co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G06150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0015976: carbon utilization	2.78E-07
4	GO:0042335: cuticle development	9.44E-06
5	GO:0010037: response to carbon dioxide	4.46E-05
6	GO:2000122: negative regulation of stomatal complex development	4.46E-05
7	GO:0010411: xyloglucan metabolic process	5.07E-05
8	GO:0032876: negative regulation of DNA endoreduplication	7.11E-05
9	GO:0045490: pectin catabolic process	1.69E-04
10	GO:0009645: response to low light intensity stimulus	1.88E-04
11	GO:0007155: cell adhesion	2.38E-04
12	GO:0071370: cellular response to gibberellin stimulus	2.55E-04
13	GO:0006723: cuticle hydrocarbon biosynthetic process	2.55E-04
14	GO:0042547: cell wall modification involved in multidimensional cell growth	2.55E-04
15	GO:0033481: galacturonate biosynthetic process	2.55E-04
16	GO:0042371: vitamin K biosynthetic process	2.55E-04
17	GO:0046520: sphingoid biosynthetic process	2.55E-04
18	GO:0042545: cell wall modification	4.24E-04
19	GO:0048829: root cap development	4.92E-04
20	GO:0060919: auxin influx	5.64E-04
21	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.64E-04
22	GO:0006695: cholesterol biosynthetic process	5.64E-04
23	GO:0000038: very long-chain fatty acid metabolic process	5.68E-04
24	GO:0009773: photosynthetic electron transport in photosystem I	5.68E-04
25	GO:0015979: photosynthesis	7.34E-04
26	GO:0010119: regulation of stomatal movement	7.84E-04
27	GO:0009416: response to light stimulus	8.08E-04
28	GO:0006633: fatty acid biosynthetic process	8.88E-04
29	GO:0043447: alkane biosynthetic process	9.15E-04
30	GO:0010025: wax biosynthetic process	1.03E-03
31	GO:0006833: water transport	1.03E-03
32	GO:0009768: photosynthesis, light harvesting in photosystem I	1.25E-03
33	GO:0042546: cell wall biogenesis	1.26E-03
34	GO:0009855: determination of bilateral symmetry	1.31E-03
35	GO:0006168: adenine salvage	1.31E-03
36	GO:0006166: purine ribonucleoside salvage	1.31E-03
37	GO:0007231: osmosensory signaling pathway	1.31E-03
38	GO:0051016: barbed-end actin filament capping	1.31E-03
39	GO:0003333: amino acid transmembrane transport	1.37E-03
40	GO:0006546: glycine catabolic process	1.75E-03
41	GO:0019464: glycine decarboxylation via glycine cleavage system	1.75E-03
42	GO:0033500: carbohydrate homeostasis	1.75E-03
43	GO:0031122: cytoplasmic microtubule organization	1.75E-03
44	GO:2000038: regulation of stomatal complex development	1.75E-03
45	GO:0019722: calcium-mediated signaling	1.77E-03
46	GO:0034220: ion transmembrane transport	2.07E-03
47	GO:0006810: transport	2.20E-03
48	GO:0044209: AMP salvage	2.23E-03
49	GO:0030308: negative regulation of cell growth	2.23E-03
50	GO:0006656: phosphatidylcholine biosynthetic process	2.23E-03
51	GO:0046785: microtubule polymerization	2.23E-03
52	GO:0010190: cytochrome b6f complex assembly	2.75E-03
53	GO:0006596: polyamine biosynthetic process	2.75E-03
54	GO:0048759: xylem vessel member cell differentiation	2.75E-03
55	GO:0016554: cytidine to uridine editing	2.75E-03
56	GO:0045962: positive regulation of development, heterochronic	2.75E-03
57	GO:0071554: cell wall organization or biogenesis	2.75E-03
58	GO:0000741: karyogamy	2.75E-03
59	GO:0010583: response to cyclopentenone	2.94E-03
60	GO:0010090: trichome morphogenesis	3.13E-03
61	GO:0071555: cell wall organization	3.25E-03
62	GO:0009612: response to mechanical stimulus	3.30E-03
63	GO:2000037: regulation of stomatal complex patterning	3.30E-03
64	GO:0009955: adaxial/abaxial pattern specification	3.30E-03
65	GO:0080060: integument development	3.30E-03
66	GO:0010014: meristem initiation	3.30E-03
67	GO:0042372: phylloquinone biosynthetic process	3.30E-03
68	GO:0045926: negative regulation of growth	3.30E-03
69	GO:0007267: cell-cell signaling	3.54E-03
70	GO:0030497: fatty acid elongation	3.89E-03
71	GO:0050829: defense response to Gram-negative bacterium	3.89E-03
72	GO:0016126: sterol biosynthetic process	3.97E-03
73	GO:0042128: nitrate assimilation	4.44E-03
74	GO:0009850: auxin metabolic process	4.52E-03
75	GO:0009690: cytokinin metabolic process	4.52E-03
76	GO:0045010: actin nucleation	4.52E-03
77	GO:0008610: lipid biosynthetic process	4.52E-03
78	GO:0006402: mRNA catabolic process	4.52E-03
79	GO:0030091: protein repair	4.52E-03
80	GO:0018298: protein-chromophore linkage	5.18E-03
81	GO:0007389: pattern specification process	5.18E-03
82	GO:0009932: cell tip growth	5.18E-03
83	GO:0033384: geranyl diphosphate biosynthetic process	5.86E-03
84	GO:0006754: ATP biosynthetic process	5.86E-03
85	GO:0000902: cell morphogenesis	5.86E-03
86	GO:0006098: pentose-phosphate shunt	5.86E-03
87	GO:0045337: farnesyl diphosphate biosynthetic process	5.86E-03
88	GO:0006865: amino acid transport	6.27E-03
89	GO:1900865: chloroplast RNA modification	6.58E-03
90	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.33E-03
91	GO:0006535: cysteine biosynthetic process from serine	7.33E-03
92	GO:0043069: negative regulation of programmed cell death	7.33E-03
93	GO:0019538: protein metabolic process	7.33E-03
94	GO:0009073: aromatic amino acid family biosynthetic process	8.11E-03
95	GO:1903507: negative regulation of nucleic acid-templated transcription	8.11E-03
96	GO:0006816: calcium ion transport	8.11E-03
97	GO:0019684: photosynthesis, light reaction	8.11E-03
98	GO:0010072: primary shoot apical meristem specification	8.11E-03
99	GO:0009089: lysine biosynthetic process via diaminopimelate	8.11E-03
100	GO:0009926: auxin polar transport	8.47E-03
101	GO:0008361: regulation of cell size	8.92E-03
102	GO:0006790: sulfur compound metabolic process	8.92E-03
103	GO:2000028: regulation of photoperiodism, flowering	9.75E-03
104	GO:0030036: actin cytoskeleton organization	9.75E-03
105	GO:0009725: response to hormone	9.75E-03
106	GO:0006094: gluconeogenesis	9.75E-03
107	GO:0010143: cutin biosynthetic process	1.06E-02
108	GO:0070588: calcium ion transmembrane transport	1.15E-02
109	GO:0046854: phosphatidylinositol phosphorylation	1.15E-02
110	GO:0009969: xyloglucan biosynthetic process	1.15E-02
111	GO:0009225: nucleotide-sugar metabolic process	1.15E-02
112	GO:0009825: multidimensional cell growth	1.15E-02
113	GO:0010167: response to nitrate	1.15E-02
114	GO:0005985: sucrose metabolic process	1.15E-02
115	GO:0051603: proteolysis involved in cellular protein catabolic process	1.18E-02
116	GO:0006857: oligopeptide transport	1.23E-02
117	GO:0006636: unsaturated fatty acid biosynthetic process	1.24E-02
118	GO:0006487: protein N-linked glycosylation	1.34E-02
119	GO:0019344: cysteine biosynthetic process	1.34E-02
120	GO:0009944: polarity specification of adaxial/abaxial axis	1.34E-02
121	GO:0000027: ribosomal large subunit assembly	1.34E-02
122	GO:0007017: microtubule-based process	1.43E-02
123	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.64E-02
124	GO:0080092: regulation of pollen tube growth	1.64E-02
125	GO:0009814: defense response, incompatible interaction	1.64E-02
126	GO:0055085: transmembrane transport	1.70E-02
127	GO:0009742: brassinosteroid mediated signaling pathway	1.73E-02
128	GO:0009294: DNA mediated transformation	1.74E-02
129	GO:0009409: response to cold	1.81E-02
130	GO:0006284: base-excision repair	1.85E-02
131	GO:0032259: methylation	1.95E-02
132	GO:0000271: polysaccharide biosynthetic process	2.07E-02
133	GO:0080022: primary root development	2.07E-02
134	GO:0010051: xylem and phloem pattern formation	2.07E-02
135	GO:0010087: phloem or xylem histogenesis	2.07E-02
136	GO:0042631: cellular response to water deprivation	2.07E-02
137	GO:0000226: microtubule cytoskeleton organization	2.07E-02
138	GO:0010197: polar nucleus fusion	2.18E-02
139	GO:0009741: response to brassinosteroid	2.18E-02
140	GO:0045489: pectin biosynthetic process	2.18E-02
141	GO:0006520: cellular amino acid metabolic process	2.18E-02
142	GO:0048235: pollen sperm cell differentiation	2.65E-02
143	GO:0032502: developmental process	2.65E-02
144	GO:0007264: small GTPase mediated signal transduction	2.65E-02
145	GO:1901657: glycosyl compound metabolic process	2.78E-02
146	GO:0007623: circadian rhythm	2.83E-02
147	GO:0007166: cell surface receptor signaling pathway	3.23E-02
148	GO:0009414: response to water deprivation	3.27E-02
149	GO:0001666: response to hypoxia	3.29E-02
150	GO:0010027: thylakoid membrane organization	3.29E-02
151	GO:0009617: response to bacterium	3.37E-02
152	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.42E-02
153	GO:0016311: dephosphorylation	3.83E-02
154	GO:0009817: defense response to fungus, incompatible interaction	3.97E-02
155	GO:0010311: lateral root formation	4.12E-02
156	GO:0000160: phosphorelay signal transduction system	4.12E-02
157	GO:0009826: unidimensional cell growth	4.20E-02
158	GO:0010218: response to far red light	4.26E-02
159	GO:0009407: toxin catabolic process	4.26E-02
160	GO:0016051: carbohydrate biosynthetic process	4.70E-02
161	GO:0009637: response to blue light	4.70E-02
162	GO:0009867: jasmonic acid mediated signaling pathway	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0050421: nitrite reductase (NO-forming) activity	0.00E+00
2	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
3	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
4	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
5	GO:0047889: ferredoxin-nitrate reductase activity	0.00E+00
6	GO:0010487: thermospermine synthase activity	0.00E+00
7	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
8	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
9	GO:0048307: ferredoxin-nitrite reductase activity	0.00E+00
10	GO:0004089: carbonate dehydratase activity	3.79E-05
11	GO:0010328: auxin influx transmembrane transporter activity	4.46E-05
12	GO:0030599: pectinesterase activity	4.61E-05
13	GO:0003838: sterol 24-C-methyltransferase activity	2.55E-04
14	GO:0016768: spermine synthase activity	2.55E-04
15	GO:0004328: formamidase activity	2.55E-04
16	GO:0000170: sphingosine hydroxylase activity	2.55E-04
17	GO:0030797: 24-methylenesterol C-methyltransferase activity	2.55E-04
18	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	2.55E-04
19	GO:0080132: fatty acid alpha-hydroxylase activity	2.55E-04
20	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	2.55E-04
21	GO:0008568: microtubule-severing ATPase activity	2.55E-04
22	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.86E-04
23	GO:0045330: aspartyl esterase activity	2.98E-04
24	GO:0016413: O-acetyltransferase activity	4.32E-04
25	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	5.64E-04
26	GO:0000234: phosphoethanolamine N-methyltransferase activity	5.64E-04
27	GO:0050017: L-3-cyanoalanine synthase activity	5.64E-04
28	GO:0042389: omega-3 fatty acid desaturase activity	5.64E-04
29	GO:0042284: sphingolipid delta-4 desaturase activity	5.64E-04
30	GO:0016798: hydrolase activity, acting on glycosyl bonds	5.73E-04
31	GO:0050734: hydroxycinnamoyltransferase activity	9.15E-04
32	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.03E-03
33	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.03E-03
34	GO:0031409: pigment binding	1.03E-03
35	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.03E-03
36	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.31E-03
37	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.31E-03
38	GO:0001872: (1->3)-beta-D-glucan binding	1.31E-03
39	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.31E-03
40	GO:0003999: adenine phosphoribosyltransferase activity	1.31E-03
41	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.39E-03
42	GO:0015293: symporter activity	1.39E-03
43	GO:0050378: UDP-glucuronate 4-epimerase activity	1.75E-03
44	GO:0004659: prenyltransferase activity	1.75E-03
45	GO:0008725: DNA-3-methyladenine glycosylase activity	2.23E-03
46	GO:0009922: fatty acid elongase activity	2.23E-03
47	GO:0016208: AMP binding	2.75E-03
48	GO:0004332: fructose-bisphosphate aldolase activity	2.75E-03
49	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.30E-03
50	GO:0004124: cysteine synthase activity	3.30E-03
51	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.30E-03
52	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.30E-03
53	GO:0051753: mannan synthase activity	3.30E-03
54	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.54E-03
55	GO:0004871: signal transducer activity	3.88E-03
56	GO:0003824: catalytic activity	3.91E-03
57	GO:0005215: transporter activity	3.97E-03
58	GO:0015250: water channel activity	3.97E-03
59	GO:0016168: chlorophyll binding	4.20E-03
60	GO:0004564: beta-fructofuranosidase activity	4.52E-03
61	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.18E-03
62	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	5.86E-03
63	GO:0004337: geranyltranstransferase activity	5.86E-03
64	GO:0004575: sucrose alpha-glucosidase activity	6.58E-03
65	GO:0046872: metal ion binding	8.05E-03
66	GO:0005089: Rho guanyl-nucleotide exchange factor activity	8.11E-03
67	GO:0004161: dimethylallyltranstransferase activity	8.11E-03
68	GO:0004185: serine-type carboxypeptidase activity	8.47E-03
69	GO:0008378: galactosyltransferase activity	8.92E-03
70	GO:0005262: calcium channel activity	9.75E-03
71	GO:0015171: amino acid transmembrane transporter activity	1.27E-02
72	GO:0004857: enzyme inhibitor activity	1.34E-02
73	GO:0003714: transcription corepressor activity	1.34E-02
74	GO:0043424: protein histidine kinase binding	1.43E-02
75	GO:0004650: polygalacturonase activity	1.49E-02
76	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.64E-02
77	GO:0016746: transferase activity, transferring acyl groups	1.68E-02
78	GO:0030570: pectate lyase activity	1.74E-02
79	GO:0008514: organic anion transmembrane transporter activity	1.85E-02
80	GO:0016758: transferase activity, transferring hexosyl groups	1.99E-02
81	GO:0001085: RNA polymerase II transcription factor binding	2.18E-02
82	GO:0004872: receptor activity	2.41E-02
83	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.64E-02
84	GO:0000156: phosphorelay response regulator activity	2.78E-02
85	GO:0051015: actin filament binding	2.78E-02
86	GO:0005200: structural constituent of cytoskeleton	3.03E-02
87	GO:0008375: acetylglucosaminyltransferase activity	3.56E-02
88	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.56E-02
89	GO:0016887: ATPase activity	3.56E-02
90	GO:0042802: identical protein binding	3.59E-02
91	GO:0030247: polysaccharide binding	3.70E-02
92	GO:0004683: calmodulin-dependent protein kinase activity	3.70E-02
93	GO:0102483: scopolin beta-glucosidase activity	3.70E-02
94	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.83E-02
95	GO:0016787: hydrolase activity	3.91E-02
96	GO:0015238: drug transmembrane transporter activity	4.12E-02
97	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.41E-02
98	GO:0003993: acid phosphatase activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0009505: plant-type cell wall	5.70E-08
2	GO:0005618: cell wall	5.56E-06
3	GO:0048046: apoplast	1.76E-05
4	GO:0009535: chloroplast thylakoid membrane	4.52E-05
5	GO:0009782: photosystem I antenna complex	2.55E-04
6	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.55E-04
7	GO:0005576: extracellular region	3.71E-04
8	GO:0009506: plasmodesma	4.33E-04
9	GO:0031225: anchored component of membrane	5.35E-04
10	GO:0042170: plastid membrane	5.64E-04
11	GO:0005886: plasma membrane	6.05E-04
12	GO:0030076: light-harvesting complex	9.26E-04
13	GO:0016020: membrane	1.23E-03
14	GO:0009654: photosystem II oxygen evolving complex	1.25E-03
15	GO:0005960: glycine cleavage complex	1.31E-03
16	GO:0005775: vacuolar lumen	1.31E-03
17	GO:0046658: anchored component of plasma membrane	1.56E-03
18	GO:0009941: chloroplast envelope	1.59E-03
19	GO:0009507: chloroplast	2.16E-03
20	GO:0019898: extrinsic component of membrane	2.57E-03
21	GO:0005794: Golgi apparatus	2.90E-03
22	GO:0045298: tubulin complex	5.86E-03
23	GO:0000139: Golgi membrane	5.90E-03
24	GO:0055028: cortical microtubule	7.33E-03
25	GO:0016021: integral component of membrane	7.36E-03
26	GO:0005789: endoplasmic reticulum membrane	7.47E-03
27	GO:0000311: plastid large ribosomal subunit	8.92E-03
28	GO:0030095: chloroplast photosystem II	1.06E-02
29	GO:0005875: microtubule associated complex	1.24E-02
30	GO:0005773: vacuole	1.42E-02
31	GO:0010287: plastoglobule	1.94E-02
32	GO:0009543: chloroplast thylakoid lumen	2.05E-02
33	GO:0009570: chloroplast stroma	2.28E-02
34	GO:0009522: photosystem I	2.29E-02
35	GO:0032580: Golgi cisterna membrane	2.90E-02
36	GO:0005887: integral component of plasma membrane	3.02E-02
37	GO:0005778: peroxisomal membrane	3.03E-02
38	GO:0010319: stromule	3.03E-02
39	GO:0030529: intracellular ribonucleoprotein complex	3.29E-02
40	GO:0005667: transcription factor complex	3.56E-02
41	GO:0000325: plant-type vacuole	4.41E-02