GO Enrichment Analysis of Co-expressed Genes with
AT3G04720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033587: shikimate biosynthetic process | 0.00E+00 |
| 2 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 3 | GO:0033542: fatty acid beta-oxidation, unsaturated, even number | 0.00E+00 |
| 4 | GO:0043269: regulation of ion transport | 0.00E+00 |
| 5 | GO:0042891: antibiotic transport | 0.00E+00 |
| 6 | GO:0000162: tryptophan biosynthetic process | 1.13E-09 |
| 7 | GO:0009617: response to bacterium | 3.64E-08 |
| 8 | GO:0050832: defense response to fungus | 5.06E-06 |
| 9 | GO:0046686: response to cadmium ion | 2.49E-05 |
| 10 | GO:0009851: auxin biosynthetic process | 4.56E-05 |
| 11 | GO:0010120: camalexin biosynthetic process | 8.11E-05 |
| 12 | GO:0009808: lignin metabolic process | 8.11E-05 |
| 13 | GO:0010941: regulation of cell death | 1.08E-04 |
| 14 | GO:0010726: positive regulation of hydrogen peroxide metabolic process | 1.08E-04 |
| 15 | GO:0009700: indole phytoalexin biosynthetic process | 1.08E-04 |
| 16 | GO:0009623: response to parasitic fungus | 1.08E-04 |
| 17 | GO:0051245: negative regulation of cellular defense response | 1.08E-04 |
| 18 | GO:0006032: chitin catabolic process | 1.44E-04 |
| 19 | GO:0009682: induced systemic resistance | 1.69E-04 |
| 20 | GO:0052544: defense response by callose deposition in cell wall | 1.69E-04 |
| 21 | GO:0000272: polysaccharide catabolic process | 1.69E-04 |
| 22 | GO:0002215: defense response to nematode | 2.52E-04 |
| 23 | GO:0060919: auxin influx | 2.52E-04 |
| 24 | GO:0015865: purine nucleotide transport | 2.52E-04 |
| 25 | GO:0042343: indole glucosinolate metabolic process | 2.87E-04 |
| 26 | GO:0009636: response to toxic substance | 3.06E-04 |
| 27 | GO:0006813: potassium ion transport | 3.88E-04 |
| 28 | GO:1902626: assembly of large subunit precursor of preribosome | 4.19E-04 |
| 29 | GO:0051176: positive regulation of sulfur metabolic process | 4.19E-04 |
| 30 | GO:0042256: mature ribosome assembly | 4.19E-04 |
| 31 | GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway | 4.19E-04 |
| 32 | GO:0016998: cell wall macromolecule catabolic process | 4.33E-04 |
| 33 | GO:0016226: iron-sulfur cluster assembly | 4.74E-04 |
| 34 | GO:0071456: cellular response to hypoxia | 4.74E-04 |
| 35 | GO:0071215: cellular response to abscisic acid stimulus | 5.16E-04 |
| 36 | GO:0009625: response to insect | 5.16E-04 |
| 37 | GO:0046902: regulation of mitochondrial membrane permeability | 6.01E-04 |
| 38 | GO:0006612: protein targeting to membrane | 6.01E-04 |
| 39 | GO:0019438: aromatic compound biosynthetic process | 6.01E-04 |
| 40 | GO:0002239: response to oomycetes | 6.01E-04 |
| 41 | GO:0046323: glucose import | 7.01E-04 |
| 42 | GO:0010363: regulation of plant-type hypersensitive response | 7.98E-04 |
| 43 | GO:0010600: regulation of auxin biosynthetic process | 7.98E-04 |
| 44 | GO:0000460: maturation of 5.8S rRNA | 7.98E-04 |
| 45 | GO:0010107: potassium ion import | 7.98E-04 |
| 46 | GO:0042991: transcription factor import into nucleus | 7.98E-04 |
| 47 | GO:1902584: positive regulation of response to water deprivation | 7.98E-04 |
| 48 | GO:0002229: defense response to oomycetes | 8.59E-04 |
| 49 | GO:0006090: pyruvate metabolic process | 1.01E-03 |
| 50 | GO:0006564: L-serine biosynthetic process | 1.01E-03 |
| 51 | GO:0030308: negative regulation of cell growth | 1.01E-03 |
| 52 | GO:0010315: auxin efflux | 1.23E-03 |
| 53 | GO:0006796: phosphate-containing compound metabolic process | 1.23E-03 |
| 54 | GO:0009759: indole glucosinolate biosynthetic process | 1.23E-03 |
| 55 | GO:0010942: positive regulation of cell death | 1.23E-03 |
| 56 | GO:0000470: maturation of LSU-rRNA | 1.23E-03 |
| 57 | GO:0000054: ribosomal subunit export from nucleus | 1.47E-03 |
| 58 | GO:0009861: jasmonic acid and ethylene-dependent systemic resistance | 1.47E-03 |
| 59 | GO:0055114: oxidation-reduction process | 1.51E-03 |
| 60 | GO:0010311: lateral root formation | 1.66E-03 |
| 61 | GO:0009395: phospholipid catabolic process | 1.73E-03 |
| 62 | GO:0009407: toxin catabolic process | 1.74E-03 |
| 63 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.00E-03 |
| 64 | GO:0016559: peroxisome fission | 2.00E-03 |
| 65 | GO:0009061: anaerobic respiration | 2.00E-03 |
| 66 | GO:0006002: fructose 6-phosphate metabolic process | 2.28E-03 |
| 67 | GO:0006098: pentose-phosphate shunt | 2.57E-03 |
| 68 | GO:0034765: regulation of ion transmembrane transport | 2.57E-03 |
| 69 | GO:0090333: regulation of stomatal closure | 2.57E-03 |
| 70 | GO:0010112: regulation of systemic acquired resistance | 2.57E-03 |
| 71 | GO:0007338: single fertilization | 2.57E-03 |
| 72 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.57E-03 |
| 73 | GO:0008202: steroid metabolic process | 2.88E-03 |
| 74 | GO:0007064: mitotic sister chromatid cohesion | 3.20E-03 |
| 75 | GO:0009688: abscisic acid biosynthetic process | 3.20E-03 |
| 76 | GO:0043069: negative regulation of programmed cell death | 3.20E-03 |
| 77 | GO:0030148: sphingolipid biosynthetic process | 3.53E-03 |
| 78 | GO:0002213: defense response to insect | 3.87E-03 |
| 79 | GO:0071365: cellular response to auxin stimulus | 3.87E-03 |
| 80 | GO:0006108: malate metabolic process | 4.23E-03 |
| 81 | GO:0009626: plant-type hypersensitive response | 4.31E-03 |
| 82 | GO:0006541: glutamine metabolic process | 4.59E-03 |
| 83 | GO:0007034: vacuolar transport | 4.59E-03 |
| 84 | GO:0010540: basipetal auxin transport | 4.59E-03 |
| 85 | GO:0007031: peroxisome organization | 4.96E-03 |
| 86 | GO:0042742: defense response to bacterium | 5.49E-03 |
| 87 | GO:0009863: salicylic acid mediated signaling pathway | 5.75E-03 |
| 88 | GO:0080147: root hair cell development | 5.75E-03 |
| 89 | GO:0048278: vesicle docking | 6.56E-03 |
| 90 | GO:0031408: oxylipin biosynthetic process | 6.56E-03 |
| 91 | GO:0051260: protein homooligomerization | 6.56E-03 |
| 92 | GO:0098542: defense response to other organism | 6.56E-03 |
| 93 | GO:0035428: hexose transmembrane transport | 6.99E-03 |
| 94 | GO:0009814: defense response, incompatible interaction | 6.99E-03 |
| 95 | GO:0071369: cellular response to ethylene stimulus | 7.42E-03 |
| 96 | GO:0006012: galactose metabolic process | 7.42E-03 |
| 97 | GO:0006952: defense response | 8.49E-03 |
| 98 | GO:0042391: regulation of membrane potential | 8.79E-03 |
| 99 | GO:0045489: pectin biosynthetic process | 9.26E-03 |
| 100 | GO:0006885: regulation of pH | 9.26E-03 |
| 101 | GO:0048544: recognition of pollen | 9.74E-03 |
| 102 | GO:0061025: membrane fusion | 9.74E-03 |
| 103 | GO:0048825: cotyledon development | 1.02E-02 |
| 104 | GO:0009630: gravitropism | 1.12E-02 |
| 105 | GO:0019760: glucosinolate metabolic process | 1.23E-02 |
| 106 | GO:0009567: double fertilization forming a zygote and endosperm | 1.23E-02 |
| 107 | GO:0071805: potassium ion transmembrane transport | 1.28E-02 |
| 108 | GO:0051607: defense response to virus | 1.34E-02 |
| 109 | GO:0006906: vesicle fusion | 1.51E-02 |
| 110 | GO:0009723: response to ethylene | 1.51E-02 |
| 111 | GO:0006950: response to stress | 1.56E-02 |
| 112 | GO:0010200: response to chitin | 1.67E-02 |
| 113 | GO:0009817: defense response to fungus, incompatible interaction | 1.68E-02 |
| 114 | GO:0008219: cell death | 1.68E-02 |
| 115 | GO:0048767: root hair elongation | 1.74E-02 |
| 116 | GO:0010043: response to zinc ion | 1.86E-02 |
| 117 | GO:0009867: jasmonic acid mediated signaling pathway | 1.99E-02 |
| 118 | GO:0006839: mitochondrial transport | 2.18E-02 |
| 119 | GO:0006887: exocytosis | 2.25E-02 |
| 120 | GO:0031640: killing of cells of other organism | 2.36E-02 |
| 121 | GO:0006855: drug transmembrane transport | 2.66E-02 |
| 122 | GO:0006812: cation transport | 2.80E-02 |
| 123 | GO:0009809: lignin biosynthetic process | 2.94E-02 |
| 124 | GO:0009736: cytokinin-activated signaling pathway | 2.94E-02 |
| 125 | GO:0009873: ethylene-activated signaling pathway | 3.08E-02 |
| 126 | GO:0006096: glycolytic process | 3.32E-02 |
| 127 | GO:0005975: carbohydrate metabolic process | 3.77E-02 |
| 128 | GO:0009735: response to cytokinin | 3.87E-02 |
| 129 | GO:0009742: brassinosteroid mediated signaling pathway | 3.94E-02 |
| 130 | GO:0006468: protein phosphorylation | 4.34E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 2 | GO:0010298: dihydrocamalexic acid decarboxylase activity | 0.00E+00 |
| 3 | GO:0015575: mannitol transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0015591: D-ribose transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0015148: D-xylose transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 7 | GO:0005365: myo-inositol transmembrane transporter activity | 0.00E+00 |
| 8 | GO:0015576: sorbitol transmembrane transporter activity | 0.00E+00 |
| 9 | GO:0052642: lysophosphatidic acid phosphatase activity | 0.00E+00 |
| 10 | GO:0047634: agmatine N4-coumaroyltransferase activity | 0.00E+00 |
| 11 | GO:0004049: anthranilate synthase activity | 2.29E-06 |
| 12 | GO:0004834: tryptophan synthase activity | 1.03E-05 |
| 13 | GO:0005496: steroid binding | 1.69E-05 |
| 14 | GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity | 1.08E-04 |
| 15 | GO:0015168: glycerol transmembrane transporter activity | 1.08E-04 |
| 16 | GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 1.08E-04 |
| 17 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 1.08E-04 |
| 18 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.08E-04 |
| 19 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 1.08E-04 |
| 20 | GO:0004568: chitinase activity | 1.44E-04 |
| 21 | GO:0020037: heme binding | 1.59E-04 |
| 22 | GO:0004364: glutathione transferase activity | 2.48E-04 |
| 23 | GO:0032934: sterol binding | 2.52E-04 |
| 24 | GO:0045140: inositol phosphoceramide synthase activity | 2.52E-04 |
| 25 | GO:0047209: coniferyl-alcohol glucosyltransferase activity | 2.52E-04 |
| 26 | GO:0005506: iron ion binding | 2.72E-04 |
| 27 | GO:0008061: chitin binding | 2.87E-04 |
| 28 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 4.19E-04 |
| 29 | GO:0016595: glutamate binding | 4.19E-04 |
| 30 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 4.19E-04 |
| 31 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 6.01E-04 |
| 32 | GO:0043023: ribosomal large subunit binding | 6.01E-04 |
| 33 | GO:0005354: galactose transmembrane transporter activity | 6.01E-04 |
| 34 | GO:0030246: carbohydrate binding | 6.29E-04 |
| 35 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 6.52E-04 |
| 36 | GO:0005355: glucose transmembrane transporter activity | 7.52E-04 |
| 37 | GO:0010328: auxin influx transmembrane transporter activity | 7.98E-04 |
| 38 | GO:0004470: malic enzyme activity | 7.98E-04 |
| 39 | GO:0004031: aldehyde oxidase activity | 7.98E-04 |
| 40 | GO:0050302: indole-3-acetaldehyde oxidase activity | 7.98E-04 |
| 41 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 7.98E-04 |
| 42 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.98E-04 |
| 43 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 7.98E-04 |
| 44 | GO:0008948: oxaloacetate decarboxylase activity | 1.01E-03 |
| 45 | GO:0005471: ATP:ADP antiporter activity | 1.01E-03 |
| 46 | GO:0015145: monosaccharide transmembrane transporter activity | 1.01E-03 |
| 47 | GO:0035252: UDP-xylosyltransferase activity | 1.23E-03 |
| 48 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.47E-03 |
| 49 | GO:0005242: inward rectifier potassium channel activity | 1.47E-03 |
| 50 | GO:0051020: GTPase binding | 1.47E-03 |
| 51 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.61E-03 |
| 52 | GO:0003872: 6-phosphofructokinase activity | 1.73E-03 |
| 53 | GO:0004620: phospholipase activity | 1.73E-03 |
| 54 | GO:0003746: translation elongation factor activity | 1.99E-03 |
| 55 | GO:0043022: ribosome binding | 2.00E-03 |
| 56 | GO:0004034: aldose 1-epimerase activity | 2.00E-03 |
| 57 | GO:0008142: oxysterol binding | 2.28E-03 |
| 58 | GO:0071949: FAD binding | 2.57E-03 |
| 59 | GO:0004713: protein tyrosine kinase activity | 3.20E-03 |
| 60 | GO:0008171: O-methyltransferase activity | 3.20E-03 |
| 61 | GO:0008047: enzyme activator activity | 3.20E-03 |
| 62 | GO:0019825: oxygen binding | 3.22E-03 |
| 63 | GO:0047372: acylglycerol lipase activity | 3.53E-03 |
| 64 | GO:0010329: auxin efflux transmembrane transporter activity | 4.23E-03 |
| 65 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.23E-03 |
| 66 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.59E-03 |
| 67 | GO:0051536: iron-sulfur cluster binding | 5.75E-03 |
| 68 | GO:0031418: L-ascorbic acid binding | 5.75E-03 |
| 69 | GO:0015079: potassium ion transmembrane transporter activity | 6.15E-03 |
| 70 | GO:0015144: carbohydrate transmembrane transporter activity | 7.28E-03 |
| 71 | GO:0005351: sugar:proton symporter activity | 8.20E-03 |
| 72 | GO:0030551: cyclic nucleotide binding | 8.79E-03 |
| 73 | GO:0005451: monovalent cation:proton antiporter activity | 8.79E-03 |
| 74 | GO:0015299: solute:proton antiporter activity | 9.74E-03 |
| 75 | GO:0010181: FMN binding | 9.74E-03 |
| 76 | GO:0016853: isomerase activity | 9.74E-03 |
| 77 | GO:0042802: identical protein binding | 1.07E-02 |
| 78 | GO:0015385: sodium:proton antiporter activity | 1.18E-02 |
| 79 | GO:0050660: flavin adenine dinucleotide binding | 1.51E-02 |
| 80 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.62E-02 |
| 81 | GO:0004497: monooxygenase activity | 1.62E-02 |
| 82 | GO:0015238: drug transmembrane transporter activity | 1.74E-02 |
| 83 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.86E-02 |
| 84 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.99E-02 |
| 85 | GO:0003993: acid phosphatase activity | 2.05E-02 |
| 86 | GO:0000149: SNARE binding | 2.12E-02 |
| 87 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.18E-02 |
| 88 | GO:0005484: SNAP receptor activity | 2.38E-02 |
| 89 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.52E-02 |
| 90 | GO:0051287: NAD binding | 2.73E-02 |
| 91 | GO:0005524: ATP binding | 3.00E-02 |
| 92 | GO:0016298: lipase activity | 3.02E-02 |
| 93 | GO:0045735: nutrient reservoir activity | 3.32E-02 |
| 94 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.55E-02 |
| 95 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.55E-02 |
| 96 | GO:0016746: transferase activity, transferring acyl groups | 3.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005886: plasma membrane | 1.03E-05 |
| 2 | GO:0016021: integral component of membrane | 2.03E-05 |
| 3 | GO:0032783: ELL-EAF complex | 1.08E-04 |
| 4 | GO:0005829: cytosol | 1.60E-04 |
| 5 | GO:0005950: anthranilate synthase complex | 2.52E-04 |
| 6 | GO:0005774: vacuolar membrane | 2.68E-04 |
| 7 | GO:0016020: membrane | 2.79E-04 |
| 8 | GO:0005853: eukaryotic translation elongation factor 1 complex | 4.19E-04 |
| 9 | GO:0005783: endoplasmic reticulum | 4.78E-04 |
| 10 | GO:0005775: vacuolar lumen | 6.01E-04 |
| 11 | GO:0005945: 6-phosphofructokinase complex | 1.01E-03 |
| 12 | GO:0030687: preribosome, large subunit precursor | 1.73E-03 |
| 13 | GO:0005779: integral component of peroxisomal membrane | 2.28E-03 |
| 14 | GO:0009570: chloroplast stroma | 3.96E-03 |
| 15 | GO:0005578: proteinaceous extracellular matrix | 4.23E-03 |
| 16 | GO:0005618: cell wall | 4.41E-03 |
| 17 | GO:0012505: endomembrane system | 4.72E-03 |
| 18 | GO:0005778: peroxisomal membrane | 1.28E-02 |
| 19 | GO:0000325: plant-type vacuole | 1.86E-02 |
| 20 | GO:0031201: SNARE complex | 2.25E-02 |
| 21 | GO:0005773: vacuole | 2.33E-02 |
| 22 | GO:0043231: intracellular membrane-bounded organelle | 2.64E-02 |
| 23 | GO:0009536: plastid | 2.90E-02 |
| 24 | GO:0010008: endosome membrane | 3.39E-02 |
| 25 | GO:0009506: plasmodesma | 4.37E-02 |
| 26 | GO:0005777: peroxisome | 4.84E-02 |