Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G46710

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045014: negative regulation of transcription by glucose0.00E+00
2GO:1901918: negative regulation of exoribonuclease activity0.00E+00
3GO:0033231: carbohydrate export0.00E+00
4GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
5GO:0007172: signal complex assembly0.00E+00
6GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
7GO:0090627: plant epidermal cell differentiation0.00E+00
8GO:0015755: fructose transport7.23E-05
9GO:0000476: maturation of 4.5S rRNA7.23E-05
10GO:0000967: rRNA 5'-end processing7.23E-05
11GO:0043266: regulation of potassium ion transport7.23E-05
12GO:2000021: regulation of ion homeostasis7.23E-05
13GO:0043007: maintenance of rDNA7.23E-05
14GO:1902334: fructose export from vacuole to cytoplasm7.23E-05
15GO:0009734: auxin-activated signaling pathway7.89E-05
16GO:0009733: response to auxin1.06E-04
17GO:0009926: auxin polar transport1.24E-04
18GO:0006898: receptor-mediated endocytosis1.74E-04
19GO:0010541: acropetal auxin transport1.74E-04
20GO:0034470: ncRNA processing1.74E-04
21GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.94E-04
22GO:0010160: formation of animal organ boundary2.93E-04
23GO:0016045: detection of bacterium2.93E-04
24GO:0010359: regulation of anion channel activity2.93E-04
25GO:0048443: stamen development3.31E-04
26GO:0010305: leaf vascular tissue pattern formation4.18E-04
27GO:0080170: hydrogen peroxide transmembrane transport4.23E-04
28GO:0043481: anthocyanin accumulation in tissues in response to UV light4.23E-04
29GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity4.23E-04
30GO:0051513: regulation of monopolar cell growth4.23E-04
31GO:0006468: protein phosphorylation5.05E-04
32GO:0030104: water homeostasis5.65E-04
33GO:0015995: chlorophyll biosynthetic process8.59E-04
34GO:0009228: thiamine biosynthetic process8.73E-04
35GO:0009913: epidermal cell differentiation8.73E-04
36GO:0060918: auxin transport8.73E-04
37GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway8.73E-04
38GO:0009942: longitudinal axis specification1.04E-03
39GO:0050829: defense response to Gram-negative bacterium1.21E-03
40GO:0046620: regulation of organ growth1.40E-03
41GO:0009657: plastid organization1.59E-03
42GO:0007389: pattern specification process1.59E-03
43GO:0010206: photosystem II repair1.80E-03
44GO:0048589: developmental growth1.80E-03
45GO:0009638: phototropism2.01E-03
46GO:0006995: cellular response to nitrogen starvation2.23E-03
47GO:0052544: defense response by callose deposition in cell wall2.46E-03
48GO:1903507: negative regulation of nucleic acid-templated transcription2.46E-03
49GO:0009750: response to fructose2.46E-03
50GO:0046856: phosphatidylinositol dephosphorylation2.46E-03
51GO:0010152: pollen maturation2.70E-03
52GO:0008361: regulation of cell size2.70E-03
53GO:0010588: cotyledon vascular tissue pattern formation2.94E-03
54GO:0009785: blue light signaling pathway2.94E-03
55GO:0010207: photosystem II assembly3.19E-03
56GO:0010540: basipetal auxin transport3.19E-03
57GO:0009934: regulation of meristem structural organization3.19E-03
58GO:0010030: positive regulation of seed germination3.44E-03
59GO:0006636: unsaturated fatty acid biosynthetic process3.71E-03
60GO:2000377: regulation of reactive oxygen species metabolic process3.98E-03
61GO:0007017: microtubule-based process4.26E-03
62GO:0016114: terpenoid biosynthetic process4.54E-03
63GO:0051260: protein homooligomerization4.54E-03
64GO:0048511: rhythmic process4.54E-03
65GO:0040008: regulation of growth4.69E-03
66GO:2000022: regulation of jasmonic acid mediated signaling pathway4.83E-03
67GO:0007623: circadian rhythm4.91E-03
68GO:0009831: plant-type cell wall modification involved in multidimensional cell growth5.13E-03
69GO:0071369: cellular response to ethylene stimulus5.13E-03
70GO:0007166: cell surface receptor signaling pathway5.61E-03
71GO:0009789: positive regulation of abscisic acid-activated signaling pathway5.74E-03
72GO:0070417: cellular response to cold5.74E-03
73GO:0042631: cellular response to water deprivation6.05E-03
74GO:0080022: primary root development6.05E-03
75GO:0034220: ion transmembrane transport6.05E-03
76GO:0010087: phloem or xylem histogenesis6.05E-03
77GO:0071472: cellular response to salt stress6.38E-03
78GO:0009958: positive gravitropism6.38E-03
79GO:0042752: regulation of circadian rhythm6.70E-03
80GO:0009646: response to absence of light6.70E-03
81GO:0007275: multicellular organism development6.72E-03
82GO:0048825: cotyledon development7.04E-03
83GO:0010583: response to cyclopentenone7.72E-03
84GO:0016032: viral process7.72E-03
85GO:0010252: auxin homeostasis8.43E-03
86GO:0009639: response to red or far red light8.43E-03
87GO:0009828: plant-type cell wall loosening8.43E-03
88GO:0071805: potassium ion transmembrane transport8.79E-03
89GO:0010218: response to far red light1.23E-02
90GO:0009631: cold acclimation1.27E-02
91GO:0048527: lateral root development1.27E-02
92GO:0009637: response to blue light1.36E-02
93GO:0048364: root development1.45E-02
94GO:0009640: photomorphogenesis1.63E-02
95GO:0010114: response to red light1.63E-02
96GO:0031347: regulation of defense response1.86E-02
97GO:0009664: plant-type cell wall organization1.91E-02
98GO:0042538: hyperosmotic salinity response1.91E-02
99GO:0006364: rRNA processing2.01E-02
100GO:0009585: red, far-red light phototransduction2.01E-02
101GO:0006813: potassium ion transport2.01E-02
102GO:0006417: regulation of translation2.16E-02
103GO:0048367: shoot system development2.31E-02
104GO:0009416: response to light stimulus2.48E-02
105GO:0042545: cell wall modification2.53E-02
106GO:0006396: RNA processing2.64E-02
107GO:0055085: transmembrane transport3.14E-02
108GO:0006952: defense response3.17E-02
109GO:0009845: seed germination3.20E-02
110GO:0006633: fatty acid biosynthetic process3.56E-02
111GO:0045490: pectin catabolic process3.81E-02
112GO:0016567: protein ubiquitination4.56E-02
113GO:0042742: defense response to bacterium4.98E-02
RankGO TermAdjusted P value
1GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
2GO:0015284: fructose uniporter activity0.00E+00
3GO:0010329: auxin efflux transmembrane transporter activity1.27E-04
4GO:0005353: fructose transmembrane transporter activity1.74E-04
5GO:0016868: intramolecular transferase activity, phosphotransferases1.74E-04
6GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity1.74E-04
7GO:0004312: fatty acid synthase activity1.74E-04
8GO:0090729: toxin activity2.93E-04
9GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity2.93E-04
10GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.64E-04
11GO:0010011: auxin binding5.65E-04
12GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity8.73E-04
13GO:0016832: aldehyde-lyase activity1.04E-03
14GO:0016301: kinase activity1.10E-03
15GO:0004712: protein serine/threonine/tyrosine kinase activity1.29E-03
16GO:0043621: protein self-association1.63E-03
17GO:0009672: auxin:proton symporter activity2.01E-03
18GO:0004674: protein serine/threonine kinase activity2.29E-03
19GO:0008794: arsenate reductase (glutaredoxin) activity2.46E-03
20GO:0047372: acylglycerol lipase activity2.46E-03
21GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity2.70E-03
22GO:0005515: protein binding2.82E-03
23GO:0031072: heat shock protein binding2.94E-03
24GO:0051119: sugar transmembrane transporter activity3.44E-03
25GO:0003714: transcription corepressor activity3.98E-03
26GO:0015079: potassium ion transmembrane transporter activity4.26E-03
27GO:0004672: protein kinase activity4.32E-03
28GO:0033612: receptor serine/threonine kinase binding4.54E-03
29GO:0003756: protein disulfide isomerase activity5.43E-03
30GO:0003727: single-stranded RNA binding5.43E-03
31GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity8.79E-03
32GO:0005200: structural constituent of cytoskeleton8.79E-03
33GO:0015250: water channel activity9.54E-03
34GO:0004871: signal transducer activity1.18E-02
35GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.27E-02
36GO:0005524: ATP binding1.29E-02
37GO:0009055: electron carrier activity1.50E-02
38GO:0051537: 2 iron, 2 sulfur cluster binding1.72E-02
39GO:0008289: lipid binding1.94E-02
40GO:0003777: microtubule motor activity2.16E-02
41GO:0045330: aspartyl esterase activity2.16E-02
42GO:0004650: polygalacturonase activity2.42E-02
43GO:0030599: pectinesterase activity2.47E-02
44GO:0051082: unfolded protein binding2.58E-02
45GO:0015035: protein disulfide oxidoreductase activity2.64E-02
46GO:0016787: hydrolase activity2.96E-02
47GO:0016829: lyase activity3.20E-02
48GO:0046910: pectinesterase inhibitor activity3.63E-02
49GO:0008017: microtubule binding3.94E-02
50GO:0003743: translation initiation factor activity4.26E-02
51GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.52E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0005886: plasma membrane2.14E-05
3GO:0043674: columella7.23E-05
4GO:0009534: chloroplast thylakoid1.87E-04
5GO:0009507: chloroplast4.91E-04
6GO:0009705: plant-type vacuole membrane6.15E-04
7GO:0009570: chloroplast stroma1.19E-03
8GO:0042807: central vacuole1.21E-03
9GO:0031977: thylakoid lumen1.40E-03
10GO:0045298: tubulin complex1.80E-03
11GO:0055028: cortical microtubule2.23E-03
12GO:0016602: CCAAT-binding factor complex2.94E-03
13GO:0009543: chloroplast thylakoid lumen3.57E-03
14GO:0009941: chloroplast envelope7.40E-03
15GO:0071944: cell periphery8.07E-03
16GO:0009535: chloroplast thylakoid membrane8.18E-03
17GO:0005874: microtubule9.09E-03
18GO:0031969: chloroplast membrane9.41E-03
19GO:0000325: plant-type vacuole1.27E-02
20GO:0009505: plant-type cell wall1.51E-02
21GO:0016020: membrane2.02E-02
22GO:0010008: endosome membrane2.31E-02
23GO:0009706: chloroplast inner membrane2.58E-02
24GO:0010287: plastoglobule2.92E-02
25GO:0009579: thylakoid2.96E-02
26GO:0005623: cell3.09E-02
27GO:0005768: endosome4.49E-02
Gene type



Gene DE type