Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G02820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051290: protein heterotetramerization0.00E+00
2GO:1901671: positive regulation of superoxide dismutase activity0.00E+00
3GO:0016048: detection of temperature stimulus0.00E+00
4GO:0031508: pericentric heterochromatin assembly0.00E+00
5GO:0080094: response to trehalose-6-phosphate0.00E+00
6GO:0006269: DNA replication, synthesis of RNA primer3.97E-08
7GO:0010424: DNA methylation on cytosine within a CG sequence3.97E-08
8GO:0006342: chromatin silencing1.20E-06
9GO:0042026: protein refolding2.93E-06
10GO:0006458: 'de novo' protein folding2.93E-06
11GO:0044030: regulation of DNA methylation7.19E-06
12GO:0010216: maintenance of DNA methylation1.68E-05
13GO:0045004: DNA replication proofreading2.30E-05
14GO:0006169: adenosine salvage2.30E-05
15GO:0006287: base-excision repair, gap-filling2.30E-05
16GO:0061077: chaperone-mediated protein folding5.09E-05
17GO:0007005: mitochondrion organization5.66E-05
18GO:0006297: nucleotide-excision repair, DNA gap filling5.89E-05
19GO:0090309: positive regulation of methylation-dependent chromatin silencing5.89E-05
20GO:0006272: leading strand elongation5.89E-05
21GO:0045717: negative regulation of fatty acid biosynthetic process5.89E-05
22GO:0009662: etioplast organization5.89E-05
23GO:0071158: positive regulation of cell cycle arrest5.89E-05
24GO:0010086: embryonic root morphogenesis5.89E-05
25GO:0010069: zygote asymmetric cytokinesis in embryo sac5.89E-05
26GO:0051301: cell division8.42E-05
27GO:0070828: heterochromatin organization1.04E-04
28GO:0000727: double-strand break repair via break-induced replication1.04E-04
29GO:0032776: DNA methylation on cytosine1.04E-04
30GO:0035066: positive regulation of histone acetylation1.04E-04
31GO:0006986: response to unfolded protein1.55E-04
32GO:0051085: chaperone mediated protein folding requiring cofactor1.55E-04
33GO:0035067: negative regulation of histone acetylation1.55E-04
34GO:0000278: mitotic cell cycle2.73E-04
35GO:0044209: AMP salvage2.73E-04
36GO:0042793: transcription from plastid promoter3.37E-04
37GO:0048579: negative regulation of long-day photoperiodism, flowering3.37E-04
38GO:0006260: DNA replication4.47E-04
39GO:0006400: tRNA modification4.74E-04
40GO:0006002: fructose 6-phosphate metabolic process6.21E-04
41GO:0016569: covalent chromatin modification6.57E-04
42GO:0051726: regulation of cell cycle7.35E-04
43GO:0006349: regulation of gene expression by genetic imprinting7.77E-04
44GO:0006325: chromatin organization8.59E-04
45GO:0006270: DNA replication initiation1.20E-03
46GO:0009934: regulation of meristem structural organization1.20E-03
47GO:0010468: regulation of gene expression1.38E-03
48GO:0051302: regulation of cell division1.59E-03
49GO:0009658: chloroplast organization1.78E-03
50GO:0009294: DNA mediated transformation1.91E-03
51GO:0007049: cell cycle1.98E-03
52GO:0042127: regulation of cell proliferation2.02E-03
53GO:0007059: chromosome segregation2.48E-03
54GO:0016032: viral process2.84E-03
55GO:0046686: response to cadmium ion3.04E-03
56GO:0006310: DNA recombination3.09E-03
57GO:0006281: DNA repair3.21E-03
58GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.62E-03
59GO:0009910: negative regulation of flower development4.60E-03
60GO:0006457: protein folding7.34E-03
61GO:0009909: regulation of flower development7.70E-03
62GO:0006096: glycolytic process8.06E-03
63GO:0043086: negative regulation of catalytic activity8.06E-03
64GO:0009058: biosynthetic process1.11E-02
65GO:0009790: embryo development1.20E-02
66GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.74E-02
67GO:0006970: response to osmotic stress1.94E-02
68GO:0048366: leaf development2.06E-02
69GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.19E-02
70GO:0015979: photosynthesis2.35E-02
71GO:0045892: negative regulation of transcription, DNA-templated2.46E-02
72GO:0009908: flower development3.96E-02
73GO:0009735: response to cytokinin3.99E-02
RankGO TermAdjusted P value
1GO:0003896: DNA primase activity3.97E-08
2GO:0003677: DNA binding7.17E-07
3GO:0046982: protein heterodimerization activity6.71E-06
4GO:0044183: protein binding involved in protein folding1.68E-05
5GO:0004001: adenosine kinase activity2.30E-05
6GO:0008310: single-stranded DNA 3'-5' exodeoxyribonuclease activity2.30E-05
7GO:0003887: DNA-directed DNA polymerase activity3.57E-05
8GO:0051082: unfolded protein binding3.61E-05
9GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity1.04E-04
10GO:0010429: methyl-CpNpN binding1.04E-04
11GO:0010428: methyl-CpNpG binding1.04E-04
12GO:0003682: chromatin binding1.69E-04
13GO:0010385: double-stranded methylated DNA binding2.12E-04
14GO:0003697: single-stranded DNA binding2.87E-04
15GO:0003886: DNA (cytosine-5-)-methyltransferase activity4.04E-04
16GO:0043138: 3'-5' DNA helicase activity4.04E-04
17GO:0003872: 6-phosphofructokinase activity4.74E-04
18GO:0008327: methyl-CpG binding9.42E-04
19GO:0005507: copper ion binding1.12E-03
20GO:0051087: chaperone binding1.59E-03
21GO:0003713: transcription coactivator activity2.36E-03
22GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity2.36E-03
23GO:0016759: cellulose synthase activity3.09E-03
24GO:0008483: transaminase activity3.22E-03
25GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.46E-03
26GO:0051539: 4 iron, 4 sulfur cluster binding5.36E-03
27GO:0042393: histone binding5.36E-03
28GO:0004386: helicase activity9.75E-03
29GO:0005524: ATP binding1.05E-02
30GO:0030170: pyridoxal phosphate binding1.16E-02
31GO:0046910: pectinesterase inhibitor activity1.28E-02
32GO:0008017: microtubule binding1.39E-02
33GO:0004842: ubiquitin-protein transferase activity1.59E-02
34GO:0008168: methyltransferase activity1.79E-02
35GO:0061630: ubiquitin protein ligase activity2.22E-02
36GO:0003924: GTPase activity2.83E-02
RankGO TermAdjusted P value
1GO:0005721: pericentric heterochromatin0.00E+00
2GO:0000940: condensed chromosome outer kinetochore0.00E+00
3GO:0000786: nucleosome9.43E-08
4GO:0005658: alpha DNA polymerase:primase complex1.55E-07
5GO:0000790: nuclear chromatin9.10E-07
6GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex2.30E-05
7GO:0008622: epsilon DNA polymerase complex2.30E-05
8GO:0031436: BRCA1-BARD1 complex2.30E-05
9GO:0000792: heterochromatin5.89E-05
10GO:0070531: BRCA1-A complex1.04E-04
11GO:0000811: GINS complex1.04E-04
12GO:0031298: replication fork protection complex2.12E-04
13GO:0010369: chromocenter4.04E-04
14GO:0042644: chloroplast nucleoid6.98E-04
15GO:0005720: nuclear heterochromatin6.98E-04
16GO:0005876: spindle microtubule7.77E-04
17GO:0009579: thylakoid9.06E-04
18GO:0048046: apoplast1.76E-03
19GO:0005634: nucleus2.21E-03
20GO:0009295: nucleoid3.22E-03
21GO:0009506: plasmodesma3.22E-03
22GO:0005730: nucleolus3.37E-03
23GO:0022626: cytosolic ribosome5.43E-03
24GO:0005622: intracellular1.01E-02
25GO:0009941: chloroplast envelope1.23E-02
26GO:0005759: mitochondrial matrix1.26E-02
27GO:0009570: chloroplast stroma1.88E-02
Gene type



Gene DE type