co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G02090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006425: glutaminyl-tRNA aminoacylation	0.00E+00
2	GO:0018920: glyphosate metabolic process	8.12E-06
3	GO:0006422: aspartyl-tRNA aminoacylation	8.12E-06
4	GO:0015865: purine nucleotide transport	2.19E-05
5	GO:0006065: UDP-glucuronate biosynthetic process	3.99E-05
6	GO:0052546: cell wall pectin metabolic process	3.99E-05
7	GO:0006424: glutamyl-tRNA aminoacylation	6.14E-05
8	GO:0046902: regulation of mitochondrial membrane permeability	6.14E-05
9	GO:0018279: protein N-linked glycosylation via asparagine	1.12E-04
10	GO:0045116: protein neddylation	1.12E-04
11	GO:0009735: response to cytokinin	1.17E-04
12	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.41E-04
13	GO:0006458: 'de novo' protein folding	1.71E-04
14	GO:0009423: chorismate biosynthetic process	1.71E-04
15	GO:0042773: ATP synthesis coupled electron transport	2.04E-04
16	GO:0009073: aromatic amino acid family biosynthetic process	4.19E-04
17	GO:0006807: nitrogen compound metabolic process	4.98E-04
18	GO:0046686: response to cadmium ion	6.06E-04
19	GO:0034976: response to endoplasmic reticulum stress	6.22E-04
20	GO:0030150: protein import into mitochondrial matrix	6.66E-04
21	GO:0061077: chaperone-mediated protein folding	7.53E-04
22	GO:0007131: reciprocal meiotic recombination	7.99E-04
23	GO:0010193: response to ozone	1.18E-03
24	GO:0010252: auxin homeostasis	1.34E-03
25	GO:0009651: response to salt stress	1.56E-03
26	GO:0048481: plant ovule development	1.79E-03
27	GO:0009853: photorespiration	2.10E-03
28	GO:0006099: tricarboxylic acid cycle	2.16E-03
29	GO:0009965: leaf morphogenesis	2.69E-03
30	GO:0009664: plant-type cell wall organization	2.90E-03
31	GO:0006096: glycolytic process	3.40E-03
32	GO:0009058: biosynthetic process	4.67E-03
33	GO:0006413: translational initiation	5.35E-03
34	GO:0009826: unidimensional cell growth	7.40E-03
35	GO:0009793: embryo development ending in seed dormancy	7.44E-03
36	GO:0045454: cell redox homeostasis	1.00E-02
37	GO:0006281: DNA repair	1.16E-02
38	GO:0006397: mRNA processing	1.20E-02
39	GO:0009734: auxin-activated signaling pathway	1.48E-02
40	GO:0055085: transmembrane transport	2.06E-02
41	GO:0006457: protein folding	2.09E-02
42	GO:0055114: oxidation-reduction process	2.57E-02
43	GO:0009414: response to water deprivation	2.83E-02
44	GO:0006979: response to oxidative stress	2.90E-02
45	GO:0015031: protein transport	3.42E-02
46	GO:0006810: transport	3.79E-02
47	GO:0005975: carbohydrate metabolic process	3.88E-02

Rank	GO Term	Adjusted P value
1	GO:0004819: glutamine-tRNA ligase activity	0.00E+00
2	GO:0048037: cofactor binding	8.12E-06
3	GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity	8.12E-06
4	GO:0004815: aspartate-tRNA ligase activity	8.12E-06
5	GO:0004776: succinate-CoA ligase (GDP-forming) activity	2.19E-05
6	GO:0019781: NEDD8 activating enzyme activity	2.19E-05
7	GO:0004775: succinate-CoA ligase (ADP-forming) activity	2.19E-05
8	GO:0003979: UDP-glucose 6-dehydrogenase activity	3.99E-05
9	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	8.58E-05
10	GO:0005471: ATP:ADP antiporter activity	1.12E-04
11	GO:0008641: small protein activating enzyme activity	1.12E-04
12	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.12E-04
13	GO:0000166: nucleotide binding	1.32E-04
14	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.41E-04
15	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.41E-04
16	GO:0008143: poly(A) binding	2.04E-04
17	GO:0005507: copper ion binding	2.17E-04
18	GO:0008312: 7S RNA binding	2.37E-04
19	GO:0044183: protein binding involved in protein folding	4.19E-04
20	GO:0051536: iron-sulfur cluster binding	6.66E-04
21	GO:0003954: NADH dehydrogenase activity	6.66E-04
22	GO:0003756: protein disulfide isomerase activity	8.91E-04
23	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.18E-03
24	GO:0004721: phosphoprotein phosphatase activity	1.67E-03
25	GO:0004222: metalloendopeptidase activity	1.91E-03
26	GO:0050897: cobalt ion binding	1.97E-03
27	GO:0051539: 4 iron, 4 sulfur cluster binding	2.29E-03
28	GO:0051537: 2 iron, 2 sulfur cluster binding	2.62E-03
29	GO:0051287: NAD binding	2.83E-03
30	GO:0051082: unfolded protein binding	3.86E-03
31	GO:0030170: pyridoxal phosphate binding	4.83E-03
32	GO:0003743: translation initiation factor activity	6.25E-03
33	GO:0046872: metal ion binding	7.91E-03
34	GO:0009055: electron carrier activity	1.22E-02
35	GO:0005524: ATP binding	2.75E-02
36	GO:0016491: oxidoreductase activity	3.51E-02
37	GO:0003729: mRNA binding	3.83E-02

Rank	GO Term	Adjusted P value
1	GO:0005832: chaperonin-containing T-complex	0.00E+00
2	GO:0005829: cytosol	2.36E-07
3	GO:0005618: cell wall	2.34E-05
4	GO:0008250: oligosaccharyltransferase complex	1.12E-04
5	GO:0005774: vacuolar membrane	2.15E-04
6	GO:0005740: mitochondrial envelope	3.81E-04
7	GO:0005852: eukaryotic translation initiation factor 3 complex	4.19E-04
8	GO:0005750: mitochondrial respiratory chain complex III	5.39E-04
9	GO:0045271: respiratory chain complex I	7.09E-04
10	GO:0005743: mitochondrial inner membrane	8.76E-04
11	GO:0005744: mitochondrial inner membrane presequence translocase complex	8.91E-04
12	GO:0005737: cytoplasm	1.19E-03
13	GO:0005788: endoplasmic reticulum lumen	1.56E-03
14	GO:0005773: vacuole	2.78E-03
15	GO:0031966: mitochondrial membrane	2.90E-03
16	GO:0005747: mitochondrial respiratory chain complex I	3.48E-03
17	GO:0005783: endoplasmic reticulum	3.93E-03
18	GO:0005759: mitochondrial matrix	5.26E-03
19	GO:0005730: nucleolus	5.44E-03
20	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	8.10E-03
21	GO:0009506: plasmodesma	8.85E-03
22	GO:0016020: membrane	1.40E-02
23	GO:0005739: mitochondrion	2.12E-02
24	GO:0009536: plastid	3.33E-02
25	GO:0009505: plant-type cell wall	3.39E-02
26	GO:0005789: endoplasmic reticulum membrane	3.90E-02