Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G01490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045014: negative regulation of transcription by glucose0.00E+00
2GO:0033231: carbohydrate export0.00E+00
3GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
4GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
5GO:0009734: auxin-activated signaling pathway2.02E-05
6GO:0009733: response to auxin2.27E-05
7GO:1902334: fructose export from vacuole to cytoplasm4.60E-05
8GO:0015755: fructose transport4.60E-05
9GO:0043007: maintenance of rDNA4.60E-05
10GO:0009750: response to fructose4.81E-05
11GO:0009926: auxin polar transport5.14E-05
12GO:0006898: receptor-mediated endocytosis1.13E-04
13GO:0010541: acropetal auxin transport1.13E-04
14GO:0048443: stamen development1.81E-04
15GO:0010160: formation of animal organ boundary1.95E-04
16GO:0016045: detection of bacterium1.95E-04
17GO:0010359: regulation of anion channel activity1.95E-04
18GO:0010305: leaf vascular tissue pattern formation2.31E-04
19GO:0040008: regulation of growth2.70E-04
20GO:0043481: anthocyanin accumulation in tissues in response to UV light2.85E-04
21GO:0051513: regulation of monopolar cell growth2.85E-04
22GO:0010252: auxin homeostasis3.49E-04
23GO:0009228: thiamine biosynthetic process5.98E-04
24GO:0060918: auxin transport5.98E-04
25GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway5.98E-04
26GO:0009942: longitudinal axis specification7.13E-04
27GO:1900056: negative regulation of leaf senescence8.33E-04
28GO:0009640: photomorphogenesis8.61E-04
29GO:0046620: regulation of organ growth9.57E-04
30GO:0009664: plant-type cell wall organization1.07E-03
31GO:0007389: pattern specification process1.09E-03
32GO:0010206: photosystem II repair1.22E-03
33GO:0048589: developmental growth1.22E-03
34GO:0009638: phototropism1.36E-03
35GO:0006995: cellular response to nitrogen starvation1.51E-03
36GO:0009740: gibberellic acid mediated signaling pathway1.51E-03
37GO:0006949: syncytium formation1.51E-03
38GO:0009698: phenylpropanoid metabolic process1.66E-03
39GO:0052544: defense response by callose deposition in cell wall1.66E-03
40GO:0046856: phosphatidylinositol dephosphorylation1.66E-03
41GO:0010152: pollen maturation1.81E-03
42GO:0008361: regulation of cell size1.81E-03
43GO:0010588: cotyledon vascular tissue pattern formation1.98E-03
44GO:0009785: blue light signaling pathway1.98E-03
45GO:0030048: actin filament-based movement1.98E-03
46GO:0010540: basipetal auxin transport2.14E-03
47GO:0010030: positive regulation of seed germination2.31E-03
48GO:0006833: water transport2.49E-03
49GO:0009944: polarity specification of adaxial/abaxial axis2.67E-03
50GO:2000377: regulation of reactive oxygen species metabolic process2.67E-03
51GO:0007275: multicellular organism development2.70E-03
52GO:0007017: microtubule-based process2.85E-03
53GO:0055085: transmembrane transport2.95E-03
54GO:0016114: terpenoid biosynthetic process3.04E-03
55GO:0051260: protein homooligomerization3.04E-03
56GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.43E-03
57GO:0006284: base-excision repair3.63E-03
58GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.83E-03
59GO:0070417: cellular response to cold3.83E-03
60GO:0042631: cellular response to water deprivation4.04E-03
61GO:0080022: primary root development4.04E-03
62GO:0034220: ion transmembrane transport4.04E-03
63GO:0010087: phloem or xylem histogenesis4.04E-03
64GO:0009826: unidimensional cell growth4.05E-03
65GO:0071472: cellular response to salt stress4.25E-03
66GO:0009958: positive gravitropism4.25E-03
67GO:0009741: response to brassinosteroid4.25E-03
68GO:0009646: response to absence of light4.47E-03
69GO:0009749: response to glucose4.68E-03
70GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.91E-03
71GO:0010583: response to cyclopentenone5.13E-03
72GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway5.39E-03
73GO:0009639: response to red or far red light5.60E-03
74GO:0009828: plant-type cell wall loosening5.60E-03
75GO:0006869: lipid transport6.83E-03
76GO:0015995: chlorophyll biosynthetic process7.08E-03
77GO:0006281: DNA repair7.68E-03
78GO:0048364: root development8.02E-03
79GO:0010218: response to far red light8.14E-03
80GO:0048527: lateral root development8.41E-03
81GO:0009637: response to blue light8.96E-03
82GO:0009744: response to sucrose1.07E-02
83GO:0009416: response to light stimulus1.37E-02
84GO:0048367: shoot system development1.52E-02
85GO:0009742: brassinosteroid mediated signaling pathway1.77E-02
86GO:0016567: protein ubiquitination2.18E-02
87GO:0006633: fatty acid biosynthetic process2.34E-02
88GO:0007623: circadian rhythm2.50E-02
89GO:0009739: response to gibberellin2.71E-02
90GO:0006470: protein dephosphorylation2.75E-02
91GO:0009409: response to cold3.75E-02
92GO:0080167: response to karrikin3.98E-02
93GO:0046777: protein autophosphorylation4.18E-02
94GO:0005975: carbohydrate metabolic process4.20E-02
95GO:0045454: cell redox homeostasis4.52E-02
96GO:0045892: negative regulation of transcription, DNA-templated4.57E-02
RankGO TermAdjusted P value
1GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
2GO:0103007: indole-3-acetate carboxyl methyltransferase activity0.00E+00
3GO:0051749: indole acetic acid carboxyl methyltransferase activity0.00E+00
4GO:0015284: fructose uniporter activity0.00E+00
5GO:0010329: auxin efflux transmembrane transporter activity6.58E-05
6GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.13E-04
7GO:0005353: fructose transmembrane transporter activity1.13E-04
8GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity1.13E-04
9GO:0090729: toxin activity1.95E-04
10GO:0010011: auxin binding3.84E-04
11GO:0045300: acyl-[acyl-carrier-protein] desaturase activity4.88E-04
12GO:0008725: DNA-3-methyladenine glycosylase activity4.88E-04
13GO:0042578: phosphoric ester hydrolase activity5.98E-04
14GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity5.98E-04
15GO:0016832: aldehyde-lyase activity7.13E-04
16GO:0009672: auxin:proton symporter activity1.36E-03
17GO:0008289: lipid binding1.61E-03
18GO:0008794: arsenate reductase (glutaredoxin) activity1.66E-03
19GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1.81E-03
20GO:0031072: heat shock protein binding1.98E-03
21GO:0003774: motor activity2.14E-03
22GO:0051119: sugar transmembrane transporter activity2.31E-03
23GO:0003756: protein disulfide isomerase activity3.63E-03
24GO:0005515: protein binding4.87E-03
25GO:0016791: phosphatase activity5.60E-03
26GO:0005200: structural constituent of cytoskeleton5.84E-03
27GO:0015250: water channel activity6.32E-03
28GO:0004871: signal transducer activity6.53E-03
29GO:0008757: S-adenosylmethionine-dependent methyltransferase activity7.34E-03
30GO:0005096: GTPase activator activity7.87E-03
31GO:0016614: oxidoreductase activity, acting on CH-OH group of donors8.41E-03
32GO:0004185: serine-type carboxypeptidase activity1.07E-02
33GO:0051537: 2 iron, 2 sulfur cluster binding1.13E-02
34GO:0003777: microtubule motor activity1.42E-02
35GO:0004650: polygalacturonase activity1.59E-02
36GO:0051082: unfolded protein binding1.70E-02
37GO:0015035: protein disulfide oxidoreductase activity1.73E-02
38GO:0016829: lyase activity2.10E-02
39GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.38E-02
40GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.97E-02
41GO:0042802: identical protein binding2.97E-02
42GO:0000287: magnesium ion binding3.37E-02
43GO:0046872: metal ion binding3.38E-02
44GO:0016788: hydrolase activity, acting on ester bonds3.46E-02
45GO:0050660: flavin adenine dinucleotide binding3.79E-02
46GO:0004674: protein serine/threonine kinase activity3.97E-02
47GO:0052689: carboxylic ester hydrolase activity4.27E-02
48GO:0004722: protein serine/threonine phosphatase activity4.83E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0009531: secondary cell wall2.85E-04
3GO:0045298: tubulin complex1.22E-03
4GO:0005886: plasma membrane1.40E-03
5GO:0016459: myosin complex1.51E-03
6GO:0009534: chloroplast thylakoid2.77E-03
7GO:0009570: chloroplast stroma4.60E-03
8GO:0031977: thylakoid lumen1.01E-02
9GO:0009535: chloroplast thylakoid membrane1.48E-02
10GO:0010008: endosome membrane1.52E-02
11GO:0010287: plastoglobule1.92E-02
12GO:0009543: chloroplast thylakoid lumen1.99E-02
13GO:0005623: cell2.03E-02
14GO:0009705: plant-type vacuole membrane2.50E-02
15GO:0009505: plant-type cell wall3.47E-02
16GO:0005874: microtubule3.88E-02
17GO:0005773: vacuole4.35E-02
Gene type



Gene DE type