GO Enrichment Analysis of Co-expressed Genes with
AT3G02910
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006573: valine metabolic process | 0.00E+00 |
| 2 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 3 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
| 4 | GO:0051881: regulation of mitochondrial membrane potential | 0.00E+00 |
| 5 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 6 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 7 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 8 | GO:0019253: reductive pentose-phosphate cycle | 6.41E-07 |
| 9 | GO:0015979: photosynthesis | 6.66E-07 |
| 10 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.19E-06 |
| 11 | GO:0009658: chloroplast organization | 3.14E-05 |
| 12 | GO:2000122: negative regulation of stomatal complex development | 3.35E-05 |
| 13 | GO:0006546: glycine catabolic process | 3.35E-05 |
| 14 | GO:0010037: response to carbon dioxide | 3.35E-05 |
| 15 | GO:0015976: carbon utilization | 3.35E-05 |
| 16 | GO:0019464: glycine decarboxylation via glycine cleavage system | 3.35E-05 |
| 17 | GO:0009409: response to cold | 6.76E-05 |
| 18 | GO:0010190: cytochrome b6f complex assembly | 7.90E-05 |
| 19 | GO:0006810: transport | 8.83E-05 |
| 20 | GO:0046686: response to cadmium ion | 1.07E-04 |
| 21 | GO:0006551: leucine metabolic process | 2.16E-04 |
| 22 | GO:0006096: glycolytic process | 2.22E-04 |
| 23 | GO:0009657: plastid organization | 2.29E-04 |
| 24 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.49E-04 |
| 25 | GO:0009773: photosynthetic electron transport in photosystem I | 4.49E-04 |
| 26 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.81E-04 |
| 27 | GO:2000123: positive regulation of stomatal complex development | 4.81E-04 |
| 28 | GO:0043039: tRNA aminoacylation | 4.81E-04 |
| 29 | GO:0006695: cholesterol biosynthetic process | 4.81E-04 |
| 30 | GO:0009853: photorespiration | 6.48E-04 |
| 31 | GO:0006518: peptide metabolic process | 7.83E-04 |
| 32 | GO:0071492: cellular response to UV-A | 7.83E-04 |
| 33 | GO:0006696: ergosterol biosynthetic process | 7.83E-04 |
| 34 | GO:0006000: fructose metabolic process | 7.83E-04 |
| 35 | GO:0010581: regulation of starch biosynthetic process | 7.83E-04 |
| 36 | GO:0061077: chaperone-mediated protein folding | 1.09E-03 |
| 37 | GO:0033014: tetrapyrrole biosynthetic process | 1.12E-03 |
| 38 | GO:0016556: mRNA modification | 1.12E-03 |
| 39 | GO:0001678: cellular glucose homeostasis | 1.12E-03 |
| 40 | GO:2001141: regulation of RNA biosynthetic process | 1.12E-03 |
| 41 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.12E-03 |
| 42 | GO:0046902: regulation of mitochondrial membrane permeability | 1.12E-03 |
| 43 | GO:0080092: regulation of pollen tube growth | 1.18E-03 |
| 44 | GO:2000038: regulation of stomatal complex development | 1.48E-03 |
| 45 | GO:0009902: chloroplast relocation | 1.48E-03 |
| 46 | GO:0006542: glutamine biosynthetic process | 1.48E-03 |
| 47 | GO:0019676: ammonia assimilation cycle | 1.48E-03 |
| 48 | GO:0071486: cellular response to high light intensity | 1.48E-03 |
| 49 | GO:0045727: positive regulation of translation | 1.48E-03 |
| 50 | GO:0016117: carotenoid biosynthetic process | 1.51E-03 |
| 51 | GO:0009735: response to cytokinin | 1.74E-03 |
| 52 | GO:0006461: protein complex assembly | 1.89E-03 |
| 53 | GO:0010375: stomatal complex patterning | 1.89E-03 |
| 54 | GO:0042549: photosystem II stabilization | 2.33E-03 |
| 55 | GO:0016554: cytidine to uridine editing | 2.33E-03 |
| 56 | GO:0009082: branched-chain amino acid biosynthetic process | 2.80E-03 |
| 57 | GO:0006458: 'de novo' protein folding | 2.80E-03 |
| 58 | GO:0009099: valine biosynthetic process | 2.80E-03 |
| 59 | GO:0009854: oxidative photosynthetic carbon pathway | 2.80E-03 |
| 60 | GO:0046835: carbohydrate phosphorylation | 2.80E-03 |
| 61 | GO:0042026: protein refolding | 2.80E-03 |
| 62 | GO:0009817: defense response to fungus, incompatible interaction | 4.06E-03 |
| 63 | GO:0019430: removal of superoxide radicals | 4.38E-03 |
| 64 | GO:0009097: isoleucine biosynthetic process | 4.38E-03 |
| 65 | GO:0032544: plastid translation | 4.38E-03 |
| 66 | GO:0017004: cytochrome complex assembly | 4.38E-03 |
| 67 | GO:0006002: fructose 6-phosphate metabolic process | 4.38E-03 |
| 68 | GO:0071482: cellular response to light stimulus | 4.38E-03 |
| 69 | GO:0010119: regulation of stomatal movement | 4.69E-03 |
| 70 | GO:0010206: photosystem II repair | 4.95E-03 |
| 71 | GO:0033384: geranyl diphosphate biosynthetic process | 4.95E-03 |
| 72 | GO:0006783: heme biosynthetic process | 4.95E-03 |
| 73 | GO:0006754: ATP biosynthetic process | 4.95E-03 |
| 74 | GO:0009051: pentose-phosphate shunt, oxidative branch | 4.95E-03 |
| 75 | GO:0045337: farnesyl diphosphate biosynthetic process | 4.95E-03 |
| 76 | GO:0016051: carbohydrate biosynthetic process | 5.14E-03 |
| 77 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.56E-03 |
| 78 | GO:1900865: chloroplast RNA modification | 5.56E-03 |
| 79 | GO:0010380: regulation of chlorophyll biosynthetic process | 5.56E-03 |
| 80 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 6.18E-03 |
| 81 | GO:0006535: cysteine biosynthetic process from serine | 6.18E-03 |
| 82 | GO:0043069: negative regulation of programmed cell death | 6.18E-03 |
| 83 | GO:0045036: protein targeting to chloroplast | 6.18E-03 |
| 84 | GO:0009744: response to sucrose | 6.63E-03 |
| 85 | GO:0006415: translational termination | 6.84E-03 |
| 86 | GO:0009073: aromatic amino acid family biosynthetic process | 6.84E-03 |
| 87 | GO:0043085: positive regulation of catalytic activity | 6.84E-03 |
| 88 | GO:0006352: DNA-templated transcription, initiation | 6.84E-03 |
| 89 | GO:0000272: polysaccharide catabolic process | 6.84E-03 |
| 90 | GO:0006006: glucose metabolic process | 8.22E-03 |
| 91 | GO:0006094: gluconeogenesis | 8.22E-03 |
| 92 | GO:0009767: photosynthetic electron transport chain | 8.22E-03 |
| 93 | GO:0005986: sucrose biosynthetic process | 8.22E-03 |
| 94 | GO:0010207: photosystem II assembly | 8.94E-03 |
| 95 | GO:0010020: chloroplast fission | 8.94E-03 |
| 96 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.05E-02 |
| 97 | GO:0080147: root hair cell development | 1.12E-02 |
| 98 | GO:0019344: cysteine biosynthetic process | 1.12E-02 |
| 99 | GO:0045454: cell redox homeostasis | 1.16E-02 |
| 100 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.21E-02 |
| 101 | GO:0006418: tRNA aminoacylation for protein translation | 1.21E-02 |
| 102 | GO:0008152: metabolic process | 1.71E-02 |
| 103 | GO:0000271: polysaccharide biosynthetic process | 1.74E-02 |
| 104 | GO:0042631: cellular response to water deprivation | 1.74E-02 |
| 105 | GO:0045489: pectin biosynthetic process | 1.83E-02 |
| 106 | GO:0006633: fatty acid biosynthetic process | 2.01E-02 |
| 107 | GO:0019252: starch biosynthetic process | 2.02E-02 |
| 108 | GO:0009791: post-embryonic development | 2.02E-02 |
| 109 | GO:0007623: circadian rhythm | 2.21E-02 |
| 110 | GO:1901657: glycosyl compound metabolic process | 2.33E-02 |
| 111 | GO:0042742: defense response to bacterium | 2.36E-02 |
| 112 | GO:0007267: cell-cell signaling | 2.54E-02 |
| 113 | GO:0010027: thylakoid membrane organization | 2.76E-02 |
| 114 | GO:0009816: defense response to bacterium, incompatible interaction | 2.87E-02 |
| 115 | GO:0042128: nitrate assimilation | 2.99E-02 |
| 116 | GO:0009416: response to light stimulus | 3.11E-02 |
| 117 | GO:0018298: protein-chromophore linkage | 3.34E-02 |
| 118 | GO:0000160: phosphorelay signal transduction system | 3.46E-02 |
| 119 | GO:0010218: response to far red light | 3.58E-02 |
| 120 | GO:0007568: aging | 3.70E-02 |
| 121 | GO:0009637: response to blue light | 3.95E-02 |
| 122 | GO:0005975: carbohydrate metabolic process | 4.33E-02 |
| 123 | GO:0006839: mitochondrial transport | 4.33E-02 |
| 124 | GO:0006631: fatty acid metabolic process | 4.46E-02 |
| 125 | GO:0046777: protein autophosphorylation | 4.52E-02 |
| 126 | GO:0006508: proteolysis | 4.70E-02 |
| 127 | GO:0010114: response to red light | 4.73E-02 |
| 128 | GO:0009644: response to high light intensity | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 2 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 3 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 4 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 5 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 6 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 7 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 8 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 9 | GO:0004618: phosphoglycerate kinase activity | 2.19E-06 |
| 10 | GO:0004148: dihydrolipoyl dehydrogenase activity | 8.00E-06 |
| 11 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.83E-05 |
| 12 | GO:0005528: FK506 binding | 5.37E-05 |
| 13 | GO:0004033: aldo-keto reductase (NADP) activity | 1.85E-04 |
| 14 | GO:0004325: ferrochelatase activity | 2.16E-04 |
| 15 | GO:0051996: squalene synthase activity | 2.16E-04 |
| 16 | GO:0003984: acetolactate synthase activity | 2.16E-04 |
| 17 | GO:0030941: chloroplast targeting sequence binding | 2.16E-04 |
| 18 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.16E-04 |
| 19 | GO:0004831: tyrosine-tRNA ligase activity | 2.16E-04 |
| 20 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 4.49E-04 |
| 21 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.81E-04 |
| 22 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 4.81E-04 |
| 23 | GO:0050017: L-3-cyanoalanine synthase activity | 4.81E-04 |
| 24 | GO:0042389: omega-3 fatty acid desaturase activity | 4.81E-04 |
| 25 | GO:0010297: heteropolysaccharide binding | 4.81E-04 |
| 26 | GO:0004047: aminomethyltransferase activity | 4.81E-04 |
| 27 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.81E-04 |
| 28 | GO:0004089: carbonate dehydratase activity | 5.83E-04 |
| 29 | GO:0016787: hydrolase activity | 9.34E-04 |
| 30 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.08E-03 |
| 31 | GO:0016149: translation release factor activity, codon specific | 1.12E-03 |
| 32 | GO:0017057: 6-phosphogluconolactonase activity | 1.12E-03 |
| 33 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 1.12E-03 |
| 34 | GO:0005536: glucose binding | 1.48E-03 |
| 35 | GO:0004659: prenyltransferase activity | 1.48E-03 |
| 36 | GO:0004396: hexokinase activity | 1.48E-03 |
| 37 | GO:0001053: plastid sigma factor activity | 1.48E-03 |
| 38 | GO:0019158: mannokinase activity | 1.48E-03 |
| 39 | GO:0005319: lipid transporter activity | 1.48E-03 |
| 40 | GO:0051861: glycolipid binding | 1.48E-03 |
| 41 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.48E-03 |
| 42 | GO:0008453: alanine-glyoxylate transaminase activity | 1.48E-03 |
| 43 | GO:0016987: sigma factor activity | 1.48E-03 |
| 44 | GO:0005471: ATP:ADP antiporter activity | 1.89E-03 |
| 45 | GO:0004356: glutamate-ammonia ligase activity | 1.89E-03 |
| 46 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.89E-03 |
| 47 | GO:0042578: phosphoric ester hydrolase activity | 2.33E-03 |
| 48 | GO:0008200: ion channel inhibitor activity | 2.33E-03 |
| 49 | GO:0080030: methyl indole-3-acetate esterase activity | 2.33E-03 |
| 50 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.80E-03 |
| 51 | GO:0004124: cysteine synthase activity | 2.80E-03 |
| 52 | GO:0051920: peroxiredoxin activity | 2.80E-03 |
| 53 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.80E-03 |
| 54 | GO:0016597: amino acid binding | 2.95E-03 |
| 55 | GO:0016168: chlorophyll binding | 3.30E-03 |
| 56 | GO:0016209: antioxidant activity | 3.82E-03 |
| 57 | GO:0008236: serine-type peptidase activity | 3.86E-03 |
| 58 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 4.38E-03 |
| 59 | GO:0004222: metalloendopeptidase activity | 4.48E-03 |
| 60 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 4.95E-03 |
| 61 | GO:0003747: translation release factor activity | 4.95E-03 |
| 62 | GO:0004337: geranyltranstransferase activity | 4.95E-03 |
| 63 | GO:0005509: calcium ion binding | 6.10E-03 |
| 64 | GO:0008047: enzyme activator activity | 6.18E-03 |
| 65 | GO:0044183: protein binding involved in protein folding | 6.84E-03 |
| 66 | GO:0004161: dimethylallyltranstransferase activity | 6.84E-03 |
| 67 | GO:0051537: 2 iron, 2 sulfur cluster binding | 7.17E-03 |
| 68 | GO:0031072: heat shock protein binding | 8.22E-03 |
| 69 | GO:0003824: catalytic activity | 8.26E-03 |
| 70 | GO:0031409: pigment binding | 1.05E-02 |
| 71 | GO:0016740: transferase activity | 1.11E-02 |
| 72 | GO:0022857: transmembrane transporter activity | 1.20E-02 |
| 73 | GO:0051082: unfolded protein binding | 1.28E-02 |
| 74 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.37E-02 |
| 75 | GO:0022891: substrate-specific transmembrane transporter activity | 1.46E-02 |
| 76 | GO:0003756: protein disulfide isomerase activity | 1.55E-02 |
| 77 | GO:0016758: transferase activity, transferring hexosyl groups | 1.56E-02 |
| 78 | GO:0019843: rRNA binding | 1.60E-02 |
| 79 | GO:0004812: aminoacyl-tRNA ligase activity | 1.64E-02 |
| 80 | GO:0050662: coenzyme binding | 1.93E-02 |
| 81 | GO:0004791: thioredoxin-disulfide reductase activity | 1.93E-02 |
| 82 | GO:0016853: isomerase activity | 1.93E-02 |
| 83 | GO:0019901: protein kinase binding | 2.02E-02 |
| 84 | GO:0048038: quinone binding | 2.12E-02 |
| 85 | GO:0000156: phosphorelay response regulator activity | 2.33E-02 |
| 86 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.33E-02 |
| 87 | GO:0008483: transaminase activity | 2.54E-02 |
| 88 | GO:0042802: identical protein binding | 2.81E-02 |
| 89 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.99E-02 |
| 90 | GO:0004683: calmodulin-dependent protein kinase activity | 3.10E-02 |
| 91 | GO:0102483: scopolin beta-glucosidase activity | 3.10E-02 |
| 92 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 3.22E-02 |
| 93 | GO:0016491: oxidoreductase activity | 3.53E-02 |
| 94 | GO:0050897: cobalt ion binding | 3.70E-02 |
| 95 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 4.07E-02 |
| 96 | GO:0008422: beta-glucosidase activity | 4.20E-02 |
| 97 | GO:0050661: NADP binding | 4.33E-02 |
| 98 | GO:0004185: serine-type carboxypeptidase activity | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.74E-43 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.63E-21 |
| 4 | GO:0009941: chloroplast envelope | 1.10E-20 |
| 5 | GO:0009570: chloroplast stroma | 9.29E-18 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 7.15E-15 |
| 7 | GO:0009579: thylakoid | 3.05E-14 |
| 8 | GO:0031977: thylakoid lumen | 5.65E-09 |
| 9 | GO:0010319: stromule | 1.41E-08 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 7.64E-08 |
| 11 | GO:0030095: chloroplast photosystem II | 6.41E-07 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 1.76E-06 |
| 13 | GO:0019898: extrinsic component of membrane | 9.07E-06 |
| 14 | GO:0005960: glycine cleavage complex | 1.83E-05 |
| 15 | GO:0048046: apoplast | 2.60E-05 |
| 16 | GO:0009534: chloroplast thylakoid | 2.65E-05 |
| 17 | GO:0009523: photosystem II | 1.87E-04 |
| 18 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 2.16E-04 |
| 19 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.16E-04 |
| 20 | GO:0009706: chloroplast inner membrane | 3.02E-04 |
| 21 | GO:0009707: chloroplast outer membrane | 4.80E-04 |
| 22 | GO:0042170: plastid membrane | 4.81E-04 |
| 23 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 4.81E-04 |
| 24 | GO:0055035: plastid thylakoid membrane | 1.89E-03 |
| 25 | GO:0031969: chloroplast membrane | 1.89E-03 |
| 26 | GO:0010287: plastoglobule | 2.50E-03 |
| 27 | GO:0031359: integral component of chloroplast outer membrane | 3.30E-03 |
| 28 | GO:0009533: chloroplast stromal thylakoid | 3.30E-03 |
| 29 | GO:0016324: apical plasma membrane | 6.18E-03 |
| 30 | GO:0031307: integral component of mitochondrial outer membrane | 7.51E-03 |
| 31 | GO:0000311: plastid large ribosomal subunit | 7.51E-03 |
| 32 | GO:0009508: plastid chromosome | 8.22E-03 |
| 33 | GO:0030076: light-harvesting complex | 9.69E-03 |
| 34 | GO:0005875: microtubule associated complex | 1.05E-02 |
| 35 | GO:0042651: thylakoid membrane | 1.21E-02 |
| 36 | GO:0009532: plastid stroma | 1.29E-02 |
| 37 | GO:0009522: photosystem I | 1.93E-02 |
| 38 | GO:0005778: peroxisomal membrane | 2.54E-02 |
| 39 | GO:0009295: nucleoid | 2.54E-02 |