co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G06080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0060416: response to growth hormone	0.00E+00
2	GO:1901485: positive regulation of transcription factor catabolic process	0.00E+00
3	GO:0010583: response to cyclopentenone	1.39E-07
4	GO:0010411: xyloglucan metabolic process	1.59E-05
5	GO:0006833: water transport	2.64E-05
6	GO:0032876: negative regulation of DNA endoreduplication	3.58E-05
7	GO:0071555: cell wall organization	4.54E-05
8	GO:0042546: cell wall biogenesis	5.61E-05
9	GO:0034220: ion transmembrane transport	8.25E-05
10	GO:0042335: cuticle development	8.25E-05
11	GO:0071370: cellular response to gibberellin stimulus	1.69E-04
12	GO:0006723: cuticle hydrocarbon biosynthetic process	1.69E-04
13	GO:0016126: sterol biosynthetic process	2.14E-04
14	GO:0009416: response to light stimulus	2.36E-04
15	GO:0000038: very long-chain fatty acid metabolic process	3.19E-04
16	GO:0006633: fatty acid biosynthetic process	3.59E-04
17	GO:0007154: cell communication	3.83E-04
18	GO:0080148: negative regulation of response to water deprivation	3.83E-04
19	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.83E-04
20	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.83E-04
21	GO:0006695: cholesterol biosynthetic process	3.83E-04
22	GO:0060919: auxin influx	3.83E-04
23	GO:0010025: wax biosynthetic process	5.87E-04
24	GO:0033591: response to L-ascorbic acid	6.25E-04
25	GO:0006000: fructose metabolic process	6.25E-04
26	GO:0043447: alkane biosynthetic process	6.25E-04
27	GO:0006168: adenine salvage	8.93E-04
28	GO:1902476: chloride transmembrane transport	8.93E-04
29	GO:0006166: purine ribonucleoside salvage	8.93E-04
30	GO:0051016: barbed-end actin filament capping	8.93E-04
31	GO:2000122: negative regulation of stomatal complex development	1.18E-03
32	GO:0031122: cytoplasmic microtubule organization	1.18E-03
33	GO:2000038: regulation of stomatal complex development	1.18E-03
34	GO:0006546: glycine catabolic process	1.18E-03
35	GO:0010037: response to carbon dioxide	1.18E-03
36	GO:0015976: carbon utilization	1.18E-03
37	GO:0019464: glycine decarboxylation via glycine cleavage system	1.18E-03
38	GO:0006749: glutathione metabolic process	1.18E-03
39	GO:2000762: regulation of phenylpropanoid metabolic process	1.50E-03
40	GO:0044209: AMP salvage	1.50E-03
41	GO:0030308: negative regulation of cell growth	1.50E-03
42	GO:1900425: negative regulation of defense response to bacterium	1.85E-03
43	GO:0000741: karyogamy	1.85E-03
44	GO:0045926: negative regulation of growth	2.22E-03
45	GO:0009612: response to mechanical stimulus	2.22E-03
46	GO:2000037: regulation of stomatal complex patterning	2.22E-03
47	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.22E-03
48	GO:0040008: regulation of growth	2.45E-03
49	GO:0006821: chloride transport	2.61E-03
50	GO:0009645: response to low light intensity stimulus	2.61E-03
51	GO:0030497: fatty acid elongation	2.61E-03
52	GO:0006402: mRNA catabolic process	3.02E-03
53	GO:0009850: auxin metabolic process	3.02E-03
54	GO:0009704: de-etiolation	3.02E-03
55	GO:0045010: actin nucleation	3.02E-03
56	GO:0007155: cell adhesion	3.02E-03
57	GO:0008610: lipid biosynthetic process	3.02E-03
58	GO:0010119: regulation of stomatal movement	3.33E-03
59	GO:0009734: auxin-activated signaling pathway	3.40E-03
60	GO:0007389: pattern specification process	3.46E-03
61	GO:0009932: cell tip growth	3.46E-03
62	GO:0006002: fructose 6-phosphate metabolic process	3.46E-03
63	GO:0016051: carbohydrate biosynthetic process	3.65E-03
64	GO:0009414: response to water deprivation	3.66E-03
65	GO:0033384: geranyl diphosphate biosynthetic process	3.91E-03
66	GO:0000902: cell morphogenesis	3.91E-03
67	GO:0045337: farnesyl diphosphate biosynthetic process	3.91E-03
68	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.87E-03
69	GO:0043069: negative regulation of programmed cell death	4.87E-03
70	GO:0048829: root cap development	4.87E-03
71	GO:0019538: protein metabolic process	4.87E-03
72	GO:1903507: negative regulation of nucleic acid-templated transcription	5.38E-03
73	GO:0015706: nitrate transport	5.91E-03
74	GO:0008361: regulation of cell size	5.91E-03
75	GO:0006790: sulfur compound metabolic process	5.91E-03
76	GO:0080167: response to karrikin	5.93E-03
77	GO:2000028: regulation of photoperiodism, flowering	6.46E-03
78	GO:0030036: actin cytoskeleton organization	6.46E-03
79	GO:0009725: response to hormone	6.46E-03
80	GO:0006094: gluconeogenesis	6.46E-03
81	GO:0005986: sucrose biosynthetic process	6.46E-03
82	GO:0019253: reductive pentose-phosphate cycle	7.02E-03
83	GO:0006810: transport	7.47E-03
84	GO:0046854: phosphatidylinositol phosphorylation	7.60E-03
85	GO:0009825: multidimensional cell growth	7.60E-03
86	GO:0010167: response to nitrate	7.60E-03
87	GO:0005985: sucrose metabolic process	7.60E-03
88	GO:0005975: carbohydrate metabolic process	7.91E-03
89	GO:0042545: cell wall modification	8.73E-03
90	GO:0005992: trehalose biosynthetic process	8.81E-03
91	GO:0009742: brassinosteroid mediated signaling pathway	9.55E-03
92	GO:0003333: amino acid transmembrane transport	1.01E-02
93	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.08E-02
94	GO:0006284: base-excision repair	1.21E-02
95	GO:0019722: calcium-mediated signaling	1.21E-02
96	GO:0000271: polysaccharide biosynthetic process	1.36E-02
97	GO:0080022: primary root development	1.36E-02
98	GO:0010051: xylem and phloem pattern formation	1.36E-02
99	GO:0010087: phloem or xylem histogenesis	1.36E-02
100	GO:0042631: cellular response to water deprivation	1.36E-02
101	GO:0000226: microtubule cytoskeleton organization	1.36E-02
102	GO:0006520: cellular amino acid metabolic process	1.43E-02
103	GO:0010197: polar nucleus fusion	1.43E-02
104	GO:0009741: response to brassinosteroid	1.43E-02
105	GO:0045489: pectin biosynthetic process	1.43E-02
106	GO:0010305: leaf vascular tissue pattern formation	1.43E-02
107	GO:0045490: pectin catabolic process	1.56E-02
108	GO:0019252: starch biosynthetic process	1.58E-02
109	GO:0002229: defense response to oomycetes	1.66E-02
110	GO:0009733: response to auxin	1.67E-02
111	GO:0048235: pollen sperm cell differentiation	1.74E-02
112	GO:0007264: small GTPase mediated signal transduction	1.74E-02
113	GO:0007166: cell surface receptor signaling pathway	1.79E-02
114	GO:1901657: glycosyl compound metabolic process	1.82E-02
115	GO:0010090: trichome morphogenesis	1.82E-02
116	GO:0007267: cell-cell signaling	1.99E-02
117	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.24E-02
118	GO:0000160: phosphorelay signal transduction system	2.70E-02
119	GO:0010311: lateral root formation	2.70E-02
120	GO:0055085: transmembrane transport	2.72E-02
121	GO:0009407: toxin catabolic process	2.79E-02
122	GO:0048527: lateral root development	2.89E-02
123	GO:0007568: aging	2.89E-02
124	GO:0006865: amino acid transport	2.99E-02
125	GO:0009867: jasmonic acid mediated signaling pathway	3.08E-02
126	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.10E-02
127	GO:0006631: fatty acid metabolic process	3.49E-02
128	GO:0009926: auxin polar transport	3.69E-02
129	GO:0009744: response to sucrose	3.69E-02
130	GO:0008643: carbohydrate transport	3.91E-02
131	GO:0009636: response to toxic substance	4.01E-02
132	GO:0032259: methylation	4.23E-02
133	GO:0031347: regulation of defense response	4.23E-02
134	GO:0009736: cytokinin-activated signaling pathway	4.57E-02
135	GO:0051603: proteolysis involved in cellular protein catabolic process	4.68E-02
136	GO:0006857: oligopeptide transport	4.79E-02
137	GO:0009793: embryo development ending in seed dormancy	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
2	GO:0050613: delta14-sterol reductase activity	0.00E+00
3	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
4	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
5	GO:0016762: xyloglucan:xyloglucosyl transferase activity	5.08E-06
6	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.09E-05
7	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.59E-05
8	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	2.64E-05
9	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	2.64E-05
10	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	2.64E-05
11	GO:0009922: fatty acid elongase activity	3.58E-05
12	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	1.69E-04
13	GO:0008568: microtubule-severing ATPase activity	1.69E-04
14	GO:0003838: sterol 24-C-methyltransferase activity	1.69E-04
15	GO:0004328: formamidase activity	1.69E-04
16	GO:0030797: 24-methylenesterol C-methyltransferase activity	1.69E-04
17	GO:0008252: nucleotidase activity	1.69E-04
18	GO:0080132: fatty acid alpha-hydroxylase activity	1.69E-04
19	GO:0009671: nitrate:proton symporter activity	1.69E-04
20	GO:0015250: water channel activity	2.14E-04
21	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.83E-04
22	GO:0003999: adenine phosphoribosyltransferase activity	8.93E-04
23	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	8.93E-04
24	GO:0004375: glycine dehydrogenase (decarboxylating) activity	8.93E-04
25	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	8.93E-04
26	GO:0005253: anion channel activity	1.18E-03
27	GO:0010328: auxin influx transmembrane transporter activity	1.18E-03
28	GO:0008725: DNA-3-methyladenine glycosylase activity	1.50E-03
29	GO:0005247: voltage-gated chloride channel activity	1.85E-03
30	GO:0042578: phosphoric ester hydrolase activity	1.85E-03
31	GO:0016759: cellulose synthase activity	1.87E-03
32	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.22E-03
33	GO:0004564: beta-fructofuranosidase activity	3.02E-03
34	GO:0004337: geranyltranstransferase activity	3.91E-03
35	GO:0015112: nitrate transmembrane transporter activity	4.38E-03
36	GO:0004575: sucrose alpha-glucosidase activity	4.38E-03
37	GO:0004805: trehalose-phosphatase activity	4.87E-03
38	GO:0004161: dimethylallyltranstransferase activity	5.38E-03
39	GO:0004089: carbonate dehydratase activity	6.46E-03
40	GO:0045330: aspartyl esterase activity	7.00E-03
41	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.02E-03
42	GO:0030599: pectinesterase activity	8.47E-03
43	GO:0008134: transcription factor binding	8.81E-03
44	GO:0003714: transcription corepressor activity	8.81E-03
45	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.08E-02
46	GO:0016758: transferase activity, transferring hexosyl groups	1.10E-02
47	GO:0008514: organic anion transmembrane transporter activity	1.21E-02
48	GO:0008080: N-acetyltransferase activity	1.43E-02
49	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.45E-02
50	GO:0004872: receptor activity	1.58E-02
51	GO:0019901: protein kinase binding	1.58E-02
52	GO:0005215: transporter activity	1.63E-02
53	GO:0000156: phosphorelay response regulator activity	1.82E-02
54	GO:0051015: actin filament binding	1.82E-02
55	GO:0042802: identical protein binding	1.99E-02
56	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.99E-02
57	GO:0102483: scopolin beta-glucosidase activity	2.42E-02
58	GO:0030247: polysaccharide binding	2.42E-02
59	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.51E-02
60	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.79E-02
61	GO:0016757: transferase activity, transferring glycosyl groups	3.14E-02
62	GO:0003993: acid phosphatase activity	3.18E-02
63	GO:0008422: beta-glucosidase activity	3.28E-02
64	GO:0004364: glutathione transferase activity	3.59E-02
65	GO:0004185: serine-type carboxypeptidase activity	3.69E-02
66	GO:0042803: protein homodimerization activity	3.76E-02
67	GO:0004871: signal transducer activity	3.76E-02
68	GO:0015293: symporter activity	4.01E-02
69	GO:0015171: amino acid transmembrane transporter activity	4.91E-02
70	GO:0031625: ubiquitin protein ligase binding	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0009505: plant-type cell wall	2.01E-07
2	GO:0046658: anchored component of plasma membrane	8.92E-05
3	GO:0005576: extracellular region	1.13E-04
4	GO:0031225: anchored component of membrane	1.26E-04
5	GO:0048046: apoplast	4.55E-04
6	GO:0005618: cell wall	5.73E-04
7	GO:0005960: glycine cleavage complex	8.93E-04
8	GO:0005775: vacuolar lumen	8.93E-04
9	GO:0005886: plasma membrane	1.20E-03
10	GO:0034707: chloride channel complex	1.85E-03
11	GO:0005773: vacuole	3.50E-03
12	GO:0016021: integral component of membrane	4.80E-03
13	GO:0009506: plasmodesma	5.15E-03
14	GO:0048471: perinuclear region of cytoplasm	5.38E-03
15	GO:0000139: Golgi membrane	6.48E-03
16	GO:0030176: integral component of endoplasmic reticulum membrane	7.60E-03
17	GO:0005789: endoplasmic reticulum membrane	8.00E-03
18	GO:0005887: integral component of plasma membrane	1.44E-02
19	GO:0030529: intracellular ribonucleoprotein complex	2.16E-02
20	GO:0005794: Golgi apparatus	2.57E-02
21	GO:0000325: plant-type vacuole	2.89E-02
22	GO:0000786: nucleosome	2.99E-02
23	GO:0005774: vacuolar membrane	3.23E-02
24	GO:0031902: late endosome membrane	3.49E-02