Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G03770

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009946: proximal/distal axis specification0.00E+00
2GO:0015822: ornithine transport0.00E+00
3GO:0009715: chalcone biosynthetic process0.00E+00
4GO:0010336: gibberellic acid homeostasis0.00E+00
5GO:0007638: mechanosensory behavior0.00E+00
6GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
7GO:2000605: positive regulation of secondary growth0.00E+00
8GO:0019253: reductive pentose-phosphate cycle4.84E-07
9GO:0016117: carotenoid biosynthetic process3.63E-06
10GO:0009765: photosynthesis, light harvesting2.88E-05
11GO:0016123: xanthophyll biosynthetic process4.65E-05
12GO:0006810: transport5.79E-05
13GO:0008610: lipid biosynthetic process1.62E-04
14GO:0006659: phosphatidylserine biosynthetic process1.98E-04
15GO:0000066: mitochondrial ornithine transport1.98E-04
16GO:0019510: S-adenosylhomocysteine catabolic process1.98E-04
17GO:0010597: green leaf volatile biosynthetic process1.98E-04
18GO:1901349: glucosinolate transport1.98E-04
19GO:0006438: valyl-tRNA aminoacylation1.98E-04
20GO:0090449: phloem glucosinolate loading1.98E-04
21GO:0010442: guard cell morphogenesis1.98E-04
22GO:0080183: response to photooxidative stress4.43E-04
23GO:0030388: fructose 1,6-bisphosphate metabolic process4.43E-04
24GO:2000123: positive regulation of stomatal complex development4.43E-04
25GO:0052541: plant-type cell wall cellulose metabolic process4.43E-04
26GO:0009629: response to gravity4.43E-04
27GO:1903338: regulation of cell wall organization or biogenesis4.43E-04
28GO:0033353: S-adenosylmethionine cycle4.43E-04
29GO:0009767: photosynthetic electron transport chain5.18E-04
30GO:0010020: chloroplast fission5.82E-04
31GO:0006696: ergosterol biosynthetic process7.22E-04
32GO:0010338: leaf formation7.22E-04
33GO:0006000: fructose metabolic process7.22E-04
34GO:0015840: urea transport7.22E-04
35GO:0006833: water transport7.25E-04
36GO:0009695: jasmonic acid biosynthetic process8.81E-04
37GO:0031408: oxylipin biosynthetic process9.64E-04
38GO:0043572: plastid fission1.03E-03
39GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.03E-03
40GO:0007231: osmosensory signaling pathway1.03E-03
41GO:0080170: hydrogen peroxide transmembrane transport1.03E-03
42GO:0009052: pentose-phosphate shunt, non-oxidative branch1.03E-03
43GO:0046686: response to cadmium ion1.10E-03
44GO:0006096: glycolytic process1.36E-03
45GO:0009694: jasmonic acid metabolic process1.37E-03
46GO:0006542: glutamine biosynthetic process1.37E-03
47GO:0019676: ammonia assimilation cycle1.37E-03
48GO:0019464: glycine decarboxylation via glycine cleavage system1.37E-03
49GO:0045088: regulation of innate immune response1.37E-03
50GO:0033500: carbohydrate homeostasis1.37E-03
51GO:2000038: regulation of stomatal complex development1.37E-03
52GO:0006546: glycine catabolic process1.37E-03
53GO:0006749: glutathione metabolic process1.37E-03
54GO:0034440: lipid oxidation1.37E-03
55GO:0006021: inositol biosynthetic process1.37E-03
56GO:0034220: ion transmembrane transport1.45E-03
57GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.64E-03
58GO:0010375: stomatal complex patterning1.74E-03
59GO:0016120: carotene biosynthetic process1.74E-03
60GO:0010236: plastoquinone biosynthetic process1.74E-03
61GO:0019252: starch biosynthetic process1.79E-03
62GO:0071554: cell wall organization or biogenesis1.92E-03
63GO:0010304: PSII associated light-harvesting complex II catabolic process2.14E-03
64GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.14E-03
65GO:0009643: photosynthetic acclimation2.14E-03
66GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity2.57E-03
67GO:0042026: protein refolding2.57E-03
68GO:0009094: L-phenylalanine biosynthetic process2.57E-03
69GO:0006458: 'de novo' protein folding2.57E-03
70GO:0017148: negative regulation of translation2.57E-03
71GO:0080027: response to herbivore3.03E-03
72GO:0006633: fatty acid biosynthetic process3.05E-03
73GO:0048573: photoperiodism, flowering3.24E-03
74GO:0031540: regulation of anthocyanin biosynthetic process3.51E-03
75GO:0052543: callose deposition in cell wall3.51E-03
76GO:0048564: photosystem I assembly3.51E-03
77GO:0005978: glycogen biosynthetic process3.51E-03
78GO:0018298: protein-chromophore linkage3.59E-03
79GO:0009407: toxin catabolic process3.95E-03
80GO:0006002: fructose 6-phosphate metabolic process4.02E-03
81GO:0022900: electron transport chain4.02E-03
82GO:0006075: (1->3)-beta-D-glucan biosynthetic process4.02E-03
83GO:0048193: Golgi vesicle transport4.02E-03
84GO:0009657: plastid organization4.02E-03
85GO:0006754: ATP biosynthetic process4.54E-03
86GO:0048589: developmental growth4.54E-03
87GO:0008356: asymmetric cell division5.10E-03
88GO:0010192: mucilage biosynthetic process5.67E-03
89GO:0051555: flavonol biosynthetic process5.67E-03
90GO:0009744: response to sucrose5.85E-03
91GO:0051707: response to other organism5.85E-03
92GO:0009735: response to cytokinin5.90E-03
93GO:0009658: chloroplast organization5.98E-03
94GO:0006816: calcium ion transport6.27E-03
95GO:0009773: photosynthetic electron transport in photosystem I6.27E-03
96GO:0019684: photosynthesis, light reaction6.27E-03
97GO:0006415: translational termination6.27E-03
98GO:0000272: polysaccharide catabolic process6.27E-03
99GO:0009636: response to toxic substance6.57E-03
100GO:0050826: response to freezing7.52E-03
101GO:0006094: gluconeogenesis7.52E-03
102GO:0005986: sucrose biosynthetic process7.52E-03
103GO:0006006: glucose metabolic process7.52E-03
104GO:0080167: response to karrikin7.86E-03
105GO:0006857: oligopeptide transport8.44E-03
106GO:0070588: calcium ion transmembrane transport8.87E-03
107GO:0009833: plant-type primary cell wall biogenesis9.57E-03
108GO:0006071: glycerol metabolic process9.57E-03
109GO:0009944: polarity specification of adaxial/abaxial axis1.03E-02
110GO:0007010: cytoskeleton organization1.03E-02
111GO:0006418: tRNA aminoacylation for protein translation1.10E-02
112GO:0010026: trichome differentiation1.10E-02
113GO:0007017: microtubule-based process1.10E-02
114GO:0009768: photosynthesis, light harvesting in photosystem I1.10E-02
115GO:0061077: chaperone-mediated protein folding1.18E-02
116GO:0006366: transcription from RNA polymerase II promoter1.18E-02
117GO:0007005: mitochondrion organization1.26E-02
118GO:0080092: regulation of pollen tube growth1.26E-02
119GO:0006730: one-carbon metabolic process1.26E-02
120GO:0009294: DNA mediated transformation1.34E-02
121GO:0009753: response to jasmonic acid1.41E-02
122GO:0006284: base-excision repair1.42E-02
123GO:0008152: metabolic process1.46E-02
124GO:0042335: cuticle development1.59E-02
125GO:0009790: embryo development1.65E-02
126GO:0008360: regulation of cell shape1.67E-02
127GO:0008654: phospholipid biosynthetic process1.85E-02
128GO:0009791: post-embryonic development1.85E-02
129GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.94E-02
130GO:0007264: small GTPase mediated signal transduction2.04E-02
131GO:0010583: response to cyclopentenone2.04E-02
132GO:0007267: cell-cell signaling2.33E-02
133GO:0010286: heat acclimation2.33E-02
134GO:0009617: response to bacterium2.33E-02
135GO:0009615: response to virus2.53E-02
136GO:0016126: sterol biosynthetic process2.53E-02
137GO:0009416: response to light stimulus2.66E-02
138GO:0009611: response to wounding2.73E-02
139GO:0042128: nitrate assimilation2.73E-02
140GO:0016049: cell growth2.94E-02
141GO:0009817: defense response to fungus, incompatible interaction3.05E-02
142GO:0030244: cellulose biosynthetic process3.05E-02
143GO:0048767: root hair elongation3.16E-02
144GO:0009813: flavonoid biosynthetic process3.16E-02
145GO:0009832: plant-type cell wall biogenesis3.16E-02
146GO:0010218: response to far red light3.27E-02
147GO:0007568: aging3.38E-02
148GO:0010119: regulation of stomatal movement3.38E-02
149GO:0009637: response to blue light3.61E-02
150GO:0005975: carbohydrate metabolic process3.61E-02
151GO:0009853: photorespiration3.61E-02
152GO:0009867: jasmonic acid mediated signaling pathway3.61E-02
153GO:0016051: carbohydrate biosynthetic process3.61E-02
154GO:0006839: mitochondrial transport3.96E-02
155GO:0055114: oxidation-reduction process4.05E-02
156GO:0015979: photosynthesis4.26E-02
157GO:0010114: response to red light4.32E-02
158GO:0009926: auxin polar transport4.32E-02
159GO:0009965: leaf morphogenesis4.70E-02
RankGO TermAdjusted P value
1GO:0030795: jasmonate O-methyltransferase activity0.00E+00
2GO:0102078: methyl jasmonate methylesterase activity0.00E+00
3GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
4GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
5GO:0016210: naringenin-chalcone synthase activity0.00E+00
6GO:0045435: lycopene epsilon cyclase activity0.00E+00
7GO:0050613: delta14-sterol reductase activity0.00E+00
8GO:0008962: phosphatidylglycerophosphatase activity0.00E+00
9GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
10GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
11GO:0046905: phytoene synthase activity0.00E+00
12GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
13GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity9.52E-05
14GO:0090448: glucosinolate:proton symporter activity1.98E-04
15GO:0047259: glucomannan 4-beta-mannosyltransferase activity1.98E-04
16GO:0004013: adenosylhomocysteinase activity1.98E-04
17GO:0051996: squalene synthase activity1.98E-04
18GO:0010313: phytochrome binding1.98E-04
19GO:0004832: valine-tRNA ligase activity1.98E-04
20GO:0010291: carotene beta-ring hydroxylase activity4.43E-04
21GO:0004618: phosphoglycerate kinase activity4.43E-04
22GO:0004047: aminomethyltransferase activity4.43E-04
23GO:0004312: fatty acid synthase activity4.43E-04
24GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity4.43E-04
25GO:0000064: L-ornithine transmembrane transporter activity4.43E-04
26GO:0004512: inositol-3-phosphate synthase activity4.43E-04
27GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity4.43E-04
28GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity4.43E-04
29GO:0004310: farnesyl-diphosphate farnesyltransferase activity4.43E-04
30GO:0016757: transferase activity, transferring glycosyl groups6.93E-04
31GO:0030267: glyoxylate reductase (NADP) activity7.22E-04
32GO:0016165: linoleate 13S-lipoxygenase activity7.22E-04
33GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity7.22E-04
34GO:0003913: DNA photolyase activity7.22E-04
35GO:0004148: dihydrolipoyl dehydrogenase activity7.22E-04
36GO:0004751: ribose-5-phosphate isomerase activity7.22E-04
37GO:0004176: ATP-dependent peptidase activity9.64E-04
38GO:0051287: NAD binding9.66E-04
39GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.03E-03
40GO:0001872: (1->3)-beta-D-glucan binding1.03E-03
41GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity1.03E-03
42GO:0004375: glycine dehydrogenase (decarboxylating) activity1.03E-03
43GO:0048027: mRNA 5'-UTR binding1.03E-03
44GO:0016149: translation release factor activity, codon specific1.03E-03
45GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.03E-03
46GO:0015204: urea transmembrane transporter activity1.37E-03
47GO:0047769: arogenate dehydratase activity1.37E-03
48GO:0004664: prephenate dehydratase activity1.37E-03
49GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.37E-03
50GO:0008878: glucose-1-phosphate adenylyltransferase activity1.37E-03
51GO:0004356: glutamate-ammonia ligase activity1.74E-03
52GO:0008725: DNA-3-methyladenine glycosylase activity1.74E-03
53GO:0030414: peptidase inhibitor activity1.74E-03
54GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1.74E-03
55GO:0019901: protein kinase binding1.79E-03
56GO:0080030: methyl indole-3-acetate esterase activity2.14E-03
57GO:0102229: amylopectin maltohydrolase activity2.14E-03
58GO:0042578: phosphoric ester hydrolase activity2.14E-03
59GO:0008237: metallopeptidase activity2.46E-03
60GO:0005200: structural constituent of cytoskeleton2.46E-03
61GO:0051753: mannan synthase activity2.57E-03
62GO:0016161: beta-amylase activity2.57E-03
63GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.57E-03
64GO:0016413: O-acetyltransferase activity2.61E-03
65GO:0016597: amino acid binding2.61E-03
66GO:0015250: water channel activity2.76E-03
67GO:0009881: photoreceptor activity3.03E-03
68GO:0043295: glutathione binding3.03E-03
69GO:0004033: aldo-keto reductase (NADP) activity3.51E-03
70GO:0004222: metalloendopeptidase activity3.95E-03
71GO:0003843: 1,3-beta-D-glucan synthase activity4.02E-03
72GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism4.54E-03
73GO:0003747: translation release factor activity4.54E-03
74GO:0008889: glycerophosphodiester phosphodiesterase activity4.54E-03
75GO:0004364: glutathione transferase activity5.62E-03
76GO:0016788: hydrolase activity, acting on ester bonds6.12E-03
77GO:0044183: protein binding involved in protein folding6.27E-03
78GO:0005089: Rho guanyl-nucleotide exchange factor activity6.27E-03
79GO:0005262: calcium channel activity7.52E-03
80GO:0004565: beta-galactosidase activity7.52E-03
81GO:0004175: endopeptidase activity8.19E-03
82GO:0016740: transferase activity9.13E-03
83GO:0031409: pigment binding9.57E-03
84GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups9.63E-03
85GO:0001046: core promoter sequence-specific DNA binding1.03E-02
86GO:0016760: cellulose synthase (UDP-forming) activity1.34E-02
87GO:0030570: pectate lyase activity1.34E-02
88GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.45E-02
89GO:0004812: aminoacyl-tRNA ligase activity1.50E-02
90GO:0048038: quinone binding1.94E-02
91GO:0004518: nuclease activity2.04E-02
92GO:0008194: UDP-glycosyltransferase activity2.18E-02
93GO:0016759: cellulose synthase activity2.23E-02
94GO:0016887: ATPase activity2.24E-02
95GO:0008483: transaminase activity2.33E-02
96GO:0016168: chlorophyll binding2.63E-02
97GO:0030247: polysaccharide binding2.84E-02
98GO:0004693: cyclin-dependent protein serine/threonine kinase activity3.27E-02
99GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.38E-02
100GO:0050897: cobalt ion binding3.38E-02
101GO:0050661: NADP binding3.96E-02
102GO:0052689: carboxylic ester hydrolase activity4.13E-02
103GO:0051537: 2 iron, 2 sulfur cluster binding4.57E-02
104GO:0005198: structural molecule activity4.70E-02
RankGO TermAdjusted P value
1GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
2GO:0030931: heterotetrameric ADPG pyrophosphorylase complex0.00E+00
3GO:0097708: intracellular vesicle0.00E+00
4GO:0009941: chloroplast envelope7.80E-11
5GO:0009507: chloroplast1.11E-10
6GO:0009570: chloroplast stroma1.51E-10
7GO:0009579: thylakoid1.72E-07
8GO:0009535: chloroplast thylakoid membrane1.80E-07
9GO:0009654: photosystem II oxygen evolving complex5.18E-05
10GO:0031225: anchored component of membrane2.22E-04
11GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.45E-04
12GO:0009543: chloroplast thylakoid lumen3.54E-04
13GO:0045254: pyruvate dehydrogenase complex4.43E-04
14GO:0030095: chloroplast photosystem II5.82E-04
15GO:0048046: apoplast8.26E-04
16GO:0005960: glycine cleavage complex1.03E-03
17GO:0031969: chloroplast membrane1.56E-03
18GO:0019898: extrinsic component of membrane1.79E-03
19GO:0005794: Golgi apparatus1.84E-03
20GO:0000793: condensed chromosome2.14E-03
21GO:0010168: ER body2.14E-03
22GO:0009534: chloroplast thylakoid2.28E-03
23GO:0010319: stromule2.46E-03
24GO:0005886: plasma membrane2.56E-03
25GO:0042807: central vacuole3.03E-03
26GO:0000326: protein storage vacuole4.02E-03
27GO:0000148: 1,3-beta-D-glucan synthase complex4.02E-03
28GO:0009539: photosystem II reaction center4.02E-03
29GO:0045298: tubulin complex4.54E-03
30GO:0046658: anchored component of plasma membrane4.90E-03
31GO:0031977: thylakoid lumen5.39E-03
32GO:0016324: apical plasma membrane5.67E-03
33GO:0005856: cytoskeleton6.57E-03
34GO:0016020: membrane7.82E-03
35GO:0030076: light-harvesting complex8.87E-03
36GO:0030176: integral component of endoplasmic reticulum membrane8.87E-03
37GO:0010287: plastoglobule1.34E-02
38GO:0009522: photosystem I1.76E-02
39GO:0005759: mitochondrial matrix1.77E-02
40GO:0009523: photosystem II1.85E-02
41GO:0005887: integral component of plasma membrane1.90E-02
42GO:0009705: plant-type vacuole membrane1.95E-02
43GO:0005618: cell wall2.27E-02
44GO:0022626: cytosolic ribosome2.52E-02
45GO:0009536: plastid2.65E-02
46GO:0000325: plant-type vacuole3.38E-02
47GO:0000786: nucleosome3.50E-02
48GO:0005874: microtubule3.61E-02
49GO:0005773: vacuole3.90E-02
50GO:0009506: plasmodesma4.62E-02
Gene type



Gene DE type