co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G06750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007638: mechanosensory behavior	0.00E+00
2	GO:0090393: sepal giant cell development	0.00E+00
3	GO:0015739: sialic acid transport	0.00E+00
4	GO:0033494: ferulate metabolic process	0.00E+00
5	GO:0010411: xyloglucan metabolic process	7.73E-06
6	GO:2000122: negative regulation of stomatal complex development	1.44E-05
7	GO:0010037: response to carbon dioxide	1.44E-05
8	GO:0015976: carbon utilization	1.44E-05
9	GO:0042546: cell wall biogenesis	2.87E-05
10	GO:0046520: sphingoid biosynthetic process	1.31E-04
11	GO:0071370: cellular response to gibberellin stimulus	1.31E-04
12	GO:1901599: (-)-pinoresinol biosynthetic process	1.31E-04
13	GO:0009773: photosynthetic electron transport in photosystem I	2.24E-04
14	GO:0009725: response to hormone	2.95E-04
15	GO:0015786: UDP-glucose transport	3.03E-04
16	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.03E-04
17	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.03E-04
18	GO:2000123: positive regulation of stomatal complex development	3.03E-04
19	GO:0006833: water transport	4.19E-04
20	GO:0071555: cell wall organization	4.98E-04
21	GO:0015783: GDP-fucose transport	4.99E-04
22	GO:0006000: fructose metabolic process	4.99E-04
23	GO:0006165: nucleoside diphosphate phosphorylation	7.14E-04
24	GO:0006228: UTP biosynthetic process	7.14E-04
25	GO:0006168: adenine salvage	7.14E-04
26	GO:0032877: positive regulation of DNA endoreduplication	7.14E-04
27	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	7.14E-04
28	GO:0006166: purine ribonucleoside salvage	7.14E-04
29	GO:0007231: osmosensory signaling pathway	7.14E-04
30	GO:0006241: CTP biosynthetic process	7.14E-04
31	GO:0072334: UDP-galactose transmembrane transport	7.14E-04
32	GO:0034220: ion transmembrane transport	8.42E-04
33	GO:0033500: carbohydrate homeostasis	9.47E-04
34	GO:2000038: regulation of stomatal complex development	9.47E-04
35	GO:0006546: glycine catabolic process	9.47E-04
36	GO:0019464: glycine decarboxylation via glycine cleavage system	9.47E-04
37	GO:0006183: GTP biosynthetic process	9.47E-04
38	GO:0006810: transport	1.06E-03
39	GO:0071554: cell wall organization or biogenesis	1.11E-03
40	GO:0005975: carbohydrate metabolic process	1.14E-03
41	GO:0006656: phosphatidylcholine biosynthetic process	1.20E-03
42	GO:0046785: microtubule polymerization	1.20E-03
43	GO:0044209: AMP salvage	1.20E-03
44	GO:0010375: stomatal complex patterning	1.20E-03
45	GO:0007267: cell-cell signaling	1.41E-03
46	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.47E-03
47	GO:0010405: arabinogalactan protein metabolic process	1.47E-03
48	GO:0006633: fatty acid biosynthetic process	1.48E-03
49	GO:0045926: negative regulation of growth	1.76E-03
50	GO:0009612: response to mechanical stimulus	1.76E-03
51	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.76E-03
52	GO:0009645: response to low light intensity stimulus	2.06E-03
53	GO:0050790: regulation of catalytic activity	2.06E-03
54	GO:0030497: fatty acid elongation	2.06E-03
55	GO:0010119: regulation of stomatal movement	2.37E-03
56	GO:0006402: mRNA catabolic process	2.39E-03
57	GO:0009850: auxin metabolic process	2.39E-03
58	GO:0007155: cell adhesion	2.39E-03
59	GO:0006002: fructose 6-phosphate metabolic process	2.73E-03
60	GO:0010206: photosystem II repair	3.08E-03
61	GO:0015780: nucleotide-sugar transport	3.08E-03
62	GO:0009744: response to sucrose	3.32E-03
63	GO:0008643: carbohydrate transport	3.59E-03
64	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.84E-03
65	GO:0043069: negative regulation of programmed cell death	3.84E-03
66	GO:0055085: transmembrane transport	4.07E-03
67	GO:0009807: lignan biosynthetic process	4.24E-03
68	GO:0043085: positive regulation of catalytic activity	4.24E-03
69	GO:1903507: negative regulation of nucleic acid-templated transcription	4.24E-03
70	GO:0000038: very long-chain fatty acid metabolic process	4.24E-03
71	GO:0006816: calcium ion transport	4.24E-03
72	GO:0015979: photosynthesis	4.50E-03
73	GO:0006857: oligopeptide transport	4.78E-03
74	GO:2000028: regulation of photoperiodism, flowering	5.08E-03
75	GO:0050826: response to freezing	5.08E-03
76	GO:0006094: gluconeogenesis	5.08E-03
77	GO:0005986: sucrose biosynthetic process	5.08E-03
78	GO:0019253: reductive pentose-phosphate cycle	5.52E-03
79	GO:0010143: cutin biosynthetic process	5.52E-03
80	GO:0005985: sucrose metabolic process	5.97E-03
81	GO:0070588: calcium ion transmembrane transport	5.97E-03
82	GO:0042545: cell wall modification	6.16E-03
83	GO:0010025: wax biosynthetic process	6.43E-03
84	GO:0006636: unsaturated fatty acid biosynthetic process	6.43E-03
85	GO:0009833: plant-type primary cell wall biogenesis	6.43E-03
86	GO:0009742: brassinosteroid mediated signaling pathway	6.73E-03
87	GO:0005992: trehalose biosynthetic process	6.91E-03
88	GO:0006487: protein N-linked glycosylation	6.91E-03
89	GO:0016998: cell wall macromolecule catabolic process	7.91E-03
90	GO:0061077: chaperone-mediated protein folding	7.91E-03
91	GO:2000022: regulation of jasmonic acid mediated signaling pathway	8.42E-03
92	GO:0019748: secondary metabolic process	8.42E-03
93	GO:0009294: DNA mediated transformation	8.95E-03
94	GO:0019722: calcium-mediated signaling	9.49E-03
95	GO:0042335: cuticle development	1.06E-02
96	GO:0080022: primary root development	1.06E-02
97	GO:0045490: pectin catabolic process	1.10E-02
98	GO:0006662: glycerol ether metabolic process	1.12E-02
99	GO:0009741: response to brassinosteroid	1.12E-02
100	GO:0019252: starch biosynthetic process	1.24E-02
101	GO:0016132: brassinosteroid biosynthetic process	1.30E-02
102	GO:0009617: response to bacterium	1.31E-02
103	GO:0010583: response to cyclopentenone	1.36E-02
104	GO:0010090: trichome morphogenesis	1.42E-02
105	GO:1901657: glycosyl compound metabolic process	1.42E-02
106	GO:0009826: unidimensional cell growth	1.64E-02
107	GO:0016126: sterol biosynthetic process	1.68E-02
108	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.75E-02
109	GO:0042128: nitrate assimilation	1.82E-02
110	GO:0007049: cell cycle	1.91E-02
111	GO:0009817: defense response to fungus, incompatible interaction	2.03E-02
112	GO:0018298: protein-chromophore linkage	2.03E-02
113	GO:0000160: phosphorelay signal transduction system	2.11E-02
114	GO:0010200: response to chitin	2.19E-02
115	GO:0009867: jasmonic acid mediated signaling pathway	2.41E-02
116	GO:0016051: carbohydrate biosynthetic process	2.41E-02
117	GO:0034599: cellular response to oxidative stress	2.48E-02
118	GO:0045454: cell redox homeostasis	2.53E-02
119	GO:0006631: fatty acid metabolic process	2.72E-02
120	GO:0009640: photomorphogenesis	2.88E-02
121	GO:0009414: response to water deprivation	3.05E-02
122	GO:0009644: response to high light intensity	3.05E-02
123	GO:0042742: defense response to bacterium	3.14E-02
124	GO:0006855: drug transmembrane transport	3.22E-02
125	GO:0031347: regulation of defense response	3.30E-02
126	GO:0009736: cytokinin-activated signaling pathway	3.56E-02
127	GO:0051603: proteolysis involved in cellular protein catabolic process	3.65E-02
128	GO:0048367: shoot system development	4.11E-02
129	GO:0009626: plant-type hypersensitive response	4.20E-02
130	GO:0006508: proteolysis	4.37E-02
131	GO:0009409: response to cold	4.56E-02
132	GO:0009624: response to nematode	4.58E-02
133	GO:0051726: regulation of cell cycle	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
2	GO:0015136: sialic acid transmembrane transporter activity	0.00E+00
3	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
4	GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity	0.00E+00
5	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.40E-06
6	GO:0016798: hydrolase activity, acting on glycosyl bonds	7.73E-06
7	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.95E-05
8	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	1.31E-04
9	GO:0004328: formamidase activity	1.31E-04
10	GO:0042349: guiding stereospecific synthesis activity	1.31E-04
11	GO:0000248: C-5 sterol desaturase activity	1.31E-04
12	GO:0000170: sphingosine hydroxylase activity	1.31E-04
13	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.31E-04
14	GO:0080132: fatty acid alpha-hydroxylase activity	1.31E-04
15	GO:0004089: carbonate dehydratase activity	2.95E-04
16	GO:0042284: sphingolipid delta-4 desaturase activity	3.03E-04
17	GO:0000234: phosphoethanolamine N-methyltransferase activity	3.03E-04
18	GO:0042389: omega-3 fatty acid desaturase activity	3.03E-04
19	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.03E-04
20	GO:0005457: GDP-fucose transmembrane transporter activity	4.99E-04
21	GO:0050734: hydroxycinnamoyltransferase activity	4.99E-04
22	GO:0003999: adenine phosphoribosyltransferase activity	7.14E-04
23	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	7.14E-04
24	GO:0005460: UDP-glucose transmembrane transporter activity	7.14E-04
25	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	7.14E-04
26	GO:0004550: nucleoside diphosphate kinase activity	7.14E-04
27	GO:0004375: glycine dehydrogenase (decarboxylating) activity	7.14E-04
28	GO:0030599: pectinesterase activity	7.87E-04
29	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	9.47E-04
30	GO:0019901: protein kinase binding	1.04E-03
31	GO:0004872: receptor activity	1.04E-03
32	GO:0009922: fatty acid elongase activity	1.20E-03
33	GO:0005459: UDP-galactose transmembrane transporter activity	1.20E-03
34	GO:0042578: phosphoric ester hydrolase activity	1.47E-03
35	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.47E-03
36	GO:0016413: O-acetyltransferase activity	1.49E-03
37	GO:0015250: water channel activity	1.58E-03
38	GO:0051753: mannan synthase activity	1.76E-03
39	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.06E-03
40	GO:0042802: identical protein binding	2.26E-03
41	GO:0004564: beta-fructofuranosidase activity	2.39E-03
42	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.73E-03
43	GO:0004185: serine-type carboxypeptidase activity	3.32E-03
44	GO:0004575: sucrose alpha-glucosidase activity	3.46E-03
45	GO:0004805: trehalose-phosphatase activity	3.84E-03
46	GO:0008047: enzyme activator activity	3.84E-03
47	GO:0004860: protein kinase inhibitor activity	4.24E-03
48	GO:0045330: aspartyl esterase activity	4.95E-03
49	GO:0005262: calcium channel activity	5.08E-03
50	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.52E-03
51	GO:0004650: polygalacturonase activity	5.80E-03
52	GO:0022857: transmembrane transporter activity	5.98E-03
53	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	6.43E-03
54	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	6.43E-03
55	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	6.43E-03
56	GO:0015035: protein disulfide oxidoreductase activity	6.54E-03
57	GO:0003714: transcription corepressor activity	6.91E-03
58	GO:0005528: FK506 binding	6.91E-03
59	GO:0043424: protein histidine kinase binding	7.40E-03
60	GO:0016758: transferase activity, transferring hexosyl groups	7.74E-03
61	GO:0022891: substrate-specific transmembrane transporter activity	8.95E-03
62	GO:0008514: organic anion transmembrane transporter activity	9.49E-03
63	GO:0005215: transporter activity	9.62E-03
64	GO:0047134: protein-disulfide reductase activity	1.00E-02
65	GO:0015297: antiporter activity	1.05E-02
66	GO:0004791: thioredoxin-disulfide reductase activity	1.18E-02
67	GO:0016491: oxidoreductase activity	1.25E-02
68	GO:0048038: quinone binding	1.30E-02
69	GO:0000156: phosphorelay response regulator activity	1.42E-02
70	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.42E-02
71	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.55E-02
72	GO:0016168: chlorophyll binding	1.75E-02
73	GO:0008375: acetylglucosaminyltransferase activity	1.82E-02
74	GO:0102483: scopolin beta-glucosidase activity	1.89E-02
75	GO:0008236: serine-type peptidase activity	1.96E-02
76	GO:0015238: drug transmembrane transporter activity	2.11E-02
77	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.18E-02
78	GO:0030145: manganese ion binding	2.25E-02
79	GO:0008422: beta-glucosidase activity	2.56E-02
80	GO:0005506: iron ion binding	3.08E-02
81	GO:0015293: symporter activity	3.13E-02
82	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.22E-02
83	GO:0003824: catalytic activity	3.53E-02
84	GO:0045735: nutrient reservoir activity	4.01E-02
85	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.11E-02
86	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.29E-02
87	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.29E-02
88	GO:0016746: transferase activity, transferring acyl groups	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0048046: apoplast	1.02E-10
2	GO:0005576: extracellular region	1.86E-05
3	GO:0005618: cell wall	4.81E-05
4	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.34E-04
5	GO:0009543: chloroplast thylakoid lumen	1.37E-04
6	GO:0031225: anchored component of membrane	2.89E-04
7	GO:0042170: plastid membrane	3.03E-04
8	GO:0009535: chloroplast thylakoid membrane	6.92E-04
9	GO:0005960: glycine cleavage complex	7.14E-04
10	GO:0005775: vacuolar lumen	7.14E-04
11	GO:0009505: plant-type cell wall	7.82E-04
12	GO:0046658: anchored component of plasma membrane	2.38E-03
13	GO:0009507: chloroplast	2.77E-03
14	GO:0016021: integral component of membrane	2.95E-03
15	GO:0031977: thylakoid lumen	3.07E-03
16	GO:0000139: Golgi membrane	3.50E-03
17	GO:0009579: thylakoid	3.72E-03
18	GO:0055028: cortical microtubule	3.84E-03
19	GO:0048471: perinuclear region of cytoplasm	4.24E-03
20	GO:0005789: endoplasmic reticulum membrane	4.33E-03
21	GO:0031012: extracellular matrix	5.08E-03
22	GO:0030095: chloroplast photosystem II	5.52E-03
23	GO:0005758: mitochondrial intermembrane space	6.91E-03
24	GO:0042651: thylakoid membrane	7.40E-03
25	GO:0009654: photosystem II oxygen evolving complex	7.40E-03
26	GO:0005887: integral component of plasma membrane	9.20E-03
27	GO:0009523: photosystem II	1.24E-02
28	GO:0019898: extrinsic component of membrane	1.24E-02
29	GO:0010319: stromule	1.55E-02
30	GO:0030529: intracellular ribonucleoprotein complex	1.68E-02
31	GO:0005886: plasma membrane	2.02E-02
32	GO:0000325: plant-type vacuole	2.25E-02
33	GO:0031902: late endosome membrane	2.72E-02
34	GO:0009941: chloroplast envelope	2.99E-02
35	GO:0016020: membrane	3.72E-02
36	GO:0009706: chloroplast inner membrane	4.58E-02