co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G02460

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009594: detection of nutrient	0.00E+00
2	GO:0010111: glyoxysome organization	0.00E+00
3	GO:0010213: non-photoreactive DNA repair	7.41E-06
4	GO:0019395: fatty acid oxidation	2.00E-05
5	GO:0003006: developmental process involved in reproduction	1.30E-04
6	GO:0010050: vegetative phase change	1.88E-04
7	GO:0030091: protein repair	2.20E-04
8	GO:0019375: galactolipid biosynthetic process	2.20E-04
9	GO:0006289: nucleotide-excision repair	6.20E-04
10	GO:0009695: jasmonic acid biosynthetic process	6.61E-04
11	GO:0031408: oxylipin biosynthetic process	7.02E-04
12	GO:0030433: ubiquitin-dependent ERAD pathway	7.45E-04
13	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.75E-04
14	GO:0080022: primary root development	9.19E-04
15	GO:0010182: sugar mediated signaling pathway	9.64E-04
16	GO:0008654: phospholipid biosynthetic process	1.06E-03
17	GO:0006635: fatty acid beta-oxidation	1.10E-03
18	GO:0016579: protein deubiquitination	1.35E-03
19	GO:0009738: abscisic acid-activated signaling pathway	1.41E-03
20	GO:0042128: nitrate assimilation	1.50E-03
21	GO:0009631: cold acclimation	1.84E-03
22	GO:0034599: cellular response to oxidative stress	2.01E-03
23	GO:0006897: endocytosis	2.19E-03
24	GO:0000209: protein polyubiquitination	2.38E-03
25	GO:0010224: response to UV-B	2.89E-03
26	GO:0006633: fatty acid biosynthetic process	4.88E-03
27	GO:0016036: cellular response to phosphate starvation	4.96E-03
28	GO:0010150: leaf senescence	5.21E-03
29	GO:0006970: response to osmotic stress	7.41E-03
30	GO:0006886: intracellular protein transport	9.48E-03
31	GO:0006629: lipid metabolic process	1.07E-02
32	GO:0009408: response to heat	1.07E-02
33	GO:0006281: DNA repair	1.07E-02
34	GO:0009611: response to wounding	1.64E-02
35	GO:0035556: intracellular signal transduction	1.68E-02
36	GO:0006457: protein folding	1.94E-02
37	GO:0006511: ubiquitin-dependent protein catabolic process	2.01E-02
38	GO:0005975: carbohydrate metabolic process	3.59E-02

Rank	GO Term	Adjusted P value
1	GO:0070191: methionine-R-sulfoxide reductase activity	0.00E+00
2	GO:0034450: ubiquitin-ubiquitin ligase activity	7.41E-06
3	GO:0003988: acetyl-CoA C-acyltransferase activity	2.00E-05
4	GO:0004180: carboxypeptidase activity	3.67E-05
5	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.59E-04
6	GO:0008195: phosphatidate phosphatase activity	1.59E-04
7	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.59E-04
8	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	7.02E-04
9	GO:0004527: exonuclease activity	9.64E-04
10	GO:0004518: nuclease activity	1.15E-03
11	GO:0004197: cysteine-type endopeptidase activity	1.15E-03
12	GO:0008236: serine-type peptidase activity	1.61E-03
13	GO:0003697: single-stranded DNA binding	1.95E-03
14	GO:0004519: endonuclease activity	1.14E-02
15	GO:0008289: lipid binding	1.36E-02
16	GO:0000166: nucleotide binding	1.61E-02
17	GO:0046872: metal ion binding	2.78E-02
18	GO:0004672: protein kinase activity	3.51E-02
19	GO:0003729: mRNA binding	3.54E-02
20	GO:0016787: hydrolase activity	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0000152: nuclear ubiquitin ligase complex	7.41E-06
2	GO:0030131: clathrin adaptor complex	2.20E-04
3	GO:0009514: glyoxysome	2.52E-04
4	GO:0030125: clathrin vesicle coat	3.54E-04
5	GO:0005905: clathrin-coated pit	7.02E-04
6	GO:0000151: ubiquitin ligase complex	1.67E-03
7	GO:0005777: peroxisome	1.78E-02
8	GO:0005783: endoplasmic reticulum	2.02E-02
9	GO:0005802: trans-Golgi network	2.26E-02
10	GO:0005768: endosome	2.47E-02
11	GO:0000139: Golgi membrane	3.31E-02
12	GO:0005730: nucleolus	3.88E-02
13	GO:0016020: membrane	4.44E-02