co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G06700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006412: translation	2.30E-93
2	GO:0042254: ribosome biogenesis	1.96E-41
3	GO:0000027: ribosomal large subunit assembly	4.56E-12
4	GO:0051131: chaperone-mediated protein complex assembly	3.77E-06
5	GO:0019877: diaminopimelate biosynthetic process	8.78E-05
6	GO:1990542: mitochondrial transmembrane transport	8.78E-05
7	GO:0030490: maturation of SSU-rRNA	8.78E-05
8	GO:0009735: response to cytokinin	1.82E-04
9	GO:0045041: protein import into mitochondrial intermembrane space	2.08E-04
10	GO:0009965: leaf morphogenesis	2.10E-04
11	GO:0061077: chaperone-mediated protein folding	3.29E-04
12	GO:0002181: cytoplasmic translation	3.48E-04
13	GO:0007005: mitochondrion organization	3.60E-04
14	GO:0006164: purine nucleotide biosynthetic process	5.01E-04
15	GO:0006986: response to unfolded protein	5.01E-04
16	GO:0051085: chaperone mediated protein folding requiring cofactor	5.01E-04
17	GO:0072334: UDP-galactose transmembrane transport	5.01E-04
18	GO:0071493: cellular response to UV-B	8.44E-04
19	GO:0042026: protein refolding	1.23E-03
20	GO:0006458: 'de novo' protein folding	1.23E-03
21	GO:0009955: adaxial/abaxial pattern specification	1.23E-03
22	GO:0000911: cytokinesis by cell plate formation	1.23E-03
23	GO:0000028: ribosomal small subunit assembly	1.66E-03
24	GO:0050821: protein stabilization	1.66E-03
25	GO:0030968: endoplasmic reticulum unfolded protein response	1.89E-03
26	GO:0008283: cell proliferation	1.94E-03
27	GO:0009644: response to high light intensity	2.10E-03
28	GO:0006189: 'de novo' IMP biosynthetic process	2.14E-03
29	GO:0000387: spliceosomal snRNP assembly	2.39E-03
30	GO:0090332: stomatal closure	2.39E-03
31	GO:0009089: lysine biosynthetic process via diaminopimelate	2.93E-03
32	GO:0010015: root morphogenesis	2.93E-03
33	GO:0006913: nucleocytoplasmic transport	2.93E-03
34	GO:0009408: response to heat	3.11E-03
35	GO:0010102: lateral root morphogenesis	3.50E-03
36	GO:0006626: protein targeting to mitochondrion	3.50E-03
37	GO:0010187: negative regulation of seed germination	4.74E-03
38	GO:0015992: proton transport	5.42E-03
39	GO:0032502: developmental process	9.24E-03
40	GO:0010090: trichome morphogenesis	9.67E-03
41	GO:0010286: heat acclimation	1.05E-02
42	GO:0009816: defense response to bacterium, incompatible interaction	1.19E-02
43	GO:0009853: photorespiration	1.63E-02
44	GO:0009409: response to cold	2.31E-02
45	GO:0009553: embryo sac development	3.04E-02
46	GO:0000398: mRNA splicing, via spliceosome	3.44E-02
47	GO:0006457: protein folding	4.14E-02
48	GO:0009793: embryo development ending in seed dormancy	4.48E-02
49	GO:0006414: translational elongation	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity	0.00E+00
2	GO:0003735: structural constituent of ribosome	7.43E-112
3	GO:0003729: mRNA binding	9.86E-23
4	GO:0019843: rRNA binding	2.42E-16
5	GO:0008097: 5S rRNA binding	3.77E-06
6	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	8.78E-05
7	GO:0008840: 4-hydroxy-tetrahydrodipicolinate synthase	8.78E-05
8	GO:0070181: small ribosomal subunit rRNA binding	3.48E-04
9	GO:0051082: unfolded protein binding	4.27E-04
10	GO:0005460: UDP-glucose transmembrane transporter activity	5.01E-04
11	GO:0017077: oxidative phosphorylation uncoupler activity	5.01E-04
12	GO:0005459: UDP-galactose transmembrane transporter activity	8.44E-04
13	GO:0044183: protein binding involved in protein folding	2.93E-03
14	GO:0051087: chaperone binding	5.07E-03
15	GO:0005507: copper ion binding	1.01E-02
16	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.38E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0022625: cytosolic large ribosomal subunit	1.83E-74
3	GO:0022626: cytosolic ribosome	3.19E-73
4	GO:0005840: ribosome	7.20E-70
5	GO:0022627: cytosolic small ribosomal subunit	8.03E-32
6	GO:0005737: cytoplasm	1.30E-27
7	GO:0005730: nucleolus	1.09E-20
8	GO:0015934: large ribosomal subunit	2.50E-15
9	GO:0005829: cytosol	1.13E-13
10	GO:0009506: plasmodesma	1.64E-13
11	GO:0005774: vacuolar membrane	1.48E-11
12	GO:0005773: vacuole	2.41E-06
13	GO:0016020: membrane	4.72E-06
14	GO:0005618: cell wall	5.02E-06
15	GO:0015935: small ribosomal subunit	1.01E-05
16	GO:0034719: SMN-Sm protein complex	3.48E-04
17	GO:0005682: U5 snRNP	6.66E-04
18	GO:0005687: U4 snRNP	8.44E-04
19	GO:0097526: spliceosomal tri-snRNP complex	8.44E-04
20	GO:0005689: U12-type spliceosomal complex	1.23E-03
21	GO:0030173: integral component of Golgi membrane	1.23E-03
22	GO:0071004: U2-type prespliceosome	1.66E-03
23	GO:0009507: chloroplast	1.93E-03
24	GO:0005763: mitochondrial small ribosomal subunit	2.14E-03
25	GO:0005685: U1 snRNP	2.14E-03
26	GO:0071011: precatalytic spliceosome	2.39E-03
27	GO:0005686: U2 snRNP	2.65E-03
28	GO:0071013: catalytic step 2 spliceosome	2.93E-03
29	GO:0019013: viral nucleocapsid	3.50E-03
30	GO:0030176: integral component of endoplasmic reticulum membrane	4.10E-03
31	GO:0005758: mitochondrial intermembrane space	4.74E-03
32	GO:0005759: mitochondrial matrix	5.78E-03
33	GO:0005886: plasma membrane	6.17E-03
34	GO:0005743: mitochondrial inner membrane	1.68E-02
35	GO:0005681: spliceosomal complex	2.72E-02
36	GO:0005732: small nucleolar ribonucleoprotein complex	3.30E-02