co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G06483

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090279: regulation of calcium ion import	0.00E+00
2	GO:0015717: triose phosphate transport	0.00E+00
3	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
4	GO:0071474: cellular hyperosmotic response	0.00E+00
5	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
6	GO:0010207: photosystem II assembly	5.53E-06
7	GO:0035304: regulation of protein dephosphorylation	2.19E-05
8	GO:0051262: protein tetramerization	2.19E-05
9	GO:0035436: triose phosphate transmembrane transport	3.99E-05
10	GO:1901000: regulation of response to salt stress	6.14E-05
11	GO:0030100: regulation of endocytosis	6.14E-05
12	GO:0009637: response to blue light	7.33E-05
13	GO:2000306: positive regulation of photomorphogenesis	8.58E-05
14	GO:0015713: phosphoglycerate transport	8.58E-05
15	GO:0006461: protein complex assembly	1.12E-04
16	GO:0006655: phosphatidylglycerol biosynthetic process	1.41E-04
17	GO:0009643: photosynthetic acclimation	1.41E-04
18	GO:0042549: photosystem II stabilization	1.41E-04
19	GO:0045962: positive regulation of development, heterochronic	1.41E-04
20	GO:0071470: cellular response to osmotic stress	1.71E-04
21	GO:0080186: developmental vegetative growth	2.04E-04
22	GO:0010196: nonphotochemical quenching	2.04E-04
23	GO:0010206: photosystem II repair	3.07E-04
24	GO:0010205: photoinhibition	3.43E-04
25	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.85E-04
26	GO:0019684: photosynthesis, light reaction	4.19E-04
27	GO:0016024: CDP-diacylglycerol biosynthetic process	4.58E-04
28	GO:0006289: nucleotide-excision repair	6.66E-04
29	GO:0009768: photosynthesis, light harvesting in photosystem I	7.09E-04
30	GO:0015979: photosynthesis	7.36E-04
31	GO:0008654: phospholipid biosynthetic process	1.13E-03
32	GO:0015995: chlorophyll biosynthetic process	1.67E-03
33	GO:0016311: dephosphorylation	1.73E-03
34	GO:0018298: protein-chromophore linkage	1.79E-03
35	GO:0010218: response to far red light	1.91E-03
36	GO:0010114: response to red light	2.49E-03
37	GO:0009965: leaf morphogenesis	2.69E-03
38	GO:0006413: translational initiation	5.35E-03
39	GO:0009658: chloroplast organization	7.59E-03
40	GO:0006970: response to osmotic stress	8.00E-03
41	GO:0009723: response to ethylene	8.41E-03
42	GO:0048366: leaf development	8.51E-03
43	GO:0044550: secondary metabolite biosynthetic process	9.35E-03
44	GO:0009651: response to salt stress	1.08E-02
45	GO:0032259: methylation	1.13E-02
46	GO:0055114: oxidation-reduction process	2.57E-02
47	GO:0042742: defense response to bacterium	2.88E-02
48	GO:0030154: cell differentiation	3.06E-02
49	GO:0009737: response to abscisic acid	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
2	GO:0005227: calcium activated cation channel activity	8.12E-06
3	GO:0010242: oxygen evolving activity	8.12E-06
4	GO:0071917: triose-phosphate transmembrane transporter activity	3.99E-05
5	GO:0070628: proteasome binding	8.58E-05
6	GO:0015120: phosphoglycerate transmembrane transporter activity	8.58E-05
7	GO:0031593: polyubiquitin binding	1.41E-04
8	GO:0004605: phosphatidate cytidylyltransferase activity	1.41E-04
9	GO:0005261: cation channel activity	1.71E-04
10	GO:0008266: poly(U) RNA binding	5.39E-04
11	GO:0031409: pigment binding	6.22E-04
12	GO:0043130: ubiquitin binding	6.66E-04
13	GO:0003684: damaged DNA binding	1.34E-03
14	GO:0016168: chlorophyll binding	1.56E-03
15	GO:0003993: acid phosphatase activity	2.16E-03
16	GO:0005506: iron ion binding	3.18E-03
17	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.58E-03
18	GO:0020037: heme binding	5.08E-03
19	GO:0015297: antiporter activity	5.44E-03
20	GO:0003743: translation initiation factor activity	6.25E-03
21	GO:0008168: methyltransferase activity	7.40E-03
22	GO:0004497: monooxygenase activity	8.82E-03
23	GO:0061630: ubiquitin protein ligase activity	9.14E-03
24	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.06E-02
25	GO:0005515: protein binding	1.28E-02
26	GO:0008289: lipid binding	1.47E-02
27	GO:0019825: oxygen binding	2.24E-02
28	GO:0005509: calcium ion binding	2.72E-02
29	GO:0046872: metal ion binding	3.20E-02

Rank	GO Term	Adjusted P value
1	GO:0009534: chloroplast thylakoid	3.27E-09
2	GO:0009783: photosystem II antenna complex	8.12E-06
3	GO:0016021: integral component of membrane	4.00E-05
4	GO:0009517: PSII associated light-harvesting complex II	8.58E-05
5	GO:0031977: thylakoid lumen	8.92E-05
6	GO:0009535: chloroplast thylakoid membrane	1.02E-04
7	GO:0055035: plastid thylakoid membrane	1.12E-04
8	GO:0005798: Golgi-associated vesicle	1.41E-04
9	GO:0009579: thylakoid	1.70E-04
10	GO:0009533: chloroplast stromal thylakoid	2.04E-04
11	GO:0010287: plastoglobule	2.36E-04
12	GO:0009543: chloroplast thylakoid lumen	2.49E-04
13	GO:0009941: chloroplast envelope	3.53E-04
14	GO:0030095: chloroplast photosystem II	5.39E-04
15	GO:0030076: light-harvesting complex	5.80E-04
16	GO:0005769: early endosome	6.22E-04
17	GO:0042651: thylakoid membrane	7.09E-04
18	GO:0009654: photosystem II oxygen evolving complex	7.09E-04
19	GO:0009522: photosystem I	1.08E-03
20	GO:0019898: extrinsic component of membrane	1.13E-03
21	GO:0009507: chloroplast	3.45E-03
22	GO:0016020: membrane	3.50E-03
23	GO:0009706: chloroplast inner membrane	3.86E-03
24	GO:0031969: chloroplast membrane	8.82E-03
25	GO:0009570: chloroplast stroma	2.12E-02
26	GO:0005783: endoplasmic reticulum	2.26E-02
27	GO:0005789: endoplasmic reticulum membrane	3.90E-02