Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G04840

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006412: translation3.00E-68
2GO:0042254: ribosome biogenesis2.50E-29
3GO:0000027: ribosomal large subunit assembly8.25E-09
4GO:0009735: response to cytokinin1.89E-05
5GO:0030490: maturation of SSU-rRNA4.04E-05
6GO:0009967: positive regulation of signal transduction1.00E-04
7GO:1902626: assembly of large subunit precursor of preribosome1.73E-04
8GO:0002181: cytoplasmic translation1.73E-04
9GO:0042274: ribosomal small subunit biogenesis3.43E-04
10GO:0000911: cytokinesis by cell plate formation6.40E-04
11GO:0009955: adaxial/abaxial pattern specification6.40E-04
12GO:0009644: response to high light intensity7.93E-04
13GO:0009965: leaf morphogenesis8.22E-04
14GO:0000028: ribosomal small subunit assembly8.61E-04
15GO:0009409: response to cold1.19E-03
16GO:0006913: nucleocytoplasmic transport1.49E-03
17GO:0010015: root morphogenesis1.49E-03
18GO:0045037: protein import into chloroplast stroma1.63E-03
19GO:0071215: cellular response to abscisic acid stimulus3.06E-03
20GO:0040007: growth3.06E-03
21GO:0010090: trichome morphogenesis4.79E-03
22GO:0008283: cell proliferation9.53E-03
23GO:0006364: rRNA processing1.18E-02
24GO:0006417: regulation of translation1.26E-02
25GO:0048367: shoot system development1.35E-02
26GO:0000398: mRNA splicing, via spliceosome1.67E-02
27GO:0009845: seed germination1.87E-02
28GO:0006979: response to oxidative stress2.37E-02
29GO:0009658: chloroplast organization3.04E-02
30GO:0048364: root development4.81E-02
RankGO TermAdjusted P value
1GO:0003735: structural constituent of ribosome5.69E-83
2GO:0003729: mRNA binding2.80E-19
3GO:0019843: rRNA binding4.66E-11
4GO:0005078: MAP-kinase scaffold activity1.00E-04
5GO:0070181: small ribosomal subunit rRNA binding1.73E-04
6GO:0008097: 5S rRNA binding2.55E-04
7GO:0004871: signal transducer activity4.16E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome8.97E-56
2GO:0022625: cytosolic large ribosomal subunit4.27E-54
3GO:0005840: ribosome1.25E-52
4GO:0005730: nucleolus7.29E-24
5GO:0022627: cytosolic small ribosomal subunit1.61E-23
6GO:0005737: cytoplasm1.99E-19
7GO:0005829: cytosol2.50E-11
8GO:0015934: large ribosomal subunit5.41E-11
9GO:0016020: membrane1.12E-10
10GO:0009506: plasmodesma8.34E-10
11GO:0005773: vacuole1.75E-06
12GO:0005774: vacuolar membrane3.50E-05
13GO:0009507: chloroplast2.44E-04
14GO:0005618: cell wall3.11E-04
15GO:0031897: Tic complex3.43E-04
16GO:0005682: U5 snRNP3.43E-04
17GO:0005687: U4 snRNP4.37E-04
18GO:0005622: intracellular6.23E-04
19GO:0071004: U2-type prespliceosome8.61E-04
20GO:0046540: U4/U6 x U5 tri-snRNP complex9.77E-04
21GO:0005685: U1 snRNP1.10E-03
22GO:0015030: Cajal body1.22E-03
23GO:0005686: U2 snRNP1.35E-03
24GO:0071013: catalytic step 2 spliceosome1.49E-03
25GO:0019013: viral nucleocapsid1.77E-03
26GO:0015935: small ribosomal subunit2.72E-03
27GO:0005732: small nucleolar ribonucleoprotein complex1.60E-02
28GO:0005654: nucleoplasm1.74E-02
29GO:0005886: plasma membrane1.84E-02
Gene type



Gene DE type