Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G02110

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015739: sialic acid transport0.00E+00
2GO:0010430: fatty acid omega-oxidation0.00E+00
3GO:0033494: ferulate metabolic process0.00E+00
4GO:0005996: monosaccharide metabolic process0.00E+00
5GO:0007638: mechanosensory behavior0.00E+00
6GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
7GO:0090393: sepal giant cell development0.00E+00
8GO:0071555: cell wall organization1.17E-06
9GO:0010411: xyloglucan metabolic process1.58E-05
10GO:0007155: cell adhesion1.86E-05
11GO:0006810: transport4.14E-05
12GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly5.99E-05
13GO:0006166: purine ribonucleoside salvage5.99E-05
14GO:0006168: adenine salvage5.99E-05
15GO:0042546: cell wall biogenesis7.02E-05
16GO:0009773: photosynthetic electron transport in photosystem I7.80E-05
17GO:0010037: response to carbon dioxide1.05E-04
18GO:0015976: carbon utilization1.05E-04
19GO:2000122: negative regulation of stomatal complex development1.05E-04
20GO:0006546: glycine catabolic process1.05E-04
21GO:0007267: cell-cell signaling1.19E-04
22GO:0045490: pectin catabolic process1.26E-04
23GO:0044209: AMP salvage1.63E-04
24GO:0019510: S-adenosylhomocysteine catabolic process4.23E-04
25GO:0010442: guard cell morphogenesis4.23E-04
26GO:0071370: cellular response to gibberellin stimulus4.23E-04
27GO:0046520: sphingoid biosynthetic process4.23E-04
28GO:1901599: (-)-pinoresinol biosynthetic process4.23E-04
29GO:0042742: defense response to bacterium5.49E-04
30GO:0032544: plastid translation6.14E-04
31GO:0010583: response to cyclopentenone8.10E-04
32GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.16E-04
33GO:0030388: fructose 1,6-bisphosphate metabolic process9.16E-04
34GO:2000123: positive regulation of stomatal complex development9.16E-04
35GO:0052541: plant-type cell wall cellulose metabolic process9.16E-04
36GO:0006695: cholesterol biosynthetic process9.16E-04
37GO:0033353: S-adenosylmethionine cycle9.16E-04
38GO:0060919: auxin influx9.16E-04
39GO:0018119: peptidyl-cysteine S-nitrosylation1.16E-03
40GO:0071492: cellular response to UV-A1.49E-03
41GO:0015840: urea transport1.49E-03
42GO:0006065: UDP-glucuronate biosynthetic process1.49E-03
43GO:0090506: axillary shoot meristem initiation1.49E-03
44GO:0006000: fructose metabolic process1.49E-03
45GO:0010020: chloroplast fission1.70E-03
46GO:0006833: water transport2.13E-03
47GO:0043572: plastid fission2.15E-03
48GO:0032877: positive regulation of DNA endoreduplication2.15E-03
49GO:0007231: osmosensory signaling pathway2.15E-03
50GO:0006241: CTP biosynthetic process2.15E-03
51GO:0080170: hydrogen peroxide transmembrane transport2.15E-03
52GO:0006165: nucleoside diphosphate phosphorylation2.15E-03
53GO:0006228: UTP biosynthetic process2.15E-03
54GO:0016051: carbohydrate biosynthetic process2.24E-03
55GO:0015979: photosynthesis2.74E-03
56GO:0061077: chaperone-mediated protein folding2.86E-03
57GO:0006542: glutamine biosynthetic process2.89E-03
58GO:0019676: ammonia assimilation cycle2.89E-03
59GO:0071486: cellular response to high light intensity2.89E-03
60GO:0019464: glycine decarboxylation via glycine cleavage system2.89E-03
61GO:0009765: photosynthesis, light harvesting2.89E-03
62GO:0006085: acetyl-CoA biosynthetic process2.89E-03
63GO:0006183: GTP biosynthetic process2.89E-03
64GO:0045727: positive regulation of translation2.89E-03
65GO:0033500: carbohydrate homeostasis2.89E-03
66GO:0031122: cytoplasmic microtubule organization2.89E-03
67GO:2000038: regulation of stomatal complex development2.89E-03
68GO:0006749: glutathione metabolic process2.89E-03
69GO:0045454: cell redox homeostasis2.98E-03
70GO:0030245: cellulose catabolic process3.13E-03
71GO:0055114: oxidation-reduction process3.38E-03
72GO:0006869: lipid transport3.51E-03
73GO:0016123: xanthophyll biosynthetic process3.71E-03
74GO:0010375: stomatal complex patterning3.71E-03
75GO:0046785: microtubule polymerization3.71E-03
76GO:0019722: calcium-mediated signaling3.71E-03
77GO:0016120: carotene biosynthetic process3.71E-03
78GO:0006656: phosphatidylcholine biosynthetic process3.71E-03
79GO:0034220: ion transmembrane transport4.35E-03
80GO:0000271: polysaccharide biosynthetic process4.35E-03
81GO:0042335: cuticle development4.35E-03
82GO:0010405: arabinogalactan protein metabolic process4.59E-03
83GO:0006796: phosphate-containing compound metabolic process4.59E-03
84GO:0016554: cytidine to uridine editing4.59E-03
85GO:0010190: cytochrome b6f complex assembly4.59E-03
86GO:0018258: protein O-linked glycosylation via hydroxyproline4.59E-03
87GO:0035435: phosphate ion transmembrane transport4.59E-03
88GO:0045489: pectin biosynthetic process4.69E-03
89GO:0010555: response to mannitol5.53E-03
90GO:0009955: adaxial/abaxial pattern specification5.53E-03
91GO:0042372: phylloquinone biosynthetic process5.53E-03
92GO:0045926: negative regulation of growth5.53E-03
93GO:0010067: procambium histogenesis5.53E-03
94GO:1901259: chloroplast rRNA processing5.53E-03
95GO:0009658: chloroplast organization6.21E-03
96GO:0050790: regulation of catalytic activity6.54E-03
97GO:0030497: fatty acid elongation6.54E-03
98GO:0010090: trichome morphogenesis6.61E-03
99GO:0042545: cell wall modification6.85E-03
100GO:0006875: cellular metal ion homeostasis7.60E-03
101GO:0006402: mRNA catabolic process7.60E-03
102GO:0009819: drought recovery7.60E-03
103GO:0009642: response to light intensity7.60E-03
104GO:0009932: cell tip growth8.73E-03
105GO:0006002: fructose 6-phosphate metabolic process8.73E-03
106GO:0009657: plastid organization8.73E-03
107GO:0009409: response to cold9.53E-03
108GO:0048589: developmental growth9.92E-03
109GO:0015780: nucleotide-sugar transport9.92E-03
110GO:0010206: photosystem II repair9.92E-03
111GO:0045337: farnesyl diphosphate biosynthetic process9.92E-03
112GO:0033384: geranyl diphosphate biosynthetic process9.92E-03
113GO:0009735: response to cytokinin1.00E-02
114GO:0009817: defense response to fungus, incompatible interaction1.10E-02
115GO:1900865: chloroplast RNA modification1.12E-02
116GO:0000160: phosphorelay signal transduction system1.16E-02
117GO:0009407: toxin catabolic process1.21E-02
118GO:0005975: carbohydrate metabolic process1.22E-02
119GO:0043069: negative regulation of programmed cell death1.24E-02
120GO:0048829: root cap development1.24E-02
121GO:0009870: defense response signaling pathway, resistance gene-dependent1.24E-02
122GO:0019538: protein metabolic process1.24E-02
123GO:0006633: fatty acid biosynthetic process1.27E-02
124GO:0010119: regulation of stomatal movement1.27E-02
125GO:0046686: response to cadmium ion1.28E-02
126GO:0009684: indoleacetic acid biosynthetic process1.38E-02
127GO:0000038: very long-chain fatty acid metabolic process1.38E-02
128GO:0019684: photosynthesis, light reaction1.38E-02
129GO:0006816: calcium ion transport1.38E-02
130GO:0009089: lysine biosynthetic process via diaminopimelate1.38E-02
131GO:0000272: polysaccharide catabolic process1.38E-02
132GO:0006415: translational termination1.38E-02
133GO:0009807: lignan biosynthetic process1.38E-02
134GO:0045037: protein import into chloroplast stroma1.52E-02
135GO:2000028: regulation of photoperiodism, flowering1.66E-02
136GO:0050826: response to freezing1.66E-02
137GO:0009725: response to hormone1.66E-02
138GO:0006094: gluconeogenesis1.66E-02
139GO:0009767: photosynthetic electron transport chain1.66E-02
140GO:0005986: sucrose biosynthetic process1.66E-02
141GO:0006631: fatty acid metabolic process1.66E-02
142GO:0055085: transmembrane transport1.77E-02
143GO:0009617: response to bacterium1.79E-02
144GO:0010223: secondary shoot formation1.81E-02
145GO:0010143: cutin biosynthetic process1.81E-02
146GO:0010207: photosystem II assembly1.81E-02
147GO:0007034: vacuolar transport1.81E-02
148GO:0019253: reductive pentose-phosphate cycle1.81E-02
149GO:0008643: carbohydrate transport1.95E-02
150GO:0070588: calcium ion transmembrane transport1.96E-02
151GO:0005985: sucrose metabolic process1.96E-02
152GO:0009636: response to toxic substance2.03E-02
153GO:0006071: glycerol metabolic process2.12E-02
154GO:0010025: wax biosynthetic process2.12E-02
155GO:0006636: unsaturated fatty acid biosynthetic process2.12E-02
156GO:0019344: cysteine biosynthetic process2.29E-02
157GO:0007010: cytoskeleton organization2.29E-02
158GO:0009736: cytokinin-activated signaling pathway2.44E-02
159GO:0010026: trichome differentiation2.45E-02
160GO:0009768: photosynthesis, light harvesting in photosystem I2.45E-02
161GO:0007017: microtubule-based process2.45E-02
162GO:0016998: cell wall macromolecule catabolic process2.62E-02
163GO:0003333: amino acid transmembrane transport2.62E-02
164GO:0080092: regulation of pollen tube growth2.80E-02
165GO:0019748: secondary metabolic process2.80E-02
166GO:0006730: one-carbon metabolic process2.80E-02
167GO:0001944: vasculature development2.98E-02
168GO:0009294: DNA mediated transformation2.98E-02
169GO:0010089: xylem development3.16E-02
170GO:0006284: base-excision repair3.16E-02
171GO:0016117: carotenoid biosynthetic process3.34E-02
172GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.39E-02
173GO:0000413: protein peptidyl-prolyl isomerization3.54E-02
174GO:0010087: phloem or xylem histogenesis3.54E-02
175GO:0042631: cellular response to water deprivation3.54E-02
176GO:0080022: primary root development3.54E-02
177GO:0009741: response to brassinosteroid3.73E-02
178GO:0019252: starch biosynthetic process4.13E-02
179GO:0071554: cell wall organization or biogenesis4.33E-02
180GO:0007264: small GTPase mediated signal transduction4.54E-02
181GO:1901657: glycosyl compound metabolic process4.75E-02
RankGO TermAdjusted P value
1GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity0.00E+00
2GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
3GO:0050613: delta14-sterol reductase activity0.00E+00
4GO:0015136: sialic acid transmembrane transporter activity0.00E+00
5GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
6GO:0045435: lycopene epsilon cyclase activity0.00E+00
7GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
8GO:0051920: peroxiredoxin activity7.62E-08
9GO:0016209: antioxidant activity2.69E-07
10GO:0016762: xyloglucan:xyloglucosyl transferase activity4.01E-06
11GO:0016798: hydrolase activity, acting on glycosyl bonds1.58E-05
12GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.49E-05
13GO:0003999: adenine phosphoribosyltransferase activity5.99E-05
14GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.05E-04
15GO:0016722: oxidoreductase activity, oxidizing metal ions1.19E-04
16GO:0030570: pectate lyase activity3.76E-04
17GO:0019843: rRNA binding3.85E-04
18GO:0044715: 8-oxo-dGDP phosphatase activity4.23E-04
19GO:0042349: guiding stereospecific synthesis activity4.23E-04
20GO:0000170: sphingosine hydroxylase activity4.23E-04
21GO:0047259: glucomannan 4-beta-mannosyltransferase activity4.23E-04
22GO:0004560: alpha-L-fucosidase activity4.23E-04
23GO:0004013: adenosylhomocysteinase activity4.23E-04
24GO:0080132: fatty acid alpha-hydroxylase activity4.23E-04
25GO:0008568: microtubule-severing ATPase activity4.23E-04
26GO:0015088: copper uptake transmembrane transporter activity4.23E-04
27GO:0008967: phosphoglycolate phosphatase activity9.16E-04
28GO:0042389: omega-3 fatty acid desaturase activity9.16E-04
29GO:0010297: heteropolysaccharide binding9.16E-04
30GO:0004047: aminomethyltransferase activity9.16E-04
31GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity9.16E-04
32GO:0042284: sphingolipid delta-4 desaturase activity9.16E-04
33GO:0046593: mandelonitrile lyase activity9.16E-04
34GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase9.16E-04
35GO:0000234: phosphoethanolamine N-methyltransferase activity9.16E-04
36GO:0080109: indole-3-acetonitrile nitrile hydratase activity9.16E-04
37GO:0030599: pectinesterase activity1.26E-03
38GO:0003979: UDP-glucose 6-dehydrogenase activity1.49E-03
39GO:0005504: fatty acid binding1.49E-03
40GO:0050734: hydroxycinnamoyltransferase activity1.49E-03
41GO:0004148: dihydrolipoyl dehydrogenase activity1.49E-03
42GO:0080061: indole-3-acetonitrile nitrilase activity1.49E-03
43GO:0004089: carbonate dehydratase activity1.51E-03
44GO:0000257: nitrilase activity2.15E-03
45GO:0003878: ATP citrate synthase activity2.15E-03
46GO:0004375: glycine dehydrogenase (decarboxylating) activity2.15E-03
47GO:0016149: translation release factor activity, codon specific2.15E-03
48GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.15E-03
49GO:0004550: nucleoside diphosphate kinase activity2.15E-03
50GO:0005528: FK506 binding2.36E-03
51GO:0015204: urea transmembrane transporter activity2.89E-03
52GO:0004659: prenyltransferase activity2.89E-03
53GO:0045430: chalcone isomerase activity2.89E-03
54GO:0010328: auxin influx transmembrane transporter activity2.89E-03
55GO:1990137: plant seed peroxidase activity2.89E-03
56GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.13E-03
57GO:0008810: cellulase activity3.42E-03
58GO:0004356: glutamate-ammonia ligase activity3.71E-03
59GO:0008725: DNA-3-methyladenine glycosylase activity3.71E-03
60GO:0009922: fatty acid elongase activity3.71E-03
61GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.77E-03
62GO:0008200: ion channel inhibitor activity4.59E-03
63GO:1990714: hydroxyproline O-galactosyltransferase activity4.59E-03
64GO:0016208: AMP binding4.59E-03
65GO:0016462: pyrophosphatase activity4.59E-03
66GO:0042578: phosphoric ester hydrolase activity4.59E-03
67GO:0045330: aspartyl esterase activity5.16E-03
68GO:0051753: mannan synthase activity5.53E-03
69GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity5.53E-03
70GO:0016832: aldehyde-lyase activity5.53E-03
71GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.53E-03
72GO:0048038: quinone binding5.80E-03
73GO:0004601: peroxidase activity6.21E-03
74GO:0005338: nucleotide-sugar transmembrane transporter activity6.54E-03
75GO:0004427: inorganic diphosphatase activity6.54E-03
76GO:0000156: phosphorelay response regulator activity6.61E-03
77GO:0016759: cellulose synthase activity7.04E-03
78GO:0005507: copper ion binding7.19E-03
79GO:0005200: structural constituent of cytoskeleton7.48E-03
80GO:0004564: beta-fructofuranosidase activity7.60E-03
81GO:0008289: lipid binding7.68E-03
82GO:0015250: water channel activity8.41E-03
83GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.73E-03
84GO:0016168: chlorophyll binding8.89E-03
85GO:0016758: transferase activity, transferring hexosyl groups9.16E-03
86GO:0003747: translation release factor activity9.92E-03
87GO:0004337: geranyltranstransferase activity9.92E-03
88GO:0008889: glycerophosphodiester phosphodiesterase activity9.92E-03
89GO:0052689: carboxylic ester hydrolase activity1.00E-02
90GO:0004575: sucrose alpha-glucosidase activity1.12E-02
91GO:0005381: iron ion transmembrane transporter activity1.12E-02
92GO:0004161: dimethylallyltranstransferase activity1.38E-02
93GO:0005089: Rho guanyl-nucleotide exchange factor activity1.38E-02
94GO:0004860: protein kinase inhibitor activity1.38E-02
95GO:0005262: calcium channel activity1.66E-02
96GO:0015114: phosphate ion transmembrane transporter activity1.66E-02
97GO:0004565: beta-galactosidase activity1.66E-02
98GO:0004364: glutathione transferase activity1.73E-02
99GO:0008083: growth factor activity1.81E-02
100GO:0042802: identical protein binding1.94E-02
101GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.12E-02
102GO:0031409: pigment binding2.12E-02
103GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.12E-02
104GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.12E-02
105GO:0051287: NAD binding2.19E-02
106GO:0004857: enzyme inhibitor activity2.29E-02
107GO:0005516: calmodulin binding2.36E-02
108GO:0043424: protein histidine kinase binding2.45E-02
109GO:0004176: ATP-dependent peptidase activity2.62E-02
110GO:0033612: receptor serine/threonine kinase binding2.62E-02
111GO:0016757: transferase activity, transferring glycosyl groups2.87E-02
112GO:0045735: nutrient reservoir activity2.88E-02
113GO:0022891: substrate-specific transmembrane transporter activity2.98E-02
114GO:0008514: organic anion transmembrane transporter activity3.16E-02
115GO:0004650: polygalacturonase activity3.17E-02
116GO:0005102: receptor binding3.34E-02
117GO:0050662: coenzyme binding3.93E-02
118GO:0004872: receptor activity4.13E-02
119GO:0019901: protein kinase binding4.13E-02
120GO:0042803: protein homodimerization activity4.30E-02
121GO:0003824: catalytic activity4.50E-02
122GO:0016829: lyase activity4.68E-02
RankGO TermAdjusted P value
1GO:0009571: proplastid stroma0.00E+00
2GO:0048046: apoplast3.55E-19
3GO:0009507: chloroplast1.18E-12
4GO:0009941: chloroplast envelope2.97E-12
5GO:0005576: extracellular region4.65E-12
6GO:0009535: chloroplast thylakoid membrane4.27E-11
7GO:0009505: plant-type cell wall1.55E-09
8GO:0009570: chloroplast stroma3.22E-09
9GO:0009579: thylakoid6.37E-09
10GO:0009543: chloroplast thylakoid lumen2.53E-08
11GO:0031225: anchored component of membrane3.36E-08
12GO:0005618: cell wall3.64E-08
13GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)7.19E-07
14GO:0046658: anchored component of plasma membrane4.19E-06
15GO:0031977: thylakoid lumen5.35E-05
16GO:0010319: stromule1.19E-04
17GO:0009534: chloroplast thylakoid1.23E-04
18GO:0009654: photosystem II oxygen evolving complex2.60E-04
19GO:0000139: Golgi membrane4.11E-04
20GO:0009344: nitrite reductase complex [NAD(P)H]4.23E-04
21GO:0005886: plasma membrane7.34E-04
22GO:0000427: plastid-encoded plastid RNA polymerase complex9.16E-04
23GO:0042170: plastid membrane9.16E-04
24GO:0009706: chloroplast inner membrane1.38E-03
25GO:0005853: eukaryotic translation elongation factor 1 complex1.49E-03
26GO:0030095: chloroplast photosystem II1.70E-03
27GO:0005775: vacuolar lumen2.15E-03
28GO:0005960: glycine cleavage complex2.15E-03
29GO:0009346: citrate lyase complex2.15E-03
30GO:0016020: membrane2.20E-03
31GO:0042651: thylakoid membrane2.60E-03
32GO:0031897: Tic complex2.89E-03
33GO:0010168: ER body4.59E-03
34GO:0019898: extrinsic component of membrane5.42E-03
35GO:0000815: ESCRT III complex5.53E-03
36GO:0009533: chloroplast stromal thylakoid6.54E-03
37GO:0042807: central vacuole6.54E-03
38GO:0005778: peroxisomal membrane7.48E-03
39GO:0000326: protein storage vacuole8.73E-03
40GO:0009539: photosystem II reaction center8.73E-03
41GO:0005811: lipid particle8.73E-03
42GO:0010287: plastoglobule8.84E-03
43GO:0005763: mitochondrial small ribosomal subunit9.92E-03
44GO:0045298: tubulin complex9.92E-03
45GO:0055028: cortical microtubule1.24E-02
46GO:0016324: apical plasma membrane1.24E-02
47GO:0000325: plant-type vacuole1.27E-02
48GO:0009506: plasmodesma1.35E-02
49GO:0048471: perinuclear region of cytoplasm1.38E-02
50GO:0005840: ribosome1.56E-02
51GO:0005794: Golgi apparatus1.89E-02
52GO:0030076: light-harvesting complex1.96E-02
53GO:0030176: integral component of endoplasmic reticulum membrane1.96E-02
54GO:0005875: microtubule associated complex2.12E-02
55GO:0005758: mitochondrial intermembrane space2.29E-02
56GO:0009532: plastid stroma2.62E-02
57GO:0031969: chloroplast membrane3.25E-02
58GO:0022626: cytosolic ribosome3.41E-02
59GO:0005773: vacuole3.64E-02
60GO:0009522: photosystem I3.93E-02
61GO:0009523: photosystem II4.13E-02
Gene type



Gene DE type