co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G05090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033587: shikimate biosynthetic process	0.00E+00
2	GO:0070291: N-acylethanolamine metabolic process	0.00E+00
3	GO:0000188: inactivation of MAPK activity	0.00E+00
4	GO:0010241: ent-kaurene oxidation to kaurenoic acid	0.00E+00
5	GO:0009991: response to extracellular stimulus	0.00E+00
6	GO:0048227: plasma membrane to endosome transport	0.00E+00
7	GO:0035278: miRNA mediated inhibition of translation	0.00E+00
8	GO:0008202: steroid metabolic process	8.37E-05
9	GO:0098721: uracil import across plasma membrane	8.43E-05
10	GO:0098702: adenine import across plasma membrane	8.43E-05
11	GO:0046167: glycerol-3-phosphate biosynthetic process	8.43E-05
12	GO:0098710: guanine import across plasma membrane	8.43E-05
13	GO:0035344: hypoxanthine transport	8.43E-05
14	GO:0002237: response to molecule of bacterial origin	1.80E-04
15	GO:0042325: regulation of phosphorylation	2.00E-04
16	GO:0090156: cellular sphingolipid homeostasis	2.00E-04
17	GO:0006641: triglyceride metabolic process	2.00E-04
18	GO:0006212: uracil catabolic process	2.00E-04
19	GO:0007584: response to nutrient	2.00E-04
20	GO:0052542: defense response by callose deposition	2.00E-04
21	GO:0051258: protein polymerization	2.00E-04
22	GO:0009727: detection of ethylene stimulus	2.00E-04
23	GO:0019483: beta-alanine biosynthetic process	2.00E-04
24	GO:0015865: purine nucleotide transport	2.00E-04
25	GO:0000162: tryptophan biosynthetic process	2.29E-04
26	GO:0048367: shoot system development	3.26E-04
27	GO:1900140: regulation of seedling development	3.35E-04
28	GO:0061158: 3'-UTR-mediated mRNA destabilization	3.35E-04
29	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	3.35E-04
30	GO:0019563: glycerol catabolic process	3.35E-04
31	GO:0009651: response to salt stress	4.30E-04
32	GO:2000114: regulation of establishment of cell polarity	4.84E-04
33	GO:0048194: Golgi vesicle budding	4.84E-04
34	GO:1901000: regulation of response to salt stress	4.84E-04
35	GO:0046902: regulation of mitochondrial membrane permeability	4.84E-04
36	GO:0006072: glycerol-3-phosphate metabolic process	4.84E-04
37	GO:0072583: clathrin-dependent endocytosis	4.84E-04
38	GO:0048364: root development	5.10E-04
39	GO:0006635: fatty acid beta-oxidation	6.25E-04
40	GO:0010188: response to microbial phytotoxin	6.44E-04
41	GO:0010600: regulation of auxin biosynthetic process	6.44E-04
42	GO:0045723: positive regulation of fatty acid biosynthetic process	6.44E-04
43	GO:0010107: potassium ion import	6.44E-04
44	GO:0010225: response to UV-C	8.14E-04
45	GO:0030308: negative regulation of cell growth	8.14E-04
46	GO:0050665: hydrogen peroxide biosynthetic process	9.94E-04
47	GO:1900425: negative regulation of defense response to bacterium	9.94E-04
48	GO:0010337: regulation of salicylic acid metabolic process	9.94E-04
49	GO:0006368: transcription elongation from RNA polymerase II promoter	1.39E-03
50	GO:0006955: immune response	1.39E-03
51	GO:0046470: phosphatidylcholine metabolic process	1.39E-03
52	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.39E-03
53	GO:0071669: plant-type cell wall organization or biogenesis	1.39E-03
54	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.39E-03
55	GO:0009690: cytokinin metabolic process	1.60E-03
56	GO:0006605: protein targeting	1.60E-03
57	GO:0016559: peroxisome fission	1.60E-03
58	GO:0009819: drought recovery	1.60E-03
59	GO:1900150: regulation of defense response to fungus	1.60E-03
60	GO:0048766: root hair initiation	1.60E-03
61	GO:0009723: response to ethylene	1.63E-03
62	GO:0030968: endoplasmic reticulum unfolded protein response	1.83E-03
63	GO:0043562: cellular response to nitrogen levels	1.83E-03
64	GO:0009808: lignin metabolic process	1.83E-03
65	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.85E-03
66	GO:0007338: single fertilization	2.06E-03
67	GO:0006098: pentose-phosphate shunt	2.06E-03
68	GO:2000280: regulation of root development	2.30E-03
69	GO:0006869: lipid transport	2.50E-03
70	GO:0007064: mitotic sister chromatid cohesion	2.56E-03
71	GO:0006535: cysteine biosynthetic process from serine	2.56E-03
72	GO:0006468: protein phosphorylation	2.69E-03
73	GO:0052544: defense response by callose deposition in cell wall	2.82E-03
74	GO:0072593: reactive oxygen species metabolic process	2.82E-03
75	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.09E-03
76	GO:0000266: mitochondrial fission	3.09E-03
77	GO:0042742: defense response to bacterium	3.29E-03
78	GO:0009887: animal organ morphogenesis	3.66E-03
79	GO:0007031: peroxisome organization	3.95E-03
80	GO:0019344: cysteine biosynthetic process	4.57E-03
81	GO:0001944: vasculature development	5.89E-03
82	GO:0009625: response to insect	5.89E-03
83	GO:0009686: gibberellin biosynthetic process	5.89E-03
84	GO:0000271: polysaccharide biosynthetic process	6.97E-03
85	GO:0010118: stomatal movement	6.97E-03
86	GO:0009617: response to bacterium	7.18E-03
87	GO:0010182: sugar mediated signaling pathway	7.34E-03
88	GO:0010154: fruit development	7.34E-03
89	GO:0009851: auxin biosynthetic process	8.10E-03
90	GO:0007264: small GTPase mediated signal transduction	8.90E-03
91	GO:0010583: response to cyclopentenone	8.90E-03
92	GO:0030163: protein catabolic process	9.30E-03
93	GO:0071281: cellular response to iron ion	9.30E-03
94	GO:0006914: autophagy	9.72E-03
95	GO:0009567: double fertilization forming a zygote and endosperm	9.72E-03
96	GO:0006970: response to osmotic stress	1.00E-02
97	GO:0071805: potassium ion transmembrane transport	1.01E-02
98	GO:0006904: vesicle docking involved in exocytosis	1.01E-02
99	GO:0051607: defense response to virus	1.06E-02
100	GO:0016579: protein deubiquitination	1.06E-02
101	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.14E-02
102	GO:0080167: response to karrikin	1.16E-02
103	GO:0006950: response to stress	1.23E-02
104	GO:0008219: cell death	1.33E-02
105	GO:0009817: defense response to fungus, incompatible interaction	1.33E-02
106	GO:0030244: cellulose biosynthetic process	1.33E-02
107	GO:0009832: plant-type cell wall biogenesis	1.37E-02
108	GO:0048767: root hair elongation	1.37E-02
109	GO:0010311: lateral root formation	1.37E-02
110	GO:0010043: response to zinc ion	1.47E-02
111	GO:0048527: lateral root development	1.47E-02
112	GO:0010119: regulation of stomatal movement	1.47E-02
113	GO:0006865: amino acid transport	1.52E-02
114	GO:0009867: jasmonic acid mediated signaling pathway	1.57E-02
115	GO:0045087: innate immune response	1.57E-02
116	GO:0034599: cellular response to oxidative stress	1.62E-02
117	GO:0006099: tricarboxylic acid cycle	1.62E-02
118	GO:0006839: mitochondrial transport	1.72E-02
119	GO:0006887: exocytosis	1.77E-02
120	GO:0006631: fatty acid metabolic process	1.77E-02
121	GO:0008283: cell proliferation	1.88E-02
122	GO:0031347: regulation of defense response	2.15E-02
123	GO:0009809: lignin biosynthetic process	2.32E-02
124	GO:0006813: potassium ion transport	2.32E-02
125	GO:0010224: response to UV-B	2.38E-02
126	GO:0046686: response to cadmium ion	2.57E-02
127	GO:0006096: glycolytic process	2.62E-02
128	GO:0009626: plant-type hypersensitive response	2.74E-02
129	GO:0009740: gibberellic acid mediated signaling pathway	2.86E-02
130	GO:0009738: abscisic acid-activated signaling pathway	2.94E-02
131	GO:0009611: response to wounding	3.10E-02
132	GO:0009742: brassinosteroid mediated signaling pathway	3.11E-02
133	GO:0035556: intracellular signal transduction	3.20E-02
134	GO:0009845: seed germination	3.70E-02
135	GO:0009737: response to abscisic acid	3.79E-02
136	GO:0055085: transmembrane transport	3.85E-02
137	GO:0009790: embryo development	3.91E-02
138	GO:0006633: fatty acid biosynthetic process	4.12E-02
139	GO:0006952: defense response	4.27E-02
140	GO:0010150: leaf senescence	4.40E-02
141	GO:0009739: response to gibberellin	4.77E-02
142	GO:0006470: protein dephosphorylation	4.84E-02
143	GO:0010468: regulation of gene expression	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0102077: oleamide hydrolase activity	0.00E+00
2	GO:0004370: glycerol kinase activity	0.00E+00
3	GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity	0.00E+00
4	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
5	GO:0005548: phospholipid transporter activity	0.00E+00
6	GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity	0.00E+00
7	GO:0052616: ent-kaur-16-en-19-ol oxidase activity	0.00E+00
8	GO:0052617: ent-kaur-16-en-19-al oxidase activity	0.00E+00
9	GO:0052615: ent-kaurene oxidase activity	0.00E+00
10	GO:0103073: anandamide amidohydrolase activity	0.00E+00
11	GO:0008142: oxysterol binding	5.54E-05
12	GO:0015207: adenine transmembrane transporter activity	8.43E-05
13	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	8.43E-05
14	GO:0015208: guanine transmembrane transporter activity	8.43E-05
15	GO:0015294: solute:cation symporter activity	8.43E-05
16	GO:0019200: carbohydrate kinase activity	2.00E-04
17	GO:0017040: ceramidase activity	2.00E-04
18	GO:0038199: ethylene receptor activity	2.00E-04
19	GO:0032934: sterol binding	2.00E-04
20	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	2.00E-04
21	GO:0004142: diacylglycerol cholinephosphotransferase activity	2.00E-04
22	GO:0004383: guanylate cyclase activity	3.35E-04
23	GO:0016805: dipeptidase activity	3.35E-04
24	GO:0016595: glutamate binding	3.35E-04
25	GO:0004049: anthranilate synthase activity	3.35E-04
26	GO:0005093: Rab GDP-dissociation inhibitor activity	3.35E-04
27	GO:0005047: signal recognition particle binding	3.35E-04
28	GO:0051740: ethylene binding	4.84E-04
29	GO:0004300: enoyl-CoA hydratase activity	4.84E-04
30	GO:0001653: peptide receptor activity	4.84E-04
31	GO:0004108: citrate (Si)-synthase activity	4.84E-04
32	GO:0004834: tryptophan synthase activity	6.44E-04
33	GO:0015210: uracil transmembrane transporter activity	6.44E-04
34	GO:0005496: steroid binding	8.14E-04
35	GO:0005471: ATP:ADP antiporter activity	8.14E-04
36	GO:0004040: amidase activity	8.14E-04
37	GO:0004124: cysteine synthase activity	1.18E-03
38	GO:0102391: decanoate--CoA ligase activity	1.18E-03
39	GO:0004012: phospholipid-translocating ATPase activity	1.18E-03
40	GO:0051753: mannan synthase activity	1.18E-03
41	GO:0004467: long-chain fatty acid-CoA ligase activity	1.39E-03
42	GO:0008235: metalloexopeptidase activity	1.39E-03
43	GO:0005267: potassium channel activity	1.83E-03
44	GO:0016301: kinase activity	1.89E-03
45	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.06E-03
46	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	2.06E-03
47	GO:0031490: chromatin DNA binding	2.30E-03
48	GO:0030955: potassium ion binding	2.30E-03
49	GO:0004743: pyruvate kinase activity	2.30E-03
50	GO:0004673: protein histidine kinase activity	2.56E-03
51	GO:0004713: protein tyrosine kinase activity	2.56E-03
52	GO:0004177: aminopeptidase activity	2.82E-03
53	GO:0003924: GTPase activity	2.90E-03
54	GO:0004022: alcohol dehydrogenase (NAD) activity	3.37E-03
55	GO:0000155: phosphorelay sensor kinase activity	3.37E-03
56	GO:0019888: protein phosphatase regulator activity	3.37E-03
57	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.37E-03
58	GO:0004674: protein serine/threonine kinase activity	3.46E-03
59	GO:0004175: endopeptidase activity	3.66E-03
60	GO:0004190: aspartic-type endopeptidase activity	3.95E-03
61	GO:0004725: protein tyrosine phosphatase activity	4.26E-03
62	GO:0043130: ubiquitin binding	4.57E-03
63	GO:0015079: potassium ion transmembrane transporter activity	4.89E-03
64	GO:0005524: ATP binding	5.01E-03
65	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	5.22E-03
66	GO:0016760: cellulose synthase (UDP-forming) activity	5.89E-03
67	GO:0003727: single-stranded RNA binding	6.24E-03
68	GO:0003713: transcription coactivator activity	7.34E-03
69	GO:0030276: clathrin binding	7.34E-03
70	GO:0042802: identical protein binding	7.64E-03
71	GO:0004843: thiol-dependent ubiquitin-specific protease activity	8.50E-03
72	GO:0000287: magnesium ion binding	9.13E-03
73	GO:0000156: phosphorelay response regulator activity	9.30E-03
74	GO:0016759: cellulose synthase activity	9.72E-03
75	GO:0005515: protein binding	1.24E-02
76	GO:0005096: GTPase activator activity	1.37E-02
77	GO:0004871: signal transducer activity	1.45E-02
78	GO:0030145: manganese ion binding	1.47E-02
79	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.67E-02
80	GO:0004672: protein kinase activity	2.39E-02
81	GO:0015171: amino acid transmembrane transporter activity	2.50E-02
82	GO:0022857: transmembrane transporter activity	2.86E-02
83	GO:0030170: pyridoxal phosphate binding	3.77E-02
84	GO:0005516: calmodulin binding	4.55E-02
85	GO:0008017: microtubule binding	4.55E-02
86	GO:0005525: GTP binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0070449: elongin complex	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0005783: endoplasmic reticulum	3.85E-05
4	GO:0045334: clathrin-coated endocytic vesicle	8.43E-05
5	GO:0005950: anthranilate synthase complex	2.00E-04
6	GO:0016021: integral component of membrane	2.37E-04
7	GO:0005773: vacuole	3.33E-04
8	GO:0005886: plasma membrane	5.72E-04
9	GO:0030173: integral component of Golgi membrane	1.18E-03
10	GO:0005829: cytosol	1.61E-03
11	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.83E-03
12	GO:0005779: integral component of peroxisomal membrane	1.83E-03
13	GO:0005789: endoplasmic reticulum membrane	6.26E-03
14	GO:0005777: peroxisome	7.16E-03
15	GO:0009504: cell plate	8.10E-03
16	GO:0000145: exocyst	8.90E-03
17	GO:0005778: peroxisomal membrane	1.01E-02
18	GO:0005802: trans-Golgi network	1.09E-02
19	GO:0000932: P-body	1.10E-02
20	GO:0005768: endosome	1.29E-02
21	GO:0009707: chloroplast outer membrane	1.33E-02
22	GO:0005743: mitochondrial inner membrane	1.59E-02
23	GO:0005794: Golgi apparatus	1.63E-02
24	GO:0009570: chloroplast stroma	1.88E-02
25	GO:0009536: plastid	1.91E-02
26	GO:0010008: endosome membrane	2.68E-02
27	GO:0005834: heterotrimeric G-protein complex	2.74E-02
28	GO:0005623: cell	3.57E-02
29	GO:0005737: cytoplasm	4.34E-02