Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G47440

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015822: ornithine transport0.00E+00
2GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
3GO:0090393: sepal giant cell development0.00E+00
4GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
5GO:0010583: response to cyclopentenone5.05E-07
6GO:0080167: response to karrikin8.36E-06
7GO:0000271: polysaccharide biosynthetic process1.65E-04
8GO:0009741: response to brassinosteroid1.84E-04
9GO:0045489: pectin biosynthetic process1.84E-04
10GO:0071555: cell wall organization1.91E-04
11GO:0033481: galacturonate biosynthetic process2.36E-04
12GO:0048438: floral whorl development2.36E-04
13GO:0000066: mitochondrial ornithine transport2.36E-04
14GO:0050691: regulation of defense response to virus by host2.36E-04
15GO:0071370: cellular response to gibberellin stimulus2.36E-04
16GO:0006723: cuticle hydrocarbon biosynthetic process2.36E-04
17GO:0010411: xyloglucan metabolic process4.98E-04
18GO:0010200: response to chitin5.05E-04
19GO:0000038: very long-chain fatty acid metabolic process5.11E-04
20GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.24E-04
21GO:0007154: cell communication5.24E-04
22GO:0071497: cellular response to freezing5.24E-04
23GO:0010220: positive regulation of vernalization response5.24E-04
24GO:0030036: actin cytoskeleton organization6.63E-04
25GO:0019419: sulfate reduction8.52E-04
26GO:0043447: alkane biosynthetic process8.52E-04
27GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway8.52E-04
28GO:0009751: response to salicylic acid9.22E-04
29GO:0042546: cell wall biogenesis1.10E-03
30GO:0032877: positive regulation of DNA endoreduplication1.21E-03
31GO:1902358: sulfate transmembrane transport1.21E-03
32GO:0051016: barbed-end actin filament capping1.21E-03
33GO:0031347: regulation of defense response1.33E-03
34GO:2000022: regulation of jasmonic acid mediated signaling pathway1.35E-03
35GO:0019722: calcium-mediated signaling1.59E-03
36GO:0046345: abscisic acid catabolic process1.62E-03
37GO:0006749: glutathione metabolic process1.62E-03
38GO:0042335: cuticle development1.86E-03
39GO:2000762: regulation of phenylpropanoid metabolic process2.07E-03
40GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.47E-03
41GO:0071554: cell wall organization or biogenesis2.47E-03
42GO:0000060: protein import into nucleus, translocation2.55E-03
43GO:0060918: auxin transport2.55E-03
44GO:1900425: negative regulation of defense response to bacterium2.55E-03
45GO:0009828: plant-type cell wall loosening2.99E-03
46GO:0009554: megasporogenesis3.06E-03
47GO:0010555: response to mannitol3.06E-03
48GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity3.06E-03
49GO:0010077: maintenance of inflorescence meristem identity3.06E-03
50GO:2000067: regulation of root morphogenesis3.06E-03
51GO:0045926: negative regulation of growth3.06E-03
52GO:0010076: maintenance of floral meristem identity3.06E-03
53GO:0030154: cell differentiation3.08E-03
54GO:0007267: cell-cell signaling3.17E-03
55GO:0009733: response to auxin3.27E-03
56GO:0050829: defense response to Gram-negative bacterium3.61E-03
57GO:0051510: regulation of unidimensional cell growth3.61E-03
58GO:0045010: actin nucleation4.19E-03
59GO:0052543: callose deposition in cell wall4.19E-03
60GO:0008610: lipid biosynthetic process4.19E-03
61GO:0006402: mRNA catabolic process4.19E-03
62GO:0009753: response to jasmonic acid4.66E-03
63GO:2000031: regulation of salicylic acid mediated signaling pathway4.79E-03
64GO:0010099: regulation of photomorphogenesis4.79E-03
65GO:0022900: electron transport chain4.79E-03
66GO:0007186: G-protein coupled receptor signaling pathway4.79E-03
67GO:0009813: flavonoid biosynthetic process4.87E-03
68GO:0000902: cell morphogenesis5.43E-03
69GO:0051865: protein autoubiquitination5.43E-03
70GO:0009739: response to gibberellin5.49E-03
71GO:0016051: carbohydrate biosynthetic process5.87E-03
72GO:0009638: phototropism6.09E-03
73GO:0006357: regulation of transcription from RNA polymerase II promoter6.42E-03
74GO:0043069: negative regulation of programmed cell death6.78E-03
75GO:0000103: sulfate assimilation6.78E-03
76GO:0009750: response to fructose7.50E-03
77GO:1903507: negative regulation of nucleic acid-templated transcription7.50E-03
78GO:0000272: polysaccharide catabolic process7.50E-03
79GO:0009826: unidimensional cell growth7.91E-03
80GO:0016925: protein sumoylation8.25E-03
81GO:0016024: CDP-diacylglycerol biosynthetic process8.25E-03
82GO:0010582: floral meristem determinacy8.25E-03
83GO:2000028: regulation of photoperiodism, flowering9.02E-03
84GO:0018107: peptidyl-threonine phosphorylation9.02E-03
85GO:0010540: basipetal auxin transport9.82E-03
86GO:0034605: cellular response to heat9.82E-03
87GO:0010143: cutin biosynthetic process9.82E-03
88GO:0002237: response to molecule of bacterial origin9.82E-03
89GO:0009723: response to ethylene1.00E-02
90GO:0009585: red, far-red light phototransduction1.02E-02
91GO:0009969: xyloglucan biosynthetic process1.06E-02
92GO:0009225: nucleotide-sugar metabolic process1.06E-02
93GO:0005985: sucrose metabolic process1.06E-02
94GO:0006833: water transport1.15E-02
95GO:0010025: wax biosynthetic process1.15E-02
96GO:0005992: trehalose biosynthetic process1.24E-02
97GO:0019344: cysteine biosynthetic process1.24E-02
98GO:0019953: sexual reproduction1.32E-02
99GO:0010017: red or far-red light signaling pathway1.51E-02
100GO:0009742: brassinosteroid mediated signaling pathway1.55E-02
101GO:0009411: response to UV1.61E-02
102GO:0034220: ion transmembrane transport1.91E-02
103GO:0010087: phloem or xylem histogenesis1.91E-02
104GO:0048653: anther development1.91E-02
105GO:0000226: microtubule cytoskeleton organization1.91E-02
106GO:0080022: primary root development1.91E-02
107GO:0010268: brassinosteroid homeostasis2.01E-02
108GO:0009958: positive gravitropism2.01E-02
109GO:0009791: post-embryonic development2.23E-02
110GO:0009749: response to glucose2.23E-02
111GO:0006633: fatty acid biosynthetic process2.30E-02
112GO:0016132: brassinosteroid biosynthetic process2.34E-02
113GO:0040008: regulation of growth2.41E-02
114GO:0007264: small GTPase mediated signal transduction2.45E-02
115GO:0048235: pollen sperm cell differentiation2.45E-02
116GO:0006468: protein phosphorylation2.56E-02
117GO:0016125: sterol metabolic process2.68E-02
118GO:0019760: glucosinolate metabolic process2.68E-02
119GO:0009639: response to red or far red light2.68E-02
120GO:0009734: auxin-activated signaling pathway2.75E-02
121GO:0016126: sterol biosynthetic process3.04E-02
122GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.16E-02
123GO:0048573: photoperiodism, flowering3.41E-02
124GO:0009738: abscisic acid-activated signaling pathway3.52E-02
125GO:0016311: dephosphorylation3.54E-02
126GO:0048767: root hair elongation3.80E-02
127GO:0009407: toxin catabolic process3.93E-02
128GO:0010218: response to far red light3.93E-02
129GO:0007568: aging4.07E-02
130GO:0048527: lateral root development4.07E-02
131GO:0010119: regulation of stomatal movement4.07E-02
132GO:0009860: pollen tube growth4.20E-02
133GO:0009637: response to blue light4.34E-02
134GO:0007049: cell cycle4.35E-02
135GO:0006839: mitochondrial transport4.76E-02
136GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.98E-02
RankGO TermAdjusted P value
1GO:0045430: chalcone isomerase activity3.91E-05
2GO:0044212: transcription regulatory region DNA binding1.91E-04
3GO:0008252: nucleotidase activity2.36E-04
4GO:0080132: fatty acid alpha-hydroxylase activity2.36E-04
5GO:0003838: sterol 24-C-methyltransferase activity2.36E-04
6GO:0033741: adenylyl-sulfate reductase (glutathione) activity5.24E-04
7GO:0000064: L-ornithine transmembrane transporter activity5.24E-04
8GO:0048531: beta-1,3-galactosyltransferase activity5.24E-04
9GO:0009973: adenylyl-sulfate reductase activity5.24E-04
10GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity5.24E-04
11GO:0001664: G-protein coupled receptor binding8.52E-04
12GO:0031683: G-protein beta/gamma-subunit complex binding8.52E-04
13GO:0010295: (+)-abscisic acid 8'-hydroxylase activity8.52E-04
14GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.12E-03
15GO:0001872: (1->3)-beta-D-glucan binding1.21E-03
16GO:0033843: xyloglucan 6-xylosyltransferase activity1.21E-03
17GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.35E-03
18GO:0050378: UDP-glucuronate 4-epimerase activity1.62E-03
19GO:0031386: protein tag2.07E-03
20GO:0016762: xyloglucan:xyloglucosyl transferase activity2.47E-03
21GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.55E-03
22GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.55E-03
23GO:0035252: UDP-xylosyltransferase activity2.55E-03
24GO:0016759: cellulose synthase activity2.99E-03
25GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.05E-03
26GO:0016758: transferase activity, transferring hexosyl groups3.06E-03
27GO:0016161: beta-amylase activity3.06E-03
28GO:0016413: O-acetyltransferase activity3.36E-03
29GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.59E-03
30GO:0016621: cinnamoyl-CoA reductase activity3.61E-03
31GO:0016757: transferase activity, transferring glycosyl groups3.87E-03
32GO:0043565: sequence-specific DNA binding3.89E-03
33GO:0016798: hydrolase activity, acting on glycosyl bonds4.19E-03
34GO:0004564: beta-fructofuranosidase activity4.19E-03
35GO:0030247: polysaccharide binding4.19E-03
36GO:0008271: secondary active sulfate transmembrane transporter activity4.79E-03
37GO:0004575: sucrose alpha-glucosidase activity6.09E-03
38GO:0004805: trehalose-phosphatase activity6.78E-03
39GO:0004860: protein kinase inhibitor activity7.50E-03
40GO:0046982: protein heterodimerization activity8.11E-03
41GO:0015116: sulfate transmembrane transporter activity8.25E-03
42GO:0042973: glucan endo-1,3-beta-D-glucosidase activity9.82E-03
43GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.15E-02
44GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.15E-02
45GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.15E-02
46GO:0003714: transcription corepressor activity1.24E-02
47GO:0008134: transcription factor binding1.24E-02
48GO:0042803: protein homodimerization activity1.46E-02
49GO:0004871: signal transducer activity1.46E-02
50GO:0009055: electron carrier activity1.96E-02
51GO:0019901: protein kinase binding2.23E-02
52GO:0004674: protein serine/threonine kinase activity2.30E-02
53GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.56E-02
54GO:0051015: actin filament binding2.56E-02
55GO:0016791: phosphatase activity2.68E-02
56GO:0016722: oxidoreductase activity, oxidizing metal ions2.80E-02
57GO:0005200: structural constituent of cytoskeleton2.80E-02
58GO:0005515: protein binding2.94E-02
59GO:0015250: water channel activity3.04E-02
60GO:0004693: cyclin-dependent protein serine/threonine kinase activity3.93E-02
61GO:0003993: acid phosphatase activity4.48E-02
62GO:0004842: ubiquitin-protein transferase activity4.59E-02
63GO:0004672: protein kinase activity5.00E-02
RankGO TermAdjusted P value
1GO:0031225: anchored component of membrane1.92E-08
2GO:0046658: anchored component of plasma membrane2.46E-06
3GO:0009505: plant-type cell wall1.49E-05
4GO:0009506: plasmodesma2.75E-04
5GO:0005794: Golgi apparatus3.67E-04
6GO:0005886: plasma membrane4.74E-04
7GO:0042406: extrinsic component of endoplasmic reticulum membrane8.52E-04
8GO:0005775: vacuolar lumen1.21E-03
9GO:0000139: Golgi membrane1.44E-03
10GO:0016021: integral component of membrane3.41E-03
11GO:0005618: cell wall5.54E-03
12GO:0000786: nucleosome5.61E-03
13GO:0048471: perinuclear region of cytoplasm7.50E-03
14GO:0005576: extracellular region1.14E-02
15GO:0005802: trans-Golgi network2.03E-02
16GO:0005773: vacuole2.68E-02
17GO:0032580: Golgi cisterna membrane2.68E-02
18GO:0005615: extracellular space2.83E-02
19GO:0030529: intracellular ribonucleoprotein complex3.04E-02
20GO:0048046: apoplast3.15E-02
21GO:0000325: plant-type vacuole4.07E-02
22GO:0031902: late endosome membrane4.90E-02
Gene type



Gene DE type