Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G05660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010730: negative regulation of hydrogen peroxide biosynthetic process0.00E+00
2GO:0046473: phosphatidic acid metabolic process0.00E+00
3GO:0009409: response to cold1.05E-06
4GO:0009631: cold acclimation3.97E-06
5GO:0005983: starch catabolic process1.33E-05
6GO:0000025: maltose catabolic process1.77E-05
7GO:0009609: response to symbiotic bacterium1.77E-05
8GO:0050688: regulation of defense response to virus4.61E-05
9GO:0010353: response to trehalose4.61E-05
10GO:0007623: circadian rhythm5.07E-05
11GO:0009737: response to abscisic acid5.65E-05
12GO:0009911: positive regulation of flower development1.20E-04
13GO:0015743: malate transport1.69E-04
14GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain1.69E-04
15GO:0009637: response to blue light2.06E-04
16GO:0009616: virus induced gene silencing2.19E-04
17GO:0045040: protein import into mitochondrial outer membrane2.72E-04
18GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity3.27E-04
19GO:0045926: negative regulation of growth3.27E-04
20GO:0010555: response to mannitol3.27E-04
21GO:0042538: hyperosmotic salinity response3.37E-04
22GO:0009610: response to symbiotic fungus3.84E-04
23GO:0098869: cellular oxidant detoxification3.84E-04
24GO:0046470: phosphatidylcholine metabolic process3.84E-04
25GO:0010050: vegetative phase change3.84E-04
26GO:1902074: response to salt3.84E-04
27GO:0009819: drought recovery4.43E-04
28GO:0009415: response to water4.43E-04
29GO:0090333: regulation of stomatal closure5.68E-04
30GO:0010267: production of ta-siRNAs involved in RNA interference6.32E-04
31GO:2000280: regulation of root development6.32E-04
32GO:0005982: starch metabolic process6.32E-04
33GO:0009970: cellular response to sulfate starvation6.99E-04
34GO:0006995: cellular response to nitrogen starvation6.99E-04
35GO:0012501: programmed cell death8.38E-04
36GO:0010150: leaf senescence8.60E-04
37GO:0006626: protein targeting to mitochondrion9.08E-04
38GO:0006006: glucose metabolic process9.08E-04
39GO:0009414: response to water deprivation1.12E-03
40GO:0010025: wax biosynthetic process1.13E-03
41GO:0009269: response to desiccation1.37E-03
42GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.72E-03
43GO:0042631: cellular response to water deprivation1.81E-03
44GO:0000226: microtubule cytoskeleton organization1.81E-03
45GO:0000302: response to reactive oxygen species2.19E-03
46GO:0051607: defense response to virus2.70E-03
47GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.91E-03
48GO:0018298: protein-chromophore linkage3.36E-03
49GO:0006811: ion transport3.59E-03
50GO:0042542: response to hydrogen peroxide4.56E-03
51GO:0009644: response to high light intensity4.94E-03
52GO:0051726: regulation of cell cycle7.64E-03
53GO:0042744: hydrogen peroxide catabolic process9.39E-03
54GO:0016036: cellular response to phosphate starvation1.02E-02
55GO:0040008: regulation of growth1.04E-02
56GO:0006470: protein dephosphorylation1.18E-02
57GO:0010468: regulation of gene expression1.22E-02
58GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.39E-02
59GO:0006970: response to osmotic stress1.54E-02
60GO:0007049: cell cycle1.58E-02
61GO:0016042: lipid catabolic process2.20E-02
62GO:0050832: defense response to fungus2.48E-02
63GO:0009651: response to salt stress2.80E-02
64GO:0009908: flower development3.15E-02
65GO:0009738: abscisic acid-activated signaling pathway3.31E-02
66GO:0009416: response to light stimulus3.39E-02
67GO:0009611: response to wounding3.44E-02
68GO:0051301: cell division3.60E-02
69GO:0045893: positive regulation of transcription, DNA-templated3.74E-02
70GO:0006511: ubiquitin-dependent protein catabolic process4.21E-02
71GO:0006355: regulation of transcription, DNA-templated4.35E-02
RankGO TermAdjusted P value
1GO:0050521: alpha-glucan, water dikinase activity1.77E-05
2GO:0005534: galactose binding1.77E-05
3GO:0004134: 4-alpha-glucanotransferase activity1.77E-05
4GO:0001047: core promoter binding4.61E-05
5GO:0004096: catalase activity8.18E-05
6GO:0005253: anion channel activity1.69E-04
7GO:2001070: starch binding2.72E-04
8GO:0000293: ferric-chelate reductase activity2.72E-04
9GO:0009881: photoreceptor activity3.84E-04
10GO:0015140: malate transmembrane transporter activity3.84E-04
11GO:0004630: phospholipase D activity5.05E-04
12GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity5.05E-04
13GO:0005515: protein binding9.87E-04
14GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity1.90E-03
15GO:0004722: protein serine/threonine phosphatase activity2.09E-03
16GO:0008375: acetylglucosaminyltransferase activity3.02E-03
17GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.36E-03
18GO:0004693: cyclin-dependent protein serine/threonine kinase activity3.59E-03
19GO:0050897: cobalt ion binding3.70E-03
20GO:0005509: calcium ion binding7.65E-03
21GO:0003824: catalytic activity9.11E-03
22GO:0008289: lipid binding2.85E-02
23GO:0043565: sequence-specific DNA binding4.26E-02
RankGO TermAdjusted P value
1GO:0043036: starch grain4.61E-05
2GO:0015630: microtubule cytoskeleton1.23E-04
3GO:0005655: nucleolar ribonuclease P complex3.27E-04
4GO:0009501: amyloplast4.43E-04
5GO:0000307: cyclin-dependent protein kinase holoenzyme complex5.05E-04
6GO:0005742: mitochondrial outer membrane translocase complex5.05E-04
7GO:0048471: perinuclear region of cytoplasm7.68E-04
8GO:0005741: mitochondrial outer membrane1.37E-03
9GO:0005744: mitochondrial inner membrane presequence translocase complex1.63E-03
10GO:0031966: mitochondrial membrane5.48E-03
11GO:0009941: chloroplast envelope8.12E-03
12GO:0009705: plant-type vacuole membrane1.08E-02
13GO:0009570: chloroplast stroma1.24E-02
14GO:0005783: endoplasmic reticulum1.34E-02
15GO:0016021: integral component of membrane1.78E-02
16GO:0005743: mitochondrial inner membrane2.14E-02
17GO:0022626: cytosolic ribosome3.28E-02
18GO:0005777: peroxisome3.74E-02
19GO:0005773: vacuole4.42E-02
Gene type



Gene DE type