co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G46220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
2	GO:0006592: ornithine biosynthetic process	0.00E+00
3	GO:0006105: succinate metabolic process	0.00E+00
4	GO:0032497: detection of lipopolysaccharide	0.00E+00
5	GO:0046459: short-chain fatty acid metabolic process	0.00E+00
6	GO:0019484: beta-alanine catabolic process	0.00E+00
7	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
8	GO:0033587: shikimate biosynthetic process	0.00E+00
9	GO:0070291: N-acylethanolamine metabolic process	0.00E+00
10	GO:0009399: nitrogen fixation	1.76E-05
11	GO:0006635: fatty acid beta-oxidation	1.97E-04
12	GO:0035266: meristem growth	2.11E-04
13	GO:0098710: guanine import across plasma membrane	2.11E-04
14	GO:0009450: gamma-aminobutyric acid catabolic process	2.11E-04
15	GO:0007292: female gamete generation	2.11E-04
16	GO:1990641: response to iron ion starvation	2.11E-04
17	GO:1903409: reactive oxygen species biosynthetic process	2.11E-04
18	GO:0035344: hypoxanthine transport	2.11E-04
19	GO:0009865: pollen tube adhesion	2.11E-04
20	GO:0006540: glutamate decarboxylation to succinate	2.11E-04
21	GO:0098721: uracil import across plasma membrane	2.11E-04
22	GO:0098702: adenine import across plasma membrane	2.11E-04
23	GO:0046167: glycerol-3-phosphate biosynthetic process	2.11E-04
24	GO:0006098: pentose-phosphate shunt	2.70E-04
25	GO:0008202: steroid metabolic process	3.21E-04
26	GO:0048829: root cap development	3.76E-04
27	GO:0046686: response to cadmium ion	3.98E-04
28	GO:0008219: cell death	4.62E-04
29	GO:0010033: response to organic substance	4.71E-04
30	GO:0006641: triglyceride metabolic process	4.71E-04
31	GO:0006101: citrate metabolic process	4.71E-04
32	GO:0051788: response to misfolded protein	4.71E-04
33	GO:0015865: purine nucleotide transport	4.71E-04
34	GO:1900459: positive regulation of brassinosteroid mediated signaling pathway	4.71E-04
35	GO:0030187: melatonin biosynthetic process	4.71E-04
36	GO:1902000: homogentisate catabolic process	4.71E-04
37	GO:0052542: defense response by callose deposition	4.71E-04
38	GO:2000693: positive regulation of seed maturation	4.71E-04
39	GO:0019441: tryptophan catabolic process to kynurenine	4.71E-04
40	GO:0009308: amine metabolic process	4.71E-04
41	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	4.71E-04
42	GO:0045087: innate immune response	6.24E-04
43	GO:0010150: leaf senescence	6.76E-04
44	GO:0030029: actin filament-based process	7.67E-04
45	GO:0009072: aromatic amino acid family metabolic process	7.67E-04
46	GO:0060968: regulation of gene silencing	7.67E-04
47	GO:0006954: inflammatory response	7.67E-04
48	GO:0019563: glycerol catabolic process	7.67E-04
49	GO:0046786: viral replication complex formation and maintenance	7.67E-04
50	GO:0048194: Golgi vesicle budding	1.09E-03
51	GO:0006020: inositol metabolic process	1.09E-03
52	GO:0046902: regulation of mitochondrial membrane permeability	1.09E-03
53	GO:0072334: UDP-galactose transmembrane transport	1.09E-03
54	GO:0006072: glycerol-3-phosphate metabolic process	1.09E-03
55	GO:0015749: monosaccharide transport	1.09E-03
56	GO:0006809: nitric oxide biosynthetic process	1.09E-03
57	GO:0009113: purine nucleobase biosynthetic process	1.09E-03
58	GO:0006572: tyrosine catabolic process	1.09E-03
59	GO:0051259: protein oligomerization	1.09E-03
60	GO:0019438: aromatic compound biosynthetic process	1.09E-03
61	GO:0006624: vacuolar protein processing	1.09E-03
62	GO:0071215: cellular response to abscisic acid stimulus	1.25E-03
63	GO:1902584: positive regulation of response to water deprivation	1.45E-03
64	GO:0006536: glutamate metabolic process	1.45E-03
65	GO:0010600: regulation of auxin biosynthetic process	1.45E-03
66	GO:0042594: response to starvation	1.45E-03
67	GO:0010508: positive regulation of autophagy	1.45E-03
68	GO:0010188: response to microbial phytotoxin	1.45E-03
69	GO:0006542: glutamine biosynthetic process	1.45E-03
70	GO:0009626: plant-type hypersensitive response	1.66E-03
71	GO:0046323: glucose import	1.71E-03
72	GO:0048544: recognition of pollen	1.83E-03
73	GO:0043097: pyrimidine nucleoside salvage	1.85E-03
74	GO:0006979: response to oxidative stress	1.91E-03
75	GO:0048827: phyllome development	2.28E-03
76	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.28E-03
77	GO:0048232: male gamete generation	2.28E-03
78	GO:0043248: proteasome assembly	2.28E-03
79	GO:0042732: D-xylose metabolic process	2.28E-03
80	GO:0006206: pyrimidine nucleobase metabolic process	2.28E-03
81	GO:0010337: regulation of salicylic acid metabolic process	2.28E-03
82	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.28E-03
83	GO:0009567: double fertilization forming a zygote and endosperm	2.54E-03
84	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.74E-03
85	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.74E-03
86	GO:0006694: steroid biosynthetic process	2.74E-03
87	GO:0006955: immune response	3.23E-03
88	GO:0009395: phospholipid catabolic process	3.23E-03
89	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.23E-03
90	GO:0070370: cellular heat acclimation	3.23E-03
91	GO:0071669: plant-type cell wall organization or biogenesis	3.23E-03
92	GO:0009396: folic acid-containing compound biosynthetic process	3.23E-03
93	GO:0010044: response to aluminum ion	3.23E-03
94	GO:0006950: response to stress	3.56E-03
95	GO:0006102: isocitrate metabolic process	3.74E-03
96	GO:0016559: peroxisome fission	3.74E-03
97	GO:0010928: regulation of auxin mediated signaling pathway	3.74E-03
98	GO:0006605: protein targeting	3.74E-03
99	GO:0010078: maintenance of root meristem identity	3.74E-03
100	GO:0010311: lateral root formation	4.14E-03
101	GO:0006526: arginine biosynthetic process	4.29E-03
102	GO:0007338: single fertilization	4.85E-03
103	GO:0009821: alkaloid biosynthetic process	4.85E-03
104	GO:0006099: tricarboxylic acid cycle	5.21E-03
105	GO:0035999: tetrahydrofolate interconversion	5.44E-03
106	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.44E-03
107	GO:0009641: shade avoidance	6.06E-03
108	GO:0051555: flavonol biosynthetic process	6.06E-03
109	GO:0007064: mitotic sister chromatid cohesion	6.06E-03
110	GO:0006535: cysteine biosynthetic process from serine	6.06E-03
111	GO:0042742: defense response to bacterium	6.65E-03
112	GO:0010015: root morphogenesis	6.69E-03
113	GO:0006378: mRNA polyadenylation	6.69E-03
114	GO:0009651: response to salt stress	7.22E-03
115	GO:0006807: nitrogen compound metabolic process	8.04E-03
116	GO:0009809: lignin biosynthetic process	8.67E-03
117	GO:0034605: cellular response to heat	8.75E-03
118	GO:0006541: glutamine metabolic process	8.75E-03
119	GO:0002237: response to molecule of bacterial origin	8.75E-03
120	GO:0007034: vacuolar transport	8.75E-03
121	GO:0009933: meristem structural organization	8.75E-03
122	GO:0080167: response to karrikin	8.86E-03
123	GO:0051603: proteolysis involved in cellular protein catabolic process	8.97E-03
124	GO:0007031: peroxisome organization	9.48E-03
125	GO:0010167: response to nitrate	9.48E-03
126	GO:0005985: sucrose metabolic process	9.48E-03
127	GO:0090351: seedling development	9.48E-03
128	GO:0000162: tryptophan biosynthetic process	1.02E-02
129	GO:0048367: shoot system development	1.06E-02
130	GO:0019344: cysteine biosynthetic process	1.10E-02
131	GO:0055085: transmembrane transport	1.12E-02
132	GO:0006869: lipid transport	1.25E-02
133	GO:0009269: response to desiccation	1.26E-02
134	GO:0031408: oxylipin biosynthetic process	1.26E-02
135	GO:0003333: amino acid transmembrane transport	1.26E-02
136	GO:0009742: brassinosteroid mediated signaling pathway	1.31E-02
137	GO:0035428: hexose transmembrane transport	1.34E-02
138	GO:0030433: ubiquitin-dependent ERAD pathway	1.34E-02
139	GO:0071456: cellular response to hypoxia	1.34E-02
140	GO:0009693: ethylene biosynthetic process	1.43E-02
141	GO:0048364: root development	1.54E-02
142	GO:0015991: ATP hydrolysis coupled proton transport	1.70E-02
143	GO:0042631: cellular response to water deprivation	1.70E-02
144	GO:0000271: polysaccharide biosynthetic process	1.70E-02
145	GO:0006468: protein phosphorylation	1.77E-02
146	GO:0006520: cellular amino acid metabolic process	1.79E-02
147	GO:0010154: fruit development	1.79E-02
148	GO:0009646: response to absence of light	1.88E-02
149	GO:0010183: pollen tube guidance	1.98E-02
150	GO:0009749: response to glucose	1.98E-02
151	GO:0006914: autophagy	2.38E-02
152	GO:0007166: cell surface receptor signaling pathway	2.45E-02
153	GO:0010286: heat acclimation	2.49E-02
154	GO:0071805: potassium ion transmembrane transport	2.49E-02
155	GO:0010468: regulation of gene expression	2.56E-02
156	GO:0009617: response to bacterium	2.56E-02
157	GO:0051607: defense response to virus	2.59E-02
158	GO:0016126: sterol biosynthetic process	2.70E-02
159	GO:0001666: response to hypoxia	2.70E-02
160	GO:0042128: nitrate assimilation	2.92E-02
161	GO:0048573: photoperiodism, flowering	3.04E-02
162	GO:0009611: response to wounding	3.08E-02
163	GO:0016310: phosphorylation	3.09E-02
164	GO:0009826: unidimensional cell growth	3.20E-02
165	GO:0030244: cellulose biosynthetic process	3.27E-02
166	GO:0048767: root hair elongation	3.38E-02
167	GO:0009832: plant-type cell wall biogenesis	3.38E-02
168	GO:0006499: N-terminal protein myristoylation	3.50E-02
169	GO:0006970: response to osmotic stress	3.57E-02
170	GO:0007568: aging	3.62E-02
171	GO:0010043: response to zinc ion	3.62E-02
172	GO:0006865: amino acid transport	3.74E-02
173	GO:0016051: carbohydrate biosynthetic process	3.86E-02
174	GO:0006457: protein folding	4.12E-02
175	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.24E-02
176	GO:0006839: mitochondrial transport	4.24E-02
177	GO:0016192: vesicle-mediated transport	4.32E-02
178	GO:0046777: protein autophosphorylation	4.39E-02
179	GO:0044550: secondary metabolite biosynthetic process	4.46E-02
180	GO:0009744: response to sucrose	4.63E-02
181	GO:0051707: response to other organism	4.63E-02
182	GO:0009640: photomorphogenesis	4.63E-02
183	GO:0009926: auxin polar transport	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0033799: myricetin 3'-O-methyltransferase activity	0.00E+00
2	GO:0047763: caffeate O-methyltransferase activity	0.00E+00
3	GO:0009045: xylose isomerase activity	0.00E+00
4	GO:0030744: luteolin O-methyltransferase activity	0.00E+00
5	GO:0004334: fumarylacetoacetase activity	0.00E+00
6	GO:0103073: anandamide amidohydrolase activity	0.00E+00
7	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
8	GO:0102077: oleamide hydrolase activity	0.00E+00
9	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
10	GO:0030755: quercetin 3-O-methyltransferase activity	0.00E+00
11	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
12	GO:0004370: glycerol kinase activity	0.00E+00
13	GO:0008777: acetylornithine deacetylase activity	0.00E+00
14	GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity	0.00E+00
15	GO:0004356: glutamate-ammonia ligase activity	5.18E-05
16	GO:0009679: hexose:proton symporter activity	2.11E-04
17	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.11E-04
18	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	2.11E-04
19	GO:0001530: lipopolysaccharide binding	2.11E-04
20	GO:0015208: guanine transmembrane transporter activity	2.11E-04
21	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.11E-04
22	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	2.11E-04
23	GO:0015294: solute:cation symporter activity	2.11E-04
24	GO:0003867: 4-aminobutyrate transaminase activity	2.11E-04
25	GO:0052595: aliphatic-amine oxidase activity	2.11E-04
26	GO:0030544: Hsp70 protein binding	2.11E-04
27	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.11E-04
28	GO:0015207: adenine transmembrane transporter activity	2.11E-04
29	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	2.11E-04
30	GO:0017096: acetylserotonin O-methyltransferase activity	2.11E-04
31	GO:0008142: oxysterol binding	2.22E-04
32	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	3.21E-04
33	GO:0047372: acylglycerol lipase activity	4.36E-04
34	GO:0003994: aconitate hydratase activity	4.71E-04
35	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	4.71E-04
36	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	4.71E-04
37	GO:0032934: sterol binding	4.71E-04
38	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	4.71E-04
39	GO:0004061: arylformamidase activity	4.71E-04
40	GO:0004329: formate-tetrahydrofolate ligase activity	4.71E-04
41	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	4.71E-04
42	GO:0004352: glutamate dehydrogenase (NAD+) activity	4.71E-04
43	GO:0019200: carbohydrate kinase activity	4.71E-04
44	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	4.71E-04
45	GO:0004566: beta-glucuronidase activity	4.71E-04
46	GO:0005047: signal recognition particle binding	7.67E-04
47	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	7.67E-04
48	GO:0004383: guanylate cyclase activity	7.67E-04
49	GO:0016595: glutamate binding	7.67E-04
50	GO:0005507: copper ion binding	9.39E-04
51	GO:0004300: enoyl-CoA hydratase activity	1.09E-03
52	GO:0001653: peptide receptor activity	1.09E-03
53	GO:0048027: mRNA 5'-UTR binding	1.09E-03
54	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.09E-03
55	GO:0004108: citrate (Si)-synthase activity	1.09E-03
56	GO:0005524: ATP binding	1.28E-03
57	GO:0004834: tryptophan synthase activity	1.45E-03
58	GO:0043015: gamma-tubulin binding	1.45E-03
59	GO:0015210: uracil transmembrane transporter activity	1.45E-03
60	GO:0003995: acyl-CoA dehydrogenase activity	1.45E-03
61	GO:0005459: UDP-galactose transmembrane transporter activity	1.85E-03
62	GO:0015145: monosaccharide transmembrane transporter activity	1.85E-03
63	GO:0004040: amidase activity	1.85E-03
64	GO:0003997: acyl-CoA oxidase activity	1.85E-03
65	GO:0005471: ATP:ADP antiporter activity	1.85E-03
66	GO:0004197: cysteine-type endopeptidase activity	2.24E-03
67	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.28E-03
68	GO:0036402: proteasome-activating ATPase activity	2.28E-03
69	GO:0008237: metallopeptidase activity	2.70E-03
70	GO:0004124: cysteine synthase activity	2.74E-03
71	GO:0016787: hydrolase activity	2.74E-03
72	GO:0051753: mannan synthase activity	2.74E-03
73	GO:0004849: uridine kinase activity	2.74E-03
74	GO:0004012: phospholipid-translocating ATPase activity	2.74E-03
75	GO:0004620: phospholipase activity	3.23E-03
76	GO:0015144: carbohydrate transmembrane transporter activity	3.23E-03
77	GO:0005351: sugar:proton symporter activity	3.76E-03
78	GO:0050897: cobalt ion binding	4.55E-03
79	GO:0071949: FAD binding	4.85E-03
80	GO:0000989: transcription factor activity, transcription factor binding	4.85E-03
81	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.85E-03
82	GO:0015174: basic amino acid transmembrane transporter activity	5.44E-03
83	GO:0009672: auxin:proton symporter activity	5.44E-03
84	GO:0008171: O-methyltransferase activity	6.06E-03
85	GO:0004713: protein tyrosine kinase activity	6.06E-03
86	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.04E-03
87	GO:0004175: endopeptidase activity	8.75E-03
88	GO:0008131: primary amine oxidase activity	8.75E-03
89	GO:0017025: TBP-class protein binding	9.48E-03
90	GO:0008234: cysteine-type peptidase activity	9.61E-03
91	GO:0015171: amino acid transmembrane transporter activity	9.61E-03
92	GO:0031625: ubiquitin protein ligase binding	9.61E-03
93	GO:0045735: nutrient reservoir activity	1.03E-02
94	GO:0016301: kinase activity	1.05E-02
95	GO:0043424: protein histidine kinase binding	1.18E-02
96	GO:0015079: potassium ion transmembrane transporter activity	1.18E-02
97	GO:0004672: protein kinase activity	1.30E-02
98	GO:0016760: cellulose synthase (UDP-forming) activity	1.43E-02
99	GO:0030170: pyridoxal phosphate binding	1.72E-02
100	GO:0043565: sequence-specific DNA binding	1.77E-02
101	GO:0005355: glucose transmembrane transporter activity	1.88E-02
102	GO:0048038: quinone binding	2.08E-02
103	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.28E-02
104	GO:0016759: cellulose synthase activity	2.38E-02
105	GO:0005200: structural constituent of cytoskeleton	2.49E-02
106	GO:0051213: dioxygenase activity	2.70E-02
107	GO:0008375: acetylglucosaminyltransferase activity	2.92E-02
108	GO:0004806: triglyceride lipase activity	3.04E-02
109	GO:0030247: polysaccharide binding	3.04E-02
110	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.15E-02
111	GO:0005096: GTPase activator activity	3.38E-02
112	GO:0046983: protein dimerization activity	3.45E-02
113	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.86E-02
114	GO:0003993: acid phosphatase activity	3.99E-02
115	GO:0004674: protein serine/threonine kinase activity	4.04E-02
116	GO:0004497: monooxygenase activity	4.11E-02
117	GO:0051539: 4 iron, 4 sulfur cluster binding	4.24E-02
118	GO:0043621: protein self-association	4.89E-02
119	GO:0005516: calmodulin binding	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0005886: plasma membrane	5.00E-07
3	GO:0000323: lytic vacuole	1.76E-05
4	GO:0016021: integral component of membrane	2.05E-05
5	GO:0030173: integral component of Golgi membrane	1.06E-04
6	GO:0005773: vacuole	3.60E-04
7	GO:0005774: vacuolar membrane	9.33E-04
8	GO:0005849: mRNA cleavage factor complex	1.09E-03
9	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.45E-03
10	GO:0005777: peroxisome	2.46E-03
11	GO:0031597: cytosolic proteasome complex	2.74E-03
12	GO:0000815: ESCRT III complex	2.74E-03
13	GO:0031595: nuclear proteasome complex	3.23E-03
14	GO:0009514: glyoxysome	4.29E-03
15	GO:0005779: integral component of peroxisomal membrane	4.29E-03
16	GO:0034045: pre-autophagosomal structure membrane	4.29E-03
17	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.29E-03
18	GO:0005615: extracellular space	4.46E-03
19	GO:0009506: plasmodesma	5.33E-03
20	GO:0008540: proteasome regulatory particle, base subcomplex	5.44E-03
21	GO:0005783: endoplasmic reticulum	5.62E-03
22	GO:0005765: lysosomal membrane	6.69E-03
23	GO:0005764: lysosome	8.75E-03
24	GO:0030176: integral component of endoplasmic reticulum membrane	9.48E-03
25	GO:0016020: membrane	1.11E-02
26	GO:0005794: Golgi apparatus	1.25E-02
27	GO:0005789: endoplasmic reticulum membrane	1.39E-02
28	GO:0005778: peroxisomal membrane	2.49E-02
29	GO:0005737: cytoplasm	2.68E-02