co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G46930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:0015739: sialic acid transport	0.00E+00
3	GO:0033494: ferulate metabolic process	0.00E+00
4	GO:0006066: alcohol metabolic process	0.00E+00
5	GO:0042335: cuticle development	1.06E-07
6	GO:0000038: very long-chain fatty acid metabolic process	1.44E-05
7	GO:0080170: hydrogen peroxide transmembrane transport	1.66E-05
8	GO:0010025: wax biosynthetic process	4.03E-05
9	GO:0006633: fatty acid biosynthetic process	7.09E-05
10	GO:0009416: response to light stimulus	7.90E-05
11	GO:0006869: lipid transport	8.90E-05
12	GO:0046520: sphingoid biosynthetic process	2.04E-04
13	GO:0030974: thiamine pyrophosphate transport	2.04E-04
14	GO:0071277: cellular response to calcium ion	2.04E-04
15	GO:0033481: galacturonate biosynthetic process	2.04E-04
16	GO:0042371: vitamin K biosynthetic process	2.04E-04
17	GO:0051180: vitamin transport	2.04E-04
18	GO:0006810: transport	3.02E-04
19	GO:0010205: photoinhibition	3.06E-04
20	GO:0009773: photosynthetic electron transport in photosystem I	4.16E-04
21	GO:0015893: drug transport	4.57E-04
22	GO:0001736: establishment of planar polarity	4.57E-04
23	GO:0010024: phytochromobilin biosynthetic process	4.57E-04
24	GO:0043255: regulation of carbohydrate biosynthetic process	4.57E-04
25	GO:0010115: regulation of abscisic acid biosynthetic process	4.57E-04
26	GO:0010143: cutin biosynthetic process	6.10E-04
27	GO:0016042: lipid catabolic process	6.21E-04
28	GO:0007623: circadian rhythm	6.30E-04
29	GO:0010167: response to nitrate	6.82E-04
30	GO:0015840: urea transport	7.44E-04
31	GO:0015714: phosphoenolpyruvate transport	7.44E-04
32	GO:0006788: heme oxidation	7.44E-04
33	GO:0006636: unsaturated fatty acid biosynthetic process	7.58E-04
34	GO:0006833: water transport	7.58E-04
35	GO:0009926: auxin polar transport	8.10E-04
36	GO:0016998: cell wall macromolecule catabolic process	1.01E-03
37	GO:0006168: adenine salvage	1.06E-03
38	GO:0006166: purine ribonucleoside salvage	1.06E-03
39	GO:0009650: UV protection	1.06E-03
40	GO:0006857: oligopeptide transport	1.27E-03
41	GO:0015713: phosphoglycerate transport	1.41E-03
42	GO:0006183: GTP biosynthetic process	1.41E-03
43	GO:0045727: positive regulation of translation	1.41E-03
44	GO:0030104: water homeostasis	1.41E-03
45	GO:0031122: cytoplasmic microtubule organization	1.41E-03
46	GO:0034220: ion transmembrane transport	1.51E-03
47	GO:0009735: response to cytokinin	1.52E-03
48	GO:0071555: cell wall organization	1.71E-03
49	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.77E-03
50	GO:0016120: carotene biosynthetic process	1.80E-03
51	GO:0006564: L-serine biosynthetic process	1.80E-03
52	GO:0010236: plastoquinone biosynthetic process	1.80E-03
53	GO:0044209: AMP salvage	1.80E-03
54	GO:0030308: negative regulation of cell growth	1.80E-03
55	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.21E-03
56	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.21E-03
57	GO:0010337: regulation of salicylic acid metabolic process	2.21E-03
58	GO:0006596: polyamine biosynthetic process	2.21E-03
59	GO:0035435: phosphate ion transmembrane transport	2.21E-03
60	GO:0006561: proline biosynthetic process	2.21E-03
61	GO:0048759: xylem vessel member cell differentiation	2.21E-03
62	GO:0010405: arabinogalactan protein metabolic process	2.21E-03
63	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.21E-03
64	GO:0009913: epidermal cell differentiation	2.21E-03
65	GO:0006694: steroid biosynthetic process	2.66E-03
66	GO:0010189: vitamin E biosynthetic process	2.66E-03
67	GO:0055114: oxidation-reduction process	2.68E-03
68	GO:0016126: sterol biosynthetic process	2.89E-03
69	GO:1900057: positive regulation of leaf senescence	3.13E-03
70	GO:0050829: defense response to Gram-negative bacterium	3.13E-03
71	GO:0010444: guard mother cell differentiation	3.13E-03
72	GO:0009395: phospholipid catabolic process	3.13E-03
73	GO:0030497: fatty acid elongation	3.13E-03
74	GO:0010411: xyloglucan metabolic process	3.40E-03
75	GO:0042255: ribosome assembly	3.63E-03
76	GO:0046620: regulation of organ growth	3.63E-03
77	GO:0009704: de-etiolation	3.63E-03
78	GO:0031540: regulation of anthocyanin biosynthetic process	3.63E-03
79	GO:0055075: potassium ion homeostasis	3.63E-03
80	GO:0016559: peroxisome fission	3.63E-03
81	GO:0008610: lipid biosynthetic process	3.63E-03
82	GO:0030091: protein repair	3.63E-03
83	GO:0018298: protein-chromophore linkage	3.76E-03
84	GO:0032544: plastid translation	4.15E-03
85	GO:0009808: lignin metabolic process	4.15E-03
86	GO:0090333: regulation of stomatal closure	4.70E-03
87	GO:0015780: nucleotide-sugar transport	4.70E-03
88	GO:0009637: response to blue light	4.76E-03
89	GO:0009638: phototropism	5.27E-03
90	GO:0019538: protein metabolic process	5.86E-03
91	GO:0006032: chitin catabolic process	5.86E-03
92	GO:0009688: abscisic acid biosynthetic process	5.86E-03
93	GO:0048829: root cap development	5.86E-03
94	GO:0010192: mucilage biosynthetic process	5.86E-03
95	GO:0009414: response to water deprivation	5.88E-03
96	GO:0009826: unidimensional cell growth	6.05E-03
97	GO:0042546: cell wall biogenesis	6.38E-03
98	GO:0009750: response to fructose	6.48E-03
99	GO:0048765: root hair cell differentiation	6.48E-03
100	GO:2000652: regulation of secondary cell wall biogenesis	6.48E-03
101	GO:0008643: carbohydrate transport	6.63E-03
102	GO:0015706: nitrate transport	7.12E-03
103	GO:0016024: CDP-diacylglycerol biosynthetic process	7.12E-03
104	GO:0007165: signal transduction	7.25E-03
105	GO:0010628: positive regulation of gene expression	7.78E-03
106	GO:0006006: glucose metabolic process	7.78E-03
107	GO:0010229: inflorescence development	7.78E-03
108	GO:0009718: anthocyanin-containing compound biosynthetic process	7.78E-03
109	GO:0009725: response to hormone	7.78E-03
110	GO:0009809: lignin biosynthetic process	8.27E-03
111	GO:0019253: reductive pentose-phosphate cycle	8.47E-03
112	GO:0048467: gynoecium development	8.47E-03
113	GO:0010020: chloroplast fission	8.47E-03
114	GO:0071732: cellular response to nitric oxide	9.17E-03
115	GO:0010030: positive regulation of seed germination	9.17E-03
116	GO:0010053: root epidermal cell differentiation	9.17E-03
117	GO:0009225: nucleotide-sugar metabolic process	9.17E-03
118	GO:0009825: multidimensional cell growth	9.17E-03
119	GO:0006096: glycolytic process	9.79E-03
120	GO:0015979: photosynthesis	9.89E-03
121	GO:0042023: DNA endoreduplication	9.90E-03
122	GO:0019762: glucosinolate catabolic process	9.90E-03
123	GO:0009409: response to cold	1.04E-02
124	GO:0006487: protein N-linked glycosylation	1.06E-02
125	GO:0007017: microtubule-based process	1.14E-02
126	GO:0009768: photosynthesis, light harvesting in photosystem I	1.14E-02
127	GO:0003333: amino acid transmembrane transport	1.22E-02
128	GO:0031408: oxylipin biosynthetic process	1.22E-02
129	GO:0005975: carbohydrate metabolic process	1.27E-02
130	GO:0030245: cellulose catabolic process	1.30E-02
131	GO:0009411: response to UV	1.38E-02
132	GO:0071369: cellular response to ethylene stimulus	1.38E-02
133	GO:0019722: calcium-mediated signaling	1.47E-02
134	GO:0042127: regulation of cell proliferation	1.47E-02
135	GO:0010089: xylem development	1.47E-02
136	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.55E-02
137	GO:0010087: phloem or xylem histogenesis	1.64E-02
138	GO:0042631: cellular response to water deprivation	1.64E-02
139	GO:0010182: sugar mediated signaling pathway	1.73E-02
140	GO:0009958: positive gravitropism	1.73E-02
141	GO:0009651: response to salt stress	1.82E-02
142	GO:0016132: brassinosteroid biosynthetic process	2.01E-02
143	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.01E-02
144	GO:0010150: leaf senescence	2.05E-02
145	GO:0032502: developmental process	2.11E-02
146	GO:0071281: cellular response to iron ion	2.21E-02
147	GO:0010252: auxin homeostasis	2.30E-02
148	GO:0007267: cell-cell signaling	2.41E-02
149	GO:0009627: systemic acquired resistance	2.83E-02
150	GO:0042128: nitrate assimilation	2.83E-02
151	GO:0048573: photoperiodism, flowering	2.94E-02
152	GO:0015995: chlorophyll biosynthetic process	2.94E-02
153	GO:0030244: cellulose biosynthetic process	3.16E-02
154	GO:0009658: chloroplast organization	3.17E-02
155	GO:0010311: lateral root formation	3.27E-02
156	GO:0000160: phosphorelay signal transduction system	3.27E-02
157	GO:0045893: positive regulation of transcription, DNA-templated	3.35E-02
158	GO:0010218: response to far red light	3.38E-02
159	GO:0009834: plant-type secondary cell wall biogenesis	3.38E-02
160	GO:0006865: amino acid transport	3.62E-02
161	GO:0055085: transmembrane transport	3.79E-02
162	GO:0006839: mitochondrial transport	4.10E-02
163	GO:0009640: photomorphogenesis	4.47E-02
164	GO:0010114: response to red light	4.47E-02
165	GO:0009744: response to sucrose	4.47E-02
166	GO:0008283: cell proliferation	4.47E-02
167	GO:0009644: response to high light intensity	4.73E-02
168	GO:0006855: drug transmembrane transport	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
2	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
3	GO:0015136: sialic acid transmembrane transporter activity	0.00E+00
4	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
5	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
6	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
7	GO:0050614: delta24-sterol reductase activity	0.00E+00
8	GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity	0.00E+00
9	GO:0046577: long-chain-alcohol oxidase activity	0.00E+00
10	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
11	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
12	GO:0010487: thermospermine synthase activity	0.00E+00
13	GO:0016788: hydrolase activity, acting on ester bonds	2.68E-05
14	GO:0004506: squalene monooxygenase activity	3.05E-05
15	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.03E-05
16	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.03E-05
17	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.03E-05
18	GO:0008568: microtubule-severing ATPase activity	2.04E-04
19	GO:0045485: omega-6 fatty acid desaturase activity	2.04E-04
20	GO:0015200: methylammonium transmembrane transporter activity	2.04E-04
21	GO:0016768: spermine synthase activity	2.04E-04
22	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	2.04E-04
23	GO:0000170: sphingosine hydroxylase activity	2.04E-04
24	GO:0030794: (S)-coclaurine-N-methyltransferase activity	2.04E-04
25	GO:0090422: thiamine pyrophosphate transporter activity	2.04E-04
26	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	2.04E-04
27	GO:0015250: water channel activity	3.07E-04
28	GO:0052689: carboxylic ester hydrolase activity	3.89E-04
29	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	4.57E-04
30	GO:0004617: phosphoglycerate dehydrogenase activity	4.57E-04
31	GO:0003938: IMP dehydrogenase activity	4.57E-04
32	GO:0042284: sphingolipid delta-4 desaturase activity	4.57E-04
33	GO:0004565: beta-galactosidase activity	5.42E-04
34	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	7.44E-04
35	GO:0050734: hydroxycinnamoyltransferase activity	7.44E-04
36	GO:0015293: symporter activity	9.35E-04
37	GO:0003999: adenine phosphoribosyltransferase activity	1.06E-03
38	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.06E-03
39	GO:0001872: (1->3)-beta-D-glucan binding	1.06E-03
40	GO:0008289: lipid binding	1.16E-03
41	GO:0050378: UDP-glucuronate 4-epimerase activity	1.41E-03
42	GO:0004392: heme oxygenase (decyclizing) activity	1.41E-03
43	GO:0015204: urea transmembrane transporter activity	1.41E-03
44	GO:0015120: phosphoglycerate transmembrane transporter activity	1.41E-03
45	GO:0010011: auxin binding	1.41E-03
46	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.41E-03
47	GO:0010328: auxin influx transmembrane transporter activity	1.41E-03
48	GO:0050660: flavin adenine dinucleotide binding	1.51E-03
49	GO:0009922: fatty acid elongase activity	1.80E-03
50	GO:0016746: transferase activity, transferring acyl groups	1.89E-03
51	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.01E-03
52	GO:0005215: transporter activity	2.09E-03
53	GO:0035673: oligopeptide transmembrane transporter activity	2.21E-03
54	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.21E-03
55	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.21E-03
56	GO:0008519: ammonium transmembrane transporter activity	2.21E-03
57	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.21E-03
58	GO:0004629: phospholipase C activity	2.21E-03
59	GO:0004871: signal transducer activity	2.37E-03
60	GO:0004435: phosphatidylinositol phospholipase C activity	2.66E-03
61	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.66E-03
62	GO:0051753: mannan synthase activity	2.66E-03
63	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.90E-03
64	GO:0016168: chlorophyll binding	3.05E-03
65	GO:0005338: nucleotide-sugar transmembrane transporter activity	3.13E-03
66	GO:0030247: polysaccharide binding	3.40E-03
67	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.40E-03
68	GO:0052747: sinapyl alcohol dehydrogenase activity	3.63E-03
69	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.15E-03
70	GO:0015112: nitrate transmembrane transporter activity	5.27E-03
71	GO:0030234: enzyme regulator activity	5.86E-03
72	GO:0004568: chitinase activity	5.86E-03
73	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.12E-03
74	GO:0015198: oligopeptide transporter activity	7.12E-03
75	GO:0003824: catalytic activity	7.21E-03
76	GO:0051287: NAD binding	7.43E-03
77	GO:0008081: phosphoric diester hydrolase activity	7.78E-03
78	GO:0004022: alcohol dehydrogenase (NAD) activity	7.78E-03
79	GO:0015114: phosphate ion transmembrane transporter activity	7.78E-03
80	GO:0008266: poly(U) RNA binding	8.47E-03
81	GO:0003690: double-stranded DNA binding	8.56E-03
82	GO:0008146: sulfotransferase activity	9.17E-03
83	GO:0031409: pigment binding	9.90E-03
84	GO:0005528: FK506 binding	1.06E-02
85	GO:0022857: transmembrane transporter activity	1.11E-02
86	GO:0008810: cellulase activity	1.38E-02
87	GO:0022891: substrate-specific transmembrane transporter activity	1.38E-02
88	GO:0030570: pectate lyase activity	1.38E-02
89	GO:0003727: single-stranded RNA binding	1.47E-02
90	GO:0008514: organic anion transmembrane transporter activity	1.47E-02
91	GO:0019843: rRNA binding	1.48E-02
92	GO:0050662: coenzyme binding	1.82E-02
93	GO:0004872: receptor activity	1.92E-02
94	GO:0015297: antiporter activity	1.95E-02
95	GO:0000156: phosphorelay response regulator activity	2.21E-02
96	GO:0016791: phosphatase activity	2.30E-02
97	GO:0005200: structural constituent of cytoskeleton	2.41E-02
98	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.41E-02
99	GO:0016597: amino acid binding	2.51E-02
100	GO:0042802: identical protein binding	2.60E-02
101	GO:0008375: acetylglucosaminyltransferase activity	2.83E-02
102	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.05E-02
103	GO:0008168: methyltransferase activity	3.05E-02
104	GO:0016491: oxidoreductase activity	3.15E-02
105	GO:0015238: drug transmembrane transporter activity	3.27E-02
106	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.38E-02
107	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.50E-02
108	GO:0003993: acid phosphatase activity	3.86E-02
109	GO:0030246: carbohydrate binding	4.07E-02
110	GO:0050661: NADP binding	4.10E-02
111	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0010240: plastid pyruvate dehydrogenase complex	0.00E+00
2	GO:0048046: apoplast	9.70E-09
3	GO:0005886: plasma membrane	7.58E-07
4	GO:0042807: central vacuole	1.33E-04
5	GO:0043674: columella	2.04E-04
6	GO:0016021: integral component of membrane	2.29E-04
7	GO:0031225: anchored component of membrane	2.51E-04
8	GO:0005576: extracellular region	6.47E-04
9	GO:0046658: anchored component of plasma membrane	9.61E-04
10	GO:0015630: microtubule cytoskeleton	1.06E-03
11	GO:0009507: chloroplast	1.19E-03
12	GO:0009941: chloroplast envelope	1.81E-03
13	GO:0005783: endoplasmic reticulum	1.91E-03
14	GO:0009505: plant-type cell wall	2.67E-03
15	GO:0009535: chloroplast thylakoid membrane	2.72E-03
16	GO:0009986: cell surface	3.13E-03
17	GO:0005618: cell wall	3.35E-03
18	GO:0000326: protein storage vacuole	4.15E-03
19	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.70E-03
20	GO:0008180: COP9 signalosome	4.70E-03
21	GO:0016020: membrane	4.76E-03
22	GO:0005887: integral component of plasma membrane	4.84E-03
23	GO:0005794: Golgi apparatus	4.94E-03
24	GO:0031969: chloroplast membrane	8.35E-03
25	GO:0030076: light-harvesting complex	9.17E-03
26	GO:0009579: thylakoid	9.53E-03
27	GO:0009534: chloroplast thylakoid	9.68E-03
28	GO:0009706: chloroplast inner membrane	1.18E-02
29	GO:0010287: plastoglobule	1.40E-02
30	GO:0009543: chloroplast thylakoid lumen	1.48E-02
31	GO:0009522: photosystem I	1.82E-02
32	GO:0009523: photosystem II	1.92E-02
33	GO:0009705: plant-type vacuole membrane	2.05E-02
34	GO:0032580: Golgi cisterna membrane	2.30E-02
35	GO:0019005: SCF ubiquitin ligase complex	3.16E-02
36	GO:0009707: chloroplast outer membrane	3.16E-02
37	GO:0005789: endoplasmic reticulum membrane	3.91E-02
38	GO:0031977: thylakoid lumen	4.22E-02
39	GO:0005773: vacuole	4.25E-02