GO:0006422: aspartyl-tRNA aminoacylation	8.12E-06
7	GO:1900055: regulation of leaf senescence	3.99E-05
8	GO:0046686: response to cadmium ion	5.23E-05
9	GO:0070676: intralumenal vesicle formation	6.14E-05
10	GO:0043481: anthocyanin accumulation in tissues in response to UV light	6.14E-05
11	GO:0045324: late endosome to vacuole transport	8.58E-05
12	GO:0006542: glutamine biosynthetic process	8.58E-05
13	GO:0010358: leaf shaping	1.41E-04
14	GO:0042176: regulation of protein catabolic process	1.41E-04
15	GO:0046470: phosphatidylcholine metabolic process	2.04E-04
16	GO:0006002: fructose 6-phosphate metabolic process	2.71E-04
17	GO:0009827: plant-type cell wall modification	2.71E-04
18	GO:0006896: Golgi to vacuole transport	3.81E-04
19	GO:0048765: root hair cell differentiation	4.19E-04
20	GO:0000266: mitochondrial fission	4.58E-04
21	GO:2000377: regulation of reactive oxygen species metabolic process	6.66E-04
22	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.38E-04
23	GO:0042335: cuticle development	9.85E-04
24	GO:0055072: iron ion homeostasis	1.13E-03
25	GO:0006623: protein targeting to vacuole	1.13E-03
26	GO:0042128: nitrate assimilation	1.62E-03
27	GO:0048767: root hair elongation	1.85E-03
28	GO:0010119: regulation of stomatal movement	1.97E-03
29	GO:0009926: auxin polar transport	2.49E-03
30	GO:0009846: pollen germination	2.90E-03
31	GO:0009845: seed germination	4.75E-03
32	GO:0006633: fatty acid biosynthetic process	5.26E-03
33	GO:0010150: leaf senescence	5.61E-03
34	GO:0080167: response to karrikin	8.82E-03
35	GO:0016042: lipid catabolic process	1.14E-02
36	GO:0006397: mRNA processing	1.20E-02
37	GO:0048364: root development	1.20E-02
38	GO:0009873: ethylene-activated signaling pathway	1.39E-02
39	GO:0009738: abscisic acid-activated signaling pathway	1.70E-02
40	GO:0009555: pollen development	1.74E-02
41	GO:0006511: ubiquitin-dependent protein catabolic process	2.17E-02
42	GO:0006468: protein phosphorylation	2.50E-02
43	GO:0015031: protein transport	3.42E-02
44	GO:0005975: carbohydrate metabolic process	3.88E-02
45	GO:0007165: signal transduction	4.86E-02
46	GO:0009737: response to abscisic acid	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0030955: potassium ion binding	2.21E-06
2	GO:0004743: pyruvate kinase activity	2.21E-06
3	GO:0019707: protein-cysteine S-acyltransferase activity	8.12E-06
4	GO:0010013: N-1-naphthylphthalamic acid binding	8.12E-06
5	GO:0004815: aspartate-tRNA ligase activity	8.12E-06
6	GO:0031176: endo-1,4-beta-xylanase activity	6.14E-05
7	GO:0003995: acyl-CoA dehydrogenase activity	8.58E-05
8	GO:0004356: glutamate-ammonia ligase activity	1.12E-04
9	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.12E-04
10	GO:0102391: decanoate--CoA ligase activity	1.71E-04
11	GO:0004620: phospholipase activity	2.04E-04
12	GO:0004467: long-chain fatty acid-CoA ligase activity	2.04E-04
13	GO:0003872: 6-phosphofructokinase activity	2.04E-04
14	GO:0004630: phospholipase D activity	2.71E-04
15	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.71E-04
16	GO:0030234: enzyme regulator activity	3.81E-04
17	GO:0004177: aminopeptidase activity	4.19E-04
18	GO:0005524: ATP binding	4.88E-04
19	GO:0000287: magnesium ion binding	5.19E-04
20	GO:0043130: ubiquitin binding	6.66E-04
21	GO:0019706: protein-cysteine S-palmitoyltransferase activity	7.53E-04
22	GO:0008289: lipid binding	1.28E-03
23	GO:0005096: GTPase activator activity	1.85E-03
24	GO:0035091: phosphatidylinositol binding	2.62E-03
25	GO:0008026: ATP-dependent helicase activity	4.02E-03
26	GO:0008017: microtubule binding	5.79E-03
27	GO:0050660: flavin adenine dinucleotide binding	8.41E-03
28	GO:0003924: GTPase activity	1.16E-02
29	GO:0016301: kinase activity	1.20E-02
30	GO:0004674: protein serine/threonine kinase activity	1.59E-02
31	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.12E-02
32	GO:0005507: copper ion binding	2.24E-02
33	GO:0005525: GTP binding	2.48E-02
34	GO:0005509: calcium ion binding	2.72E-02
35	GO:0046872: metal ion binding	3.20E-02
36	GO:0016491: oxidoreductase activity	3.51E-02
37	GO:0004672: protein kinase activity	3.79E-02
38	GO:0003729: mRNA binding	3.83E-02

Rank	GO Term	Adjusted P value
1	GO:0071561: nucleus-vacuole junction	0.00E+00
2	GO:0005829: cytosol	2.36E-07
3	GO:0000138: Golgi trans cisterna	8.12E-06
4	GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I	8.12E-06
5	GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II	8.12E-06
6	GO:0030136: clathrin-coated vesicle	1.68E-05
7	GO:0005945: 6-phosphofructokinase complex	1.12E-04
8	GO:0000813: ESCRT I complex	1.12E-04
9	GO:0005737: cytoplasm	3.29E-04
10	GO:0008541: proteasome regulatory particle, lid subcomplex	4.19E-04
11	GO:0005769: early endosome	6.22E-04
12	GO:0005770: late endosome	1.03E-03
13	GO:0005643: nuclear pore	1.79E-03
14	GO:0031902: late endosome membrane	2.36E-03
15	GO:0005794: Golgi apparatus	2.67E-03
16	GO:0031966: mitochondrial membrane	2.90E-03
17	GO:0000502: proteasome complex	3.04E-03
18	GO:0005783: endoplasmic reticulum	3.93E-03
19	GO:0009524: phragmoplast	4.67E-03
20	GO:0005886: plasma membrane	7.03E-03
21	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	8.10E-03
22	GO:0005874: microtubule	8.61E-03
23	GO:0009506: plasmodesma	8.85E-03
24	GO:0022626: cytosolic ribosome	1.69E-02
25	GO:0005777: peroxisome	1.92E-02
26	GO:0005802: trans-Golgi network	2.44E-02
27	GO:0000139: Golgi membrane	3.58E-02