co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G03520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
2	GO:0010360: negative regulation of anion channel activity	0.00E+00
3	GO:0010398: xylogalacturonan metabolic process	0.00E+00
4	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
5	GO:0045185: maintenance of protein location	0.00E+00
6	GO:0032780: negative regulation of ATPase activity	0.00E+00
7	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	6.94E-05
8	GO:1902361: mitochondrial pyruvate transmembrane transport	1.14E-04
9	GO:0006643: membrane lipid metabolic process	1.14E-04
10	GO:0006481: C-terminal protein methylation	1.14E-04
11	GO:0060919: auxin influx	2.65E-04
12	GO:0006850: mitochondrial pyruvate transport	2.65E-04
13	GO:0015865: purine nucleotide transport	2.65E-04
14	GO:0019441: tryptophan catabolic process to kynurenine	2.65E-04
15	GO:0015914: phospholipid transport	2.65E-04
16	GO:0000162: tryptophan biosynthetic process	3.44E-04
17	GO:0080147: root hair cell development	3.83E-04
18	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	4.38E-04
19	GO:0051176: positive regulation of sulfur metabolic process	4.38E-04
20	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	4.38E-04
21	GO:0016998: cell wall macromolecule catabolic process	4.64E-04
22	GO:0001676: long-chain fatty acid metabolic process	6.29E-04
23	GO:0010116: positive regulation of abscisic acid biosynthetic process	6.29E-04
24	GO:0046902: regulation of mitochondrial membrane permeability	6.29E-04
25	GO:0000302: response to reactive oxygen species	9.17E-04
26	GO:0009630: gravitropism	9.77E-04
27	GO:0006564: L-serine biosynthetic process	1.05E-03
28	GO:0010315: auxin efflux	1.29E-03
29	GO:1900425: negative regulation of defense response to bacterium	1.29E-03
30	GO:0006014: D-ribose metabolic process	1.29E-03
31	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.29E-03
32	GO:0042742: defense response to bacterium	1.45E-03
33	GO:0009617: response to bacterium	1.63E-03
34	GO:1902074: response to salt	1.81E-03
35	GO:0050790: regulation of catalytic activity	1.81E-03
36	GO:0010044: response to aluminum ion	1.81E-03
37	GO:0080027: response to herbivore	1.81E-03
38	GO:0046470: phosphatidylcholine metabolic process	1.81E-03
39	GO:0009819: drought recovery	2.09E-03
40	GO:2000070: regulation of response to water deprivation	2.09E-03
41	GO:0045010: actin nucleation	2.09E-03
42	GO:0006102: isocitrate metabolic process	2.09E-03
43	GO:0006099: tricarboxylic acid cycle	2.23E-03
44	GO:0010120: camalexin biosynthetic process	2.39E-03
45	GO:0009808: lignin metabolic process	2.39E-03
46	GO:0009699: phenylpropanoid biosynthetic process	2.39E-03
47	GO:0009932: cell tip growth	2.39E-03
48	GO:0090333: regulation of stomatal closure	2.70E-03
49	GO:0051707: response to other organism	2.74E-03
50	GO:0046686: response to cadmium ion	3.16E-03
51	GO:0006032: chitin catabolic process	3.36E-03
52	GO:0043069: negative regulation of programmed cell death	3.36E-03
53	GO:0009682: induced systemic resistance	3.71E-03
54	GO:0052544: defense response by callose deposition in cell wall	3.71E-03
55	GO:0000272: polysaccharide catabolic process	3.71E-03
56	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	4.06E-03
57	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	4.43E-03
58	GO:0006626: protein targeting to mitochondrion	4.43E-03
59	GO:0055114: oxidation-reduction process	4.59E-03
60	GO:0010540: basipetal auxin transport	4.81E-03
61	GO:0008152: metabolic process	5.49E-03
62	GO:2000377: regulation of reactive oxygen species metabolic process	6.03E-03
63	GO:0031408: oxylipin biosynthetic process	6.89E-03
64	GO:0016226: iron-sulfur cluster assembly	7.34E-03
65	GO:0030433: ubiquitin-dependent ERAD pathway	7.34E-03
66	GO:0006012: galactose metabolic process	7.79E-03
67	GO:0010584: pollen exine formation	8.26E-03
68	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.74E-03
69	GO:0009735: response to cytokinin	8.97E-03
70	GO:0010150: leaf senescence	9.00E-03
71	GO:0042631: cellular response to water deprivation	9.23E-03
72	GO:0009738: abscisic acid-activated signaling pathway	9.64E-03
73	GO:0071472: cellular response to salt stress	9.73E-03
74	GO:0010197: polar nucleus fusion	9.73E-03
75	GO:0045489: pectin biosynthetic process	9.73E-03
76	GO:0019252: starch biosynthetic process	1.08E-02
77	GO:0009851: auxin biosynthetic process	1.08E-02
78	GO:0002229: defense response to oomycetes	1.13E-02
79	GO:0009615: response to virus	1.46E-02
80	GO:0006970: response to osmotic stress	1.51E-02
81	GO:0009816: defense response to bacterium, incompatible interaction	1.52E-02
82	GO:0009607: response to biotic stimulus	1.52E-02
83	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.52E-02
84	GO:0009627: systemic acquired resistance	1.58E-02
85	GO:0008219: cell death	1.77E-02
86	GO:0009817: defense response to fungus, incompatible interaction	1.77E-02
87	GO:0010200: response to chitin	1.79E-02
88	GO:0016192: vesicle-mediated transport	1.83E-02
89	GO:0048767: root hair elongation	1.83E-02
90	GO:0009813: flavonoid biosynthetic process	1.83E-02
91	GO:0046777: protein autophosphorylation	1.86E-02
92	GO:0044550: secondary metabolite biosynthetic process	1.89E-02
93	GO:0010119: regulation of stomatal movement	1.96E-02
94	GO:0010043: response to zinc ion	1.96E-02
95	GO:0006839: mitochondrial transport	2.29E-02
96	GO:0006631: fatty acid metabolic process	2.36E-02
97	GO:0016042: lipid catabolic process	2.49E-02
98	GO:0009926: auxin polar transport	2.50E-02
99	GO:0000209: protein polyubiquitination	2.57E-02
100	GO:0006952: defense response	2.82E-02
101	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.87E-02
102	GO:0009846: pollen germination	2.94E-02
103	GO:0051603: proteolysis involved in cellular protein catabolic process	3.17E-02
104	GO:0006508: proteolysis	3.28E-02
105	GO:0015031: protein transport	3.31E-02
106	GO:0048367: shoot system development	3.57E-02
107	GO:0009626: plant-type hypersensitive response	3.65E-02
108	GO:0006810: transport	3.95E-02
109	GO:0009845: seed germination	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0042030: ATPase inhibitor activity	0.00E+00
2	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
3	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
4	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
5	GO:0005522: profilin binding	0.00E+00
6	GO:0004656: procollagen-proline 4-dioxygenase activity	3.95E-05
7	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.14E-04
8	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.14E-04
9	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.14E-04
10	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.14E-04
11	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.14E-04
12	GO:0004061: arylformamidase activity	2.65E-04
13	GO:0004450: isocitrate dehydrogenase (NADP+) activity	2.65E-04
14	GO:0008061: chitin binding	3.08E-04
15	GO:0050833: pyruvate transmembrane transporter activity	4.38E-04
16	GO:0016805: dipeptidase activity	4.38E-04
17	GO:0008430: selenium binding	4.38E-04
18	GO:0004324: ferredoxin-NADP+ reductase activity	4.38E-04
19	GO:0004540: ribonuclease activity	4.64E-04
20	GO:0016656: monodehydroascorbate reductase (NADH) activity	6.29E-04
21	GO:0008276: protein methyltransferase activity	6.29E-04
22	GO:0004834: tryptophan synthase activity	8.35E-04
23	GO:0010328: auxin influx transmembrane transporter activity	8.35E-04
24	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.05E-03
25	GO:0004040: amidase activity	1.05E-03
26	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.05E-03
27	GO:0005496: steroid binding	1.05E-03
28	GO:0005471: ATP:ADP antiporter activity	1.05E-03
29	GO:0045431: flavonol synthase activity	1.05E-03
30	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.29E-03
31	GO:0035252: UDP-xylosyltransferase activity	1.29E-03
32	GO:0036402: proteasome-activating ATPase activity	1.29E-03
33	GO:0004526: ribonuclease P activity	1.29E-03
34	GO:0004747: ribokinase activity	1.54E-03
35	GO:0008320: protein transmembrane transporter activity	1.81E-03
36	GO:0008235: metalloexopeptidase activity	1.81E-03
37	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.81E-03
38	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.81E-03
39	GO:0004033: aldo-keto reductase (NADP) activity	2.09E-03
40	GO:0008865: fructokinase activity	2.09E-03
41	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.09E-03
42	GO:0004034: aldose 1-epimerase activity	2.09E-03
43	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.13E-03
44	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.39E-03
45	GO:0004630: phospholipase D activity	2.39E-03
46	GO:0071949: FAD binding	2.70E-03
47	GO:0045309: protein phosphorylated amino acid binding	3.02E-03
48	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	3.02E-03
49	GO:0020037: heme binding	3.23E-03
50	GO:0004568: chitinase activity	3.36E-03
51	GO:0008171: O-methyltransferase activity	3.36E-03
52	GO:0008047: enzyme activator activity	3.36E-03
53	GO:0005543: phospholipid binding	3.71E-03
54	GO:0019904: protein domain specific binding	3.71E-03
55	GO:0004177: aminopeptidase activity	3.71E-03
56	GO:0008559: xenobiotic-transporting ATPase activity	3.71E-03
57	GO:0010329: auxin efflux transmembrane transporter activity	4.43E-03
58	GO:0000175: 3'-5'-exoribonuclease activity	4.43E-03
59	GO:0004535: poly(A)-specific ribonuclease activity	4.81E-03
60	GO:0031624: ubiquitin conjugating enzyme binding	4.81E-03
61	GO:0017025: TBP-class protein binding	5.21E-03
62	GO:0016746: transferase activity, transferring acyl groups	5.37E-03
63	GO:0031418: L-ascorbic acid binding	6.03E-03
64	GO:0003954: NADH dehydrogenase activity	6.03E-03
65	GO:0008408: 3'-5' exonuclease activity	6.89E-03
66	GO:0035251: UDP-glucosyltransferase activity	6.89E-03
67	GO:0016491: oxidoreductase activity	9.27E-03
68	GO:0008194: UDP-glycosyltransferase activity	1.01E-02
69	GO:0016853: isomerase activity	1.02E-02
70	GO:0004197: cysteine-type endopeptidase activity	1.18E-02
71	GO:0051015: actin filament binding	1.24E-02
72	GO:0016301: kinase activity	1.39E-02
73	GO:0016597: amino acid binding	1.40E-02
74	GO:0051213: dioxygenase activity	1.46E-02
75	GO:0030246: carbohydrate binding	1.47E-02
76	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.70E-02
77	GO:0008236: serine-type peptidase activity	1.70E-02
78	GO:0030145: manganese ion binding	1.96E-02
79	GO:0003746: translation elongation factor activity	2.09E-02
80	GO:0042803: protein homodimerization activity	2.18E-02
81	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.25E-02
82	GO:0004674: protein serine/threonine kinase activity	2.31E-02
83	GO:0005506: iron ion binding	2.41E-02
84	GO:0004364: glutathione transferase activity	2.43E-02
85	GO:0051287: NAD binding	2.87E-02
86	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.09E-02
87	GO:0008234: cysteine-type peptidase activity	3.33E-02
88	GO:0045735: nutrient reservoir activity	3.49E-02
89	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.73E-02
90	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.73E-02
91	GO:0022857: transmembrane transporter activity	3.81E-02
92	GO:0003779: actin binding	3.89E-02
93	GO:0016758: transferase activity, transferring hexosyl groups	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0030014: CCR4-NOT complex	1.14E-04
2	GO:0032783: ELL-EAF complex	1.14E-04
3	GO:0005911: cell-cell junction	1.14E-04
4	GO:0005829: cytosol	2.27E-04
5	GO:0030134: ER to Golgi transport vesicle	2.65E-04
6	GO:0005901: caveola	2.65E-04
7	GO:0031304: intrinsic component of mitochondrial inner membrane	2.65E-04
8	GO:0005782: peroxisomal matrix	4.38E-04
9	GO:0005783: endoplasmic reticulum	5.80E-04
10	GO:0005886: plasma membrane	6.28E-04
11	GO:0030658: transport vesicle membrane	6.29E-04
12	GO:0005789: endoplasmic reticulum membrane	7.77E-04
13	GO:0016020: membrane	9.07E-04
14	GO:0032580: Golgi cisterna membrane	1.10E-03
15	GO:0031597: cytosolic proteasome complex	1.54E-03
16	GO:0031595: nuclear proteasome complex	1.81E-03
17	GO:0031305: integral component of mitochondrial inner membrane	2.09E-03
18	GO:0045273: respiratory chain complex II	2.09E-03
19	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.09E-03
20	GO:0005794: Golgi apparatus	2.53E-03
21	GO:0016021: integral component of membrane	2.96E-03
22	GO:0008540: proteasome regulatory particle, base subcomplex	3.02E-03
23	GO:0005764: lysosome	4.81E-03
24	GO:0005773: vacuole	8.96E-03
25	GO:0005777: peroxisome	1.20E-02
26	GO:0009570: chloroplast stroma	1.35E-02
27	GO:0005778: peroxisomal membrane	1.35E-02
28	GO:0000151: ubiquitin ligase complex	1.77E-02
29	GO:0005802: trans-Golgi network	1.83E-02
30	GO:0005768: endosome	2.15E-02
31	GO:0031902: late endosome membrane	2.36E-02
32	GO:0000502: proteasome complex	3.09E-02
33	GO:0005635: nuclear envelope	3.25E-02
34	GO:0000139: Golgi membrane	3.58E-02