co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G47440

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015822: ornithine transport	0.00E+00
2	GO:1901485: positive regulation of transcription factor catabolic process	0.00E+00
3	GO:0090393: sepal giant cell development	0.00E+00
4	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
5	GO:0010583: response to cyclopentenone	5.05E-07
6	GO:0080167: response to karrikin	8.36E-06
7	GO:0000271: polysaccharide biosynthetic process	1.65E-04
8	GO:0009741: response to brassinosteroid	1.84E-04
9	GO:0045489: pectin biosynthetic process	1.84E-04
10	GO:0071555: cell wall organization	1.91E-04
11	GO:0033481: galacturonate biosynthetic process	2.36E-04
12	GO:0048438: floral whorl development	2.36E-04
13	GO:0000066: mitochondrial ornithine transport	2.36E-04
14	GO:0050691: regulation of defense response to virus by host	2.36E-04
15	GO:0071370: cellular response to gibberellin stimulus	2.36E-04
16	GO:0006723: cuticle hydrocarbon biosynthetic process	2.36E-04
17	GO:0010411: xyloglucan metabolic process	4.98E-04
18	GO:0010200: response to chitin	5.05E-04
19	GO:0000038: very long-chain fatty acid metabolic process	5.11E-04
20	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.24E-04
21	GO:0007154: cell communication	5.24E-04
22	GO:0071497: cellular response to freezing	5.24E-04
23	GO:0010220: positive regulation of vernalization response	5.24E-04
24	GO:0030036: actin cytoskeleton organization	6.63E-04
25	GO:0019419: sulfate reduction	8.52E-04
26	GO:0043447: alkane biosynthetic process	8.52E-04
27	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	8.52E-04
28	GO:0009751: response to salicylic acid	9.22E-04
29	GO:0042546: cell wall biogenesis	1.10E-03
30	GO:0032877: positive regulation of DNA endoreduplication	1.21E-03
31	GO:1902358: sulfate transmembrane transport	1.21E-03
32	GO:0051016: barbed-end actin filament capping	1.21E-03
33	GO:0031347: regulation of defense response	1.33E-03
34	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.35E-03
35	GO:0019722: calcium-mediated signaling	1.59E-03
36	GO:0046345: abscisic acid catabolic process	1.62E-03
37	GO:0006749: glutathione metabolic process	1.62E-03
38	GO:0042335: cuticle development	1.86E-03
39	GO:2000762: regulation of phenylpropanoid metabolic process	2.07E-03
40	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.47E-03
41	GO:0071554: cell wall organization or biogenesis	2.47E-03
42	GO:0000060: protein import into nucleus, translocation	2.55E-03
43	GO:0060918: auxin transport	2.55E-03
44	GO:1900425: negative regulation of defense response to bacterium	2.55E-03
45	GO:0009828: plant-type cell wall loosening	2.99E-03
46	GO:0009554: megasporogenesis	3.06E-03
47	GO:0010555: response to mannitol	3.06E-03
48	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.06E-03
49	GO:0010077: maintenance of inflorescence meristem identity	3.06E-03
50	GO:2000067: regulation of root morphogenesis	3.06E-03
51	GO:0045926: negative regulation of growth	3.06E-03
52	GO:0010076: maintenance of floral meristem identity	3.06E-03
53	GO:0030154: cell differentiation	3.08E-03
54	GO:0007267: cell-cell signaling	3.17E-03
55	GO:0009733: response to auxin	3.27E-03
56	GO:0050829: defense response to Gram-negative bacterium	3.61E-03
57	GO:0051510: regulation of unidimensional cell growth	3.61E-03
58	GO:0045010: actin nucleation	4.19E-03
59	GO:0052543: callose deposition in cell wall	4.19E-03
60	GO:0008610: lipid biosynthetic process	4.19E-03
61	GO:0006402: mRNA catabolic process	4.19E-03
62	GO:0009753: response to jasmonic acid	4.66E-03
63	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.79E-03
64	GO:0010099: regulation of photomorphogenesis	4.79E-03
65	GO:0022900: electron transport chain	4.79E-03
66	GO:0007186: G-protein coupled receptor signaling pathway	4.79E-03
67	GO:0009813: flavonoid biosynthetic process	4.87E-03
68	GO:0000902: cell morphogenesis	5.43E-03
69	GO:0051865: protein autoubiquitination	5.43E-03
70	GO:0009739: response to gibberellin	5.49E-03
71	GO:0016051: carbohydrate biosynthetic process	5.87E-03
72	GO:0009638: phototropism	6.09E-03
73	GO:0006357: regulation of transcription from RNA polymerase II promoter	6.42E-03
74	GO:0043069: negative regulation of programmed cell death	6.78E-03
75	GO:0000103: sulfate assimilation	6.78E-03
76	GO:0009750: response to fructose	7.50E-03
77	GO:1903507: negative regulation of nucleic acid-templated transcription	7.50E-03
78	GO:0000272: polysaccharide catabolic process	7.50E-03
79	GO:0009826: unidimensional cell growth	7.91E-03
80	GO:0016925: protein sumoylation	8.25E-03
81	GO:0016024: CDP-diacylglycerol biosynthetic process	8.25E-03
82	GO:0010582: floral meristem determinacy	8.25E-03
83	GO:2000028: regulation of photoperiodism, flowering	9.02E-03
84	GO:0018107: peptidyl-threonine phosphorylation	9.02E-03
85	GO:0010540: basipetal auxin transport	9.82E-03
86	GO:0034605: cellular response to heat	9.82E-03
87	GO:0010143: cutin biosynthetic process	9.82E-03
88	GO:0002237: response to molecule of bacterial origin	9.82E-03
89	GO:0009723: response to ethylene	1.00E-02
90	GO:0009585: red, far-red light phototransduction	1.02E-02
91	GO:0009969: xyloglucan biosynthetic process	1.06E-02
92	GO:0009225: nucleotide-sugar metabolic process	1.06E-02
93	GO:0005985: sucrose metabolic process	1.06E-02
94	GO:0006833: water transport	1.15E-02
95	GO:0010025: wax biosynthetic process	1.15E-02
96	GO:0005992: trehalose biosynthetic process	1.24E-02
97	GO:0019344: cysteine biosynthetic process	1.24E-02
98	GO:0019953: sexual reproduction	1.32E-02
99	GO:0010017: red or far-red light signaling pathway	1.51E-02
100	GO:0009742: brassinosteroid mediated signaling pathway	1.55E-02
101	GO:0009411: response to UV	1.61E-02
102	GO:0034220: ion transmembrane transport	1.91E-02
103	GO:0010087: phloem or xylem histogenesis	1.91E-02
104	GO:0048653: anther development	1.91E-02
105	GO:0000226: microtubule cytoskeleton organization	1.91E-02
106	GO:0080022: primary root development	1.91E-02
107	GO:0010268: brassinosteroid homeostasis	2.01E-02
108	GO:0009958: positive gravitropism	2.01E-02
109	GO:0009791: post-embryonic development	2.23E-02
110	GO:0009749: response to glucose	2.23E-02
111	GO:0006633: fatty acid biosynthetic process	2.30E-02
112	GO:0016132: brassinosteroid biosynthetic process	2.34E-02
113	GO:0040008: regulation of growth	2.41E-02
114	GO:0007264: small GTPase mediated signal transduction	2.45E-02
115	GO:0048235: pollen sperm cell differentiation	2.45E-02
116	GO:0006468: protein phosphorylation	2.56E-02
117	GO:0016125: sterol metabolic process	2.68E-02
118	GO:0019760: glucosinolate metabolic process	2.68E-02
119	GO:0009639: response to red or far red light	2.68E-02
120	GO:0009734: auxin-activated signaling pathway	2.75E-02
121	GO:0016126: sterol biosynthetic process	3.04E-02
122	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.16E-02
123	GO:0048573: photoperiodism, flowering	3.41E-02
124	GO:0009738: abscisic acid-activated signaling pathway	3.52E-02
125	GO:0016311: dephosphorylation	3.54E-02
126	GO:0048767: root hair elongation	3.80E-02
127	GO:0009407: toxin catabolic process	3.93E-02
128	GO:0010218: response to far red light	3.93E-02
129	GO:0007568: aging	4.07E-02
130	GO:0048527: lateral root development	4.07E-02
131	GO:0010119: regulation of stomatal movement	4.07E-02
132	GO:0009860: pollen tube growth	4.20E-02
133	GO:0009637: response to blue light	4.34E-02
134	GO:0007049: cell cycle	4.35E-02
135	GO:0006839: mitochondrial transport	4.76E-02
136	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0045430: chalcone isomerase activity	3.91E-05
2	GO:0044212: transcription regulatory region DNA binding	1.91E-04
3	GO:0008252: nucleotidase activity	2.36E-04
4	GO:0080132: fatty acid alpha-hydroxylase activity	2.36E-04
5	GO:0003838: sterol 24-C-methyltransferase activity	2.36E-04
6	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	5.24E-04
7	GO:0000064: L-ornithine transmembrane transporter activity	5.24E-04
8	GO:0048531: beta-1,3-galactosyltransferase activity	5.24E-04
9	GO:0009973: adenylyl-sulfate reductase activity	5.24E-04
10	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	5.24E-04
11	GO:0001664: G-protein coupled receptor binding	8.52E-04
12	GO:0031683: G-protein beta/gamma-subunit complex binding	8.52E-04
13	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	8.52E-04
14	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.12E-03
15	GO:0001872: (1->3)-beta-D-glucan binding	1.21E-03
16	GO:0033843: xyloglucan 6-xylosyltransferase activity	1.21E-03
17	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.35E-03
18	GO:0050378: UDP-glucuronate 4-epimerase activity	1.62E-03
19	GO:0031386: protein tag	2.07E-03
20	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.47E-03
21	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.55E-03
22	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.55E-03
23	GO:0035252: UDP-xylosyltransferase activity	2.55E-03
24	GO:0016759: cellulose synthase activity	2.99E-03
25	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.05E-03
26	GO:0016758: transferase activity, transferring hexosyl groups	3.06E-03
27	GO:0016161: beta-amylase activity	3.06E-03
28	GO:0016413: O-acetyltransferase activity	3.36E-03
29	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.59E-03
30	GO:0016621: cinnamoyl-CoA reductase activity	3.61E-03
31	GO:0016757: transferase activity, transferring glycosyl groups	3.87E-03
32	GO:0043565: sequence-specific DNA binding	3.89E-03
33	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.19E-03
34	GO:0004564: beta-fructofuranosidase activity	4.19E-03
35	GO:0030247: polysaccharide binding	4.19E-03
36	GO:0008271: secondary active sulfate transmembrane transporter activity	4.79E-03
37	GO:0004575: sucrose alpha-glucosidase activity	6.09E-03
38	GO:0004805: trehalose-phosphatase activity	6.78E-03
39	GO:0004860: protein kinase inhibitor activity	7.50E-03
40	GO:0046982: protein heterodimerization activity	8.11E-03
41	GO:0015116: sulfate transmembrane transporter activity	8.25E-03
42	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.82E-03
43	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.15E-02
44	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.15E-02
45	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.15E-02
46	GO:0003714: transcription corepressor activity	1.24E-02
47	GO:0008134: transcription factor binding	1.24E-02
48	GO:0042803: protein homodimerization activity	1.46E-02
49	GO:0004871: signal transducer activity	1.46E-02
50	GO:0009055: electron carrier activity	1.96E-02
51	GO:0019901: protein kinase binding	2.23E-02
52	GO:0004674: protein serine/threonine kinase activity	2.30E-02
53	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.56E-02
54	GO:0051015: actin filament binding	2.56E-02
55	GO:0016791: phosphatase activity	2.68E-02
56	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.80E-02
57	GO:0005200: structural constituent of cytoskeleton	2.80E-02
58	GO:0005515: protein binding	2.94E-02
59	GO:0015250: water channel activity	3.04E-02
60	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.93E-02
61	GO:0003993: acid phosphatase activity	4.48E-02
62	GO:0004842: ubiquitin-protein transferase activity	4.59E-02
63	GO:0004672: protein kinase activity	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0031225: anchored component of membrane	1.92E-08
2	GO:0046658: anchored component of plasma membrane	2.46E-06
3	GO:0009505: plant-type cell wall	1.49E-05
4	GO:0009506: plasmodesma	2.75E-04
5	GO:0005794: Golgi apparatus	3.67E-04
6	GO:0005886: plasma membrane	4.74E-04
7	GO:0042406: extrinsic component of endoplasmic reticulum membrane	8.52E-04
8	GO:0005775: vacuolar lumen	1.21E-03
9	GO:0000139: Golgi membrane	1.44E-03
10	GO:0016021: integral component of membrane	3.41E-03
11	GO:0005618: cell wall	5.54E-03
12	GO:0000786: nucleosome	5.61E-03
13	GO:0048471: perinuclear region of cytoplasm	7.50E-03
14	GO:0005576: extracellular region	1.14E-02
15	GO:0005802: trans-Golgi network	2.03E-02
16	GO:0005773: vacuole	2.68E-02
17	GO:0032580: Golgi cisterna membrane	2.68E-02
18	GO:0005615: extracellular space	2.83E-02
19	GO:0030529: intracellular ribonucleoprotein complex	3.04E-02
20	GO:0048046: apoplast	3.15E-02
21	GO:0000325: plant-type vacuole	4.07E-02
22	GO:0031902: late endosome membrane	4.90E-02