Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G46240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010378: temperature compensation of the circadian clock0.00E+00
2GO:0010218: response to far red light1.57E-05
3GO:0032958: inositol phosphate biosynthetic process3.50E-05
4GO:0000025: maltose catabolic process3.50E-05
5GO:0030259: lipid glycosylation8.78E-05
6GO:0015914: phospholipid transport8.78E-05
7GO:0051170: nuclear import8.78E-05
8GO:0006598: polyamine catabolic process1.52E-04
9GO:0006020: inositol metabolic process2.25E-04
10GO:0051365: cellular response to potassium ion starvation3.05E-04
11GO:0009765: photosynthesis, light harvesting3.05E-04
12GO:0010600: regulation of auxin biosynthetic process3.05E-04
13GO:0048578: positive regulation of long-day photoperiodism, flowering3.89E-04
14GO:0006656: phosphatidylcholine biosynthetic process3.89E-04
15GO:0031053: primary miRNA processing4.78E-04
16GO:0009637: response to blue light4.85E-04
17GO:0045926: negative regulation of growth5.70E-04
18GO:0009861: jasmonic acid and ethylene-dependent systemic resistance5.70E-04
19GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.70E-04
20GO:0010114: response to red light6.19E-04
21GO:0009645: response to low light intensity stimulus6.66E-04
22GO:0010161: red light signaling pathway6.66E-04
23GO:0009704: de-etiolation7.68E-04
24GO:0010928: regulation of auxin mediated signaling pathway7.68E-04
25GO:0009819: drought recovery7.68E-04
26GO:0009585: red, far-red light phototransduction8.23E-04
27GO:0001510: RNA methylation8.71E-04
28GO:0005982: starch metabolic process1.09E-03
29GO:0009738: abscisic acid-activated signaling pathway1.35E-03
30GO:0005983: starch catabolic process1.44E-03
31GO:0006006: glucose metabolic process1.57E-03
32GO:0007623: circadian rhythm1.95E-03
33GO:0009768: photosynthesis, light harvesting in photosystem I2.26E-03
34GO:0048511: rhythmic process2.41E-03
35GO:0010017: red or far-red light signaling pathway2.56E-03
36GO:0010214: seed coat development2.87E-03
37GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.03E-03
38GO:0000226: microtubule cytoskeleton organization3.20E-03
39GO:0042752: regulation of circadian rhythm3.53E-03
40GO:0080167: response to karrikin3.70E-03
41GO:0010200: response to chitin3.82E-03
42GO:1901657: glycosyl compound metabolic process4.24E-03
43GO:0016125: sterol metabolic process4.42E-03
44GO:0045892: negative regulation of transcription, DNA-templated4.48E-03
45GO:0016126: sterol biosynthetic process4.99E-03
46GO:0009409: response to cold5.01E-03
47GO:0010029: regulation of seed germination5.18E-03
48GO:0005975: carbohydrate metabolic process5.79E-03
49GO:0018298: protein-chromophore linkage5.99E-03
50GO:0009817: defense response to fungus, incompatible interaction5.99E-03
51GO:0000160: phosphorelay signal transduction system6.19E-03
52GO:0009813: flavonoid biosynthetic process6.19E-03
53GO:0016051: carbohydrate biosynthetic process7.05E-03
54GO:0042542: response to hydrogen peroxide8.18E-03
55GO:0009640: photomorphogenesis8.41E-03
56GO:0009644: response to high light intensity8.88E-03
57GO:0009737: response to abscisic acid8.91E-03
58GO:0006812: cation transport9.86E-03
59GO:0000398: mRNA splicing, via spliceosome1.47E-02
60GO:0009651: response to salt stress1.59E-02
61GO:0009845: seed germination1.65E-02
62GO:0006633: fatty acid biosynthetic process1.83E-02
63GO:0009739: response to gibberellin2.12E-02
64GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.12E-02
65GO:0006470: protein dephosphorylation2.15E-02
66GO:0008380: RNA splicing2.22E-02
67GO:0009617: response to bacterium2.22E-02
68GO:0006970: response to osmotic stress2.82E-02
69GO:0015979: photosynthesis3.42E-02
70GO:0032259: methylation3.98E-02
71GO:0006397: mRNA processing4.24E-02
RankGO TermAdjusted P value
1GO:0080082: esculin beta-glucosidase activity0.00E+00
2GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
3GO:0016428: tRNA (cytosine-5-)-methyltransferase activity0.00E+00
4GO:0047668: amygdalin beta-glucosidase activity0.00E+00
5GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
6GO:0004567: beta-mannosidase activity0.00E+00
7GO:0004134: 4-alpha-glucanotransferase activity3.50E-05
8GO:0033857: diphosphoinositol-pentakisphosphate kinase activity3.50E-05
9GO:0016906: sterol 3-beta-glucosyltransferase activity3.50E-05
10GO:0000829: inositol heptakisphosphate kinase activity3.50E-05
11GO:0080079: cellobiose glucosidase activity3.50E-05
12GO:0102203: brassicasterol glucosyltransferase activity3.50E-05
13GO:0102202: soladodine glucosyltransferase activity3.50E-05
14GO:0000828: inositol hexakisphosphate kinase activity3.50E-05
15GO:0046592: polyamine oxidase activity1.52E-04
16GO:0008526: phosphatidylinositol transporter activity3.05E-04
17GO:0045300: acyl-[acyl-carrier-protein] desaturase activity3.89E-04
18GO:2001070: starch binding4.78E-04
19GO:0015562: efflux transmembrane transporter activity4.78E-04
20GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity9.78E-04
21GO:0004565: beta-galactosidase activity1.57E-03
22GO:0008131: primary amine oxidase activity1.70E-03
23GO:0031409: pigment binding1.97E-03
24GO:0008324: cation transmembrane transporter activity2.26E-03
25GO:0008168: methyltransferase activity2.88E-03
26GO:0008536: Ran GTPase binding3.36E-03
27GO:0000156: phosphorelay response regulator activity4.24E-03
28GO:0016168: chlorophyll binding5.18E-03
29GO:0008375: acetylglucosaminyltransferase activity5.38E-03
30GO:0102483: scopolin beta-glucosidase activity5.58E-03
31GO:0008422: beta-glucosidase activity7.49E-03
32GO:0080043: quercetin 3-O-glucosyltransferase activity1.25E-02
33GO:0080044: quercetin 7-O-glucosyltransferase activity1.25E-02
34GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.27E-02
35GO:0046872: metal ion binding1.73E-02
36GO:0044212: transcription regulatory region DNA binding1.96E-02
37GO:0005515: protein binding2.63E-02
38GO:0003682: chromatin binding2.78E-02
39GO:0061630: ubiquitin protein ligase activity3.23E-02
40GO:0004722: protein serine/threonine phosphatase activity3.78E-02
RankGO TermAdjusted P value
1GO:0043036: starch grain8.78E-05
2GO:0010445: nuclear dicing body3.05E-04
3GO:0009501: amyloplast7.68E-04
4GO:0030076: light-harvesting complex1.84E-03
5GO:0009522: photosystem I3.53E-03
6GO:0009523: photosystem II3.70E-03
7GO:0005681: spliceosomal complex1.17E-02
8GO:0016607: nuclear speck1.19E-02
9GO:0010287: plastoglobule1.50E-02
10GO:0005654: nucleoplasm1.53E-02
11GO:0005623: cell1.59E-02
12GO:0005622: intracellular1.72E-02
13GO:0009505: plant-type cell wall2.46E-02
14GO:0009570: chloroplast stroma3.67E-02
Gene type



Gene DE type