Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G47960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901969: positive regulation of polynucleotide 3'-phosphatase activity0.00E+00
2GO:0006266: DNA ligation0.00E+00
3GO:1901972: positive regulation of DNA-5-methylcytosine glycosylase activity0.00E+00
4GO:0006431: methionyl-tRNA aminoacylation2.75E-06
5GO:0046470: phosphatidylcholine metabolic process8.18E-05
6GO:0080111: DNA demethylation8.18E-05
7GO:0006303: double-strand break repair via nonhomologous end joining1.11E-04
8GO:0008202: steroid metabolic process1.44E-04
9GO:0010167: response to nitrate2.52E-04
10GO:0009749: response to glucose5.05E-04
11GO:0010583: response to cyclopentenone5.50E-04
12GO:0007165: signal transduction1.86E-03
13GO:0016192: vesicle-mediated transport3.84E-03
14GO:0046777: protein autophosphorylation3.88E-03
15GO:0006886: intracellular protein transport4.29E-03
16GO:0006869: lipid transport4.47E-03
17GO:0006281: DNA repair4.84E-03
18GO:0048364: root development4.98E-03
19GO:0009734: auxin-activated signaling pathway6.13E-03
20GO:0006468: protein phosphorylation6.81E-03
21GO:0035556: intracellular signal transduction7.47E-03
22GO:0055085: transmembrane transport8.49E-03
23GO:0009733: response to auxin1.28E-02
24GO:0046686: response to cadmium ion1.62E-02
RankGO TermAdjusted P value
1GO:0004825: methionine-tRNA ligase activity2.75E-06
2GO:0004142: diacylglycerol cholinephosphotransferase activity7.70E-06
3GO:0010385: double-stranded methylated DNA binding3.25E-05
4GO:0008142: oxysterol binding1.11E-04
5GO:0005543: phospholipid binding1.78E-04
6GO:0000049: tRNA binding1.96E-04
7GO:0003713: transcription coactivator activity4.60E-04
8GO:0005096: GTPase activator activity8.20E-04
9GO:0035091: phosphatidylinositol binding1.14E-03
10GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.81E-03
11GO:0005524: ATP binding3.33E-03
12GO:0008289: lipid binding6.08E-03
13GO:0016301: kinase activity1.49E-02
14GO:0004672: protein kinase activity1.55E-02
15GO:0005515: protein binding2.43E-02
16GO:0004674: protein serine/threonine kinase activity3.68E-02
RankGO TermAdjusted P value
1GO:0005634: nucleus2.60E-03
2GO:0005622: intracellular1.08E-02
3GO:0005886: plasma membrane2.12E-02
4GO:0005737: cytoplasm3.13E-02
5GO:0005773: vacuole3.88E-02
Gene type



Gene DE type