GO Enrichment Analysis of Co-expressed Genes with
AT3G02900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051290: protein heterotetramerization | 0.00E+00 |
| 2 | GO:1901671: positive regulation of superoxide dismutase activity | 0.00E+00 |
| 3 | GO:0015822: ornithine transport | 0.00E+00 |
| 4 | GO:0016048: detection of temperature stimulus | 0.00E+00 |
| 5 | GO:0080094: response to trehalose-6-phosphate | 0.00E+00 |
| 6 | GO:0035998: 7,8-dihydroneopterin 3'-triphosphate biosynthetic process | 0.00E+00 |
| 7 | GO:0006342: chromatin silencing | 8.28E-08 |
| 8 | GO:0006458: 'de novo' protein folding | 1.05E-05 |
| 9 | GO:0042026: protein refolding | 1.05E-05 |
| 10 | GO:0000105: histidine biosynthetic process | 1.93E-05 |
| 11 | GO:0044030: regulation of DNA methylation | 2.48E-05 |
| 12 | GO:0006169: adenosine salvage | 5.03E-05 |
| 13 | GO:0000066: mitochondrial ornithine transport | 5.03E-05 |
| 14 | GO:0006006: glucose metabolic process | 7.50E-05 |
| 15 | GO:0000719: photoreactive repair | 1.23E-04 |
| 16 | GO:0019388: galactose catabolic process | 1.23E-04 |
| 17 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.23E-04 |
| 18 | GO:0006152: purine nucleoside catabolic process | 1.23E-04 |
| 19 | GO:0007584: response to nutrient | 1.23E-04 |
| 20 | GO:0061077: chaperone-mediated protein folding | 1.54E-04 |
| 21 | GO:0007005: mitochondrion organization | 1.70E-04 |
| 22 | GO:0070828: heterochromatin organization | 2.11E-04 |
| 23 | GO:0045489: pectin biosynthetic process | 2.60E-04 |
| 24 | GO:0009650: UV protection | 3.09E-04 |
| 25 | GO:0009590: detection of gravity | 3.09E-04 |
| 26 | GO:0006986: response to unfolded protein | 3.09E-04 |
| 27 | GO:0051085: chaperone mediated protein folding requiring cofactor | 3.09E-04 |
| 28 | GO:0009743: response to carbohydrate | 3.09E-04 |
| 29 | GO:0046686: response to cadmium ion | 4.59E-04 |
| 30 | GO:0010236: plastoquinone biosynthetic process | 5.26E-04 |
| 31 | GO:0044209: AMP salvage | 5.26E-04 |
| 32 | GO:0070814: hydrogen sulfide biosynthetic process | 6.44E-04 |
| 33 | GO:0046855: inositol phosphate dephosphorylation | 6.44E-04 |
| 34 | GO:0046654: tetrahydrofolate biosynthetic process | 7.68E-04 |
| 35 | GO:0006400: tRNA modification | 8.97E-04 |
| 36 | GO:0052543: callose deposition in cell wall | 1.03E-03 |
| 37 | GO:0005978: glycogen biosynthetic process | 1.03E-03 |
| 38 | GO:0006002: fructose 6-phosphate metabolic process | 1.17E-03 |
| 39 | GO:0048193: Golgi vesicle transport | 1.17E-03 |
| 40 | GO:0009056: catabolic process | 1.32E-03 |
| 41 | GO:0006096: glycolytic process | 1.50E-03 |
| 42 | GO:0000103: sulfate assimilation | 1.63E-03 |
| 43 | GO:0051555: flavonol biosynthetic process | 1.63E-03 |
| 44 | GO:0009970: cellular response to sulfate starvation | 1.63E-03 |
| 45 | GO:0000272: polysaccharide catabolic process | 1.79E-03 |
| 46 | GO:0048229: gametophyte development | 1.79E-03 |
| 47 | GO:0046856: phosphatidylinositol dephosphorylation | 1.79E-03 |
| 48 | GO:0006541: glutamine metabolic process | 2.32E-03 |
| 49 | GO:0010020: chloroplast fission | 2.32E-03 |
| 50 | GO:0019253: reductive pentose-phosphate cycle | 2.32E-03 |
| 51 | GO:0006334: nucleosome assembly | 3.29E-03 |
| 52 | GO:0010468: regulation of gene expression | 3.66E-03 |
| 53 | GO:0009411: response to UV | 3.71E-03 |
| 54 | GO:0040007: growth | 3.71E-03 |
| 55 | GO:0000271: polysaccharide biosynthetic process | 4.37E-03 |
| 56 | GO:0010087: phloem or xylem histogenesis | 4.37E-03 |
| 57 | GO:0010182: sugar mediated signaling pathway | 4.60E-03 |
| 58 | GO:0019252: starch biosynthetic process | 5.07E-03 |
| 59 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 5.32E-03 |
| 60 | GO:0016032: viral process | 5.56E-03 |
| 61 | GO:0009630: gravitropism | 5.56E-03 |
| 62 | GO:0010252: auxin homeostasis | 6.07E-03 |
| 63 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 7.12E-03 |
| 64 | GO:0016051: carbohydrate biosynthetic process | 9.73E-03 |
| 65 | GO:0009637: response to blue light | 9.73E-03 |
| 66 | GO:0006839: mitochondrial transport | 1.07E-02 |
| 67 | GO:0009744: response to sucrose | 1.16E-02 |
| 68 | GO:0009846: pollen germination | 1.37E-02 |
| 69 | GO:0009909: regulation of flower development | 1.54E-02 |
| 70 | GO:0016569: covalent chromatin modification | 1.77E-02 |
| 71 | GO:0009058: biosynthetic process | 2.24E-02 |
| 72 | GO:0009790: embryo development | 2.41E-02 |
| 73 | GO:0009658: chloroplast organization | 3.71E-02 |
| 74 | GO:0006970: response to osmotic stress | 3.91E-02 |
| 75 | GO:0009409: response to cold | 4.21E-02 |
| 76 | GO:0080167: response to karrikin | 4.32E-02 |
| 77 | GO:0006810: transport | 4.56E-02 |
| 78 | GO:0015979: photosynthesis | 4.75E-02 |
| 79 | GO:0045892: negative regulation of transcription, DNA-templated | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003934: GTP cyclohydrolase I activity | 0.00E+00 |
| 2 | GO:0003904: deoxyribodipyrimidine photo-lyase activity | 0.00E+00 |
| 3 | GO:0047974: guanosine deaminase activity | 0.00E+00 |
| 4 | GO:0016833: oxo-acid-lyase activity | 0.00E+00 |
| 5 | GO:0000107: imidazoleglycerol-phosphate synthase activity | 0.00E+00 |
| 6 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 7 | GO:0046982: protein heterodimerization activity | 2.10E-09 |
| 8 | GO:0003677: DNA binding | 1.03E-05 |
| 9 | GO:0004400: histidinol-phosphate transaminase activity | 5.03E-05 |
| 10 | GO:0004001: adenosine kinase activity | 5.03E-05 |
| 11 | GO:0044183: protein binding involved in protein folding | 5.51E-05 |
| 12 | GO:0004614: phosphoglucomutase activity | 1.23E-04 |
| 13 | GO:0004566: beta-glucuronidase activity | 1.23E-04 |
| 14 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.23E-04 |
| 15 | GO:0000064: L-ornithine transmembrane transporter activity | 1.23E-04 |
| 16 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 1.23E-04 |
| 17 | GO:0051082: unfolded protein binding | 1.60E-04 |
| 18 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 2.11E-04 |
| 19 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 2.11E-04 |
| 20 | GO:0003913: DNA photolyase activity | 2.11E-04 |
| 21 | GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity | 2.11E-04 |
| 22 | GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity | 3.09E-04 |
| 23 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 3.09E-04 |
| 24 | GO:0001872: (1->3)-beta-D-glucan binding | 3.09E-04 |
| 25 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 3.09E-04 |
| 26 | GO:0004784: superoxide dismutase activity | 6.44E-04 |
| 27 | GO:0102229: amylopectin maltohydrolase activity | 6.44E-04 |
| 28 | GO:0016161: beta-amylase activity | 7.68E-04 |
| 29 | GO:0003872: 6-phosphofructokinase activity | 8.97E-04 |
| 30 | GO:0008081: phosphoric diester hydrolase activity | 2.14E-03 |
| 31 | GO:0016758: transferase activity, transferring hexosyl groups | 2.18E-03 |
| 32 | GO:0051087: chaperone binding | 3.08E-03 |
| 33 | GO:0008194: UDP-glycosyltransferase activity | 3.43E-03 |
| 34 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 3.50E-03 |
| 35 | GO:0016757: transferase activity, transferring glycosyl groups | 7.43E-03 |
| 36 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.68E-03 |
| 37 | GO:0030247: polysaccharide binding | 7.68E-03 |
| 38 | GO:0050661: NADP binding | 1.07E-02 |
| 39 | GO:0042393: histone binding | 1.07E-02 |
| 40 | GO:0005198: structural molecule activity | 1.26E-02 |
| 41 | GO:0051287: NAD binding | 1.33E-02 |
| 42 | GO:0016787: hydrolase activity | 1.63E-02 |
| 43 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.73E-02 |
| 44 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.73E-02 |
| 45 | GO:0005507: copper ion binding | 2.19E-02 |
| 46 | GO:0005525: GTP binding | 2.53E-02 |
| 47 | GO:0000287: magnesium ion binding | 3.66E-02 |
| 48 | GO:0003682: chromatin binding | 3.86E-02 |
| 49 | GO:0052689: carboxylic ester hydrolase activity | 4.64E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000788: nuclear nucleosome | 0.00E+00 |
| 2 | GO:0005721: pericentric heterochromatin | 0.00E+00 |
| 3 | GO:0000786: nucleosome | 1.29E-14 |
| 4 | GO:0000790: nuclear chromatin | 5.77E-08 |
| 5 | GO:0009570: chloroplast stroma | 1.55E-06 |
| 6 | GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex | 5.03E-05 |
| 7 | GO:0005730: nucleolus | 8.78E-05 |
| 8 | GO:0000792: heterochromatin | 1.23E-04 |
| 9 | GO:0010319: stromule | 4.15E-04 |
| 10 | GO:0009579: thylakoid | 5.29E-04 |
| 11 | GO:0009507: chloroplast | 1.01E-03 |
| 12 | GO:0042644: chloroplast nucleoid | 1.32E-03 |
| 13 | GO:0005765: lysosomal membrane | 1.79E-03 |
| 14 | GO:0048046: apoplast | 2.02E-03 |
| 15 | GO:0009941: chloroplast envelope | 3.17E-03 |
| 16 | GO:0009295: nucleoid | 6.33E-03 |
| 17 | GO:0009536: plastid | 8.01E-03 |
| 18 | GO:0009707: chloroplast outer membrane | 8.24E-03 |
| 19 | GO:0000139: Golgi membrane | 9.08E-03 |
| 20 | GO:0022626: cytosolic ribosome | 1.47E-02 |
| 21 | GO:0009535: chloroplast thylakoid membrane | 1.72E-02 |
| 22 | GO:0005634: nucleus | 2.21E-02 |
| 23 | GO:0005802: trans-Golgi network | 2.47E-02 |
| 24 | GO:0005759: mitochondrial matrix | 2.54E-02 |
| 25 | GO:0005768: endosome | 2.81E-02 |
| 26 | GO:0005794: Golgi apparatus | 3.18E-02 |
| 27 | GO:0046658: anchored component of plasma membrane | 3.32E-02 |
| 28 | GO:0009505: plant-type cell wall | 3.90E-02 |
| 29 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.96E-02 |
| 30 | GO:0031969: chloroplast membrane | 4.32E-02 |
| 31 | GO:0005829: cytosol | 4.40E-02 |