co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G46170

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006490: oligosaccharide-lipid intermediate biosynthetic process	0.00E+00
2	GO:0070070: proton-transporting V-type ATPase complex assembly	0.00E+00
3	GO:0060213: positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	0.00E+00
4	GO:0010378: temperature compensation of the circadian clock	0.00E+00
5	GO:0000390: spliceosomal complex disassembly	0.00E+00
6	GO:0015812: gamma-aminobutyric acid transport	1.16E-04
7	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	1.16E-04
8	GO:1990641: response to iron ion starvation	1.16E-04
9	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	1.16E-04
10	GO:1902265: abscisic acid homeostasis	1.16E-04
11	GO:0071366: cellular response to indolebutyric acid stimulus	1.16E-04
12	GO:0043687: post-translational protein modification	1.16E-04
13	GO:0006811: ion transport	1.73E-04
14	GO:0006101: citrate metabolic process	2.69E-04
15	GO:0030003: cellular cation homeostasis	2.69E-04
16	GO:0045948: positive regulation of translational initiation	2.69E-04
17	GO:0042542: response to hydrogen peroxide	2.81E-04
18	GO:0009768: photosynthesis, light harvesting in photosystem I	4.32E-04
19	GO:0006954: inflammatory response	4.45E-04
20	GO:0016255: attachment of GPI anchor to protein	4.45E-04
21	GO:0042780: tRNA 3'-end processing	4.45E-04
22	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	4.45E-04
23	GO:0042256: mature ribosome assembly	4.45E-04
24	GO:0042344: indole glucosinolate catabolic process	4.45E-04
25	GO:0006882: cellular zinc ion homeostasis	6.38E-04
26	GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly	6.38E-04
27	GO:0015749: monosaccharide transport	6.38E-04
28	GO:0009963: positive regulation of flavonoid biosynthetic process	6.38E-04
29	GO:0042752: regulation of circadian rhythm	8.22E-04
30	GO:0006878: cellular copper ion homeostasis	8.47E-04
31	GO:0009687: abscisic acid metabolic process	8.47E-04
32	GO:0015743: malate transport	8.47E-04
33	GO:0018279: protein N-linked glycosylation via asparagine	1.07E-03
34	GO:0000380: alternative mRNA splicing, via spliceosome	1.07E-03
35	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.07E-03
36	GO:0015691: cadmium ion transport	1.31E-03
37	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.31E-03
38	GO:0007035: vacuolar acidification	1.31E-03
39	GO:0000741: karyogamy	1.31E-03
40	GO:0000060: protein import into nucleus, translocation	1.31E-03
41	GO:0007623: circadian rhythm	1.34E-03
42	GO:0018298: protein-chromophore linkage	1.73E-03
43	GO:0009645: response to low light intensity stimulus	1.84E-03
44	GO:0009769: photosynthesis, light harvesting in photosystem II	1.84E-03
45	GO:0032508: DNA duplex unwinding	2.13E-03
46	GO:0006102: isocitrate metabolic process	2.13E-03
47	GO:0009061: anaerobic respiration	2.13E-03
48	GO:0009819: drought recovery	2.13E-03
49	GO:0006367: transcription initiation from RNA polymerase II promoter	2.43E-03
50	GO:0001510: RNA methylation	2.43E-03
51	GO:0009409: response to cold	2.57E-03
52	GO:0046916: cellular transition metal ion homeostasis	2.74E-03
53	GO:0008643: carbohydrate transport	3.03E-03
54	GO:0080167: response to karrikin	3.05E-03
55	GO:0009970: cellular response to sulfate starvation	3.41E-03
56	GO:0006995: cellular response to nitrogen starvation	3.41E-03
57	GO:0055062: phosphate ion homeostasis	3.41E-03
58	GO:0006816: calcium ion transport	3.76E-03
59	GO:0052544: defense response by callose deposition in cell wall	3.76E-03
60	GO:2000012: regulation of auxin polar transport	4.50E-03
61	GO:0010102: lateral root morphogenesis	4.50E-03
62	GO:0010030: positive regulation of seed germination	5.29E-03
63	GO:0006396: RNA processing	5.49E-03
64	GO:0006406: mRNA export from nucleus	6.12E-03
65	GO:0006874: cellular calcium ion homeostasis	6.56E-03
66	GO:0003333: amino acid transmembrane transport	7.00E-03
67	GO:0030433: ubiquitin-dependent ERAD pathway	7.46E-03
68	GO:0031348: negative regulation of defense response	7.46E-03
69	GO:0051028: mRNA transport	8.88E-03
70	GO:0010501: RNA secondary structure unwinding	9.38E-03
71	GO:0015991: ATP hydrolysis coupled proton transport	9.38E-03
72	GO:0042391: regulation of membrane potential	9.38E-03
73	GO:0010197: polar nucleus fusion	9.89E-03
74	GO:0046323: glucose import	9.89E-03
75	GO:0048544: recognition of pollen	1.04E-02
76	GO:0015986: ATP synthesis coupled proton transport	1.04E-02
77	GO:0006814: sodium ion transport	1.04E-02
78	GO:0009416: response to light stimulus	1.04E-02
79	GO:0006891: intra-Golgi vesicle-mediated transport	1.15E-02
80	GO:0006914: autophagy	1.31E-02
81	GO:0010252: auxin homeostasis	1.31E-02
82	GO:0010286: heat acclimation	1.37E-02
83	GO:0001666: response to hypoxia	1.49E-02
84	GO:0006970: response to osmotic stress	1.54E-02
85	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.55E-02
86	GO:0009627: systemic acquired resistance	1.61E-02
87	GO:0048573: photoperiodism, flowering	1.67E-02
88	GO:0006950: response to stress	1.67E-02
89	GO:0016049: cell growth	1.73E-02
90	GO:0009817: defense response to fungus, incompatible interaction	1.80E-02
91	GO:0048481: plant ovule development	1.80E-02
92	GO:0007165: signal transduction	1.91E-02
93	GO:0010218: response to far red light	1.92E-02
94	GO:0010043: response to zinc ion	1.99E-02
95	GO:0010119: regulation of stomatal movement	1.99E-02
96	GO:0015979: photosynthesis	2.03E-02
97	GO:0045087: innate immune response	2.12E-02
98	GO:0016051: carbohydrate biosynthetic process	2.12E-02
99	GO:0009637: response to blue light	2.12E-02
100	GO:0006099: tricarboxylic acid cycle	2.19E-02
101	GO:0030001: metal ion transport	2.33E-02
102	GO:0009414: response to water deprivation	2.45E-02
103	GO:0051707: response to other organism	2.54E-02
104	GO:0009644: response to high light intensity	2.69E-02
105	GO:0006855: drug transmembrane transport	2.84E-02
106	GO:0000165: MAPK cascade	2.91E-02
107	GO:0009809: lignin biosynthetic process	3.15E-02
108	GO:0006486: protein glycosylation	3.15E-02
109	GO:0009585: red, far-red light phototransduction	3.15E-02
110	GO:0006813: potassium ion transport	3.15E-02
111	GO:0006857: oligopeptide transport	3.30E-02
112	GO:0009651: response to salt stress	3.85E-02
113	GO:0000398: mRNA splicing, via spliceosome	4.47E-02
114	GO:0009738: abscisic acid-activated signaling pathway	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0000026: alpha-1,2-mannosyltransferase activity	0.00E+00
2	GO:0052926: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
3	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
4	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
5	GO:0052918: dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
6	GO:0004377: GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
7	GO:1990446: U1 snRNP binding	0.00E+00
8	GO:0005272: sodium channel activity	0.00E+00
9	GO:0047205: quinate O-hydroxycinnamoyltransferase activity	0.00E+00
10	GO:0047172: shikimate O-hydroxycinnamoyltransferase activity	0.00E+00
11	GO:0004576: oligosaccharyl transferase activity	1.15E-05
12	GO:0004525: ribonuclease III activity	7.12E-05
13	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.16E-04
14	GO:0009679: hexose:proton symporter activity	1.16E-04
15	GO:0046870: cadmium ion binding	1.16E-04
16	GO:0015180: L-alanine transmembrane transporter activity	2.69E-04
17	GO:0032791: lead ion binding	2.69E-04
18	GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters	2.69E-04
19	GO:0003994: aconitate hydratase activity	2.69E-04
20	GO:0004839: ubiquitin activating enzyme activity	2.69E-04
21	GO:0003923: GPI-anchor transamidase activity	2.69E-04
22	GO:0031409: pigment binding	3.52E-04
23	GO:0004096: catalase activity	4.45E-04
24	GO:0017150: tRNA dihydrouridine synthase activity	4.45E-04
25	GO:0042781: 3'-tRNA processing endoribonuclease activity	4.45E-04
26	GO:0015086: cadmium ion transmembrane transporter activity	6.38E-04
27	GO:0015189: L-lysine transmembrane transporter activity	6.38E-04
28	GO:0048027: mRNA 5'-UTR binding	6.38E-04
29	GO:0015181: arginine transmembrane transporter activity	6.38E-04
30	GO:0005253: anion channel activity	8.47E-04
31	GO:0004737: pyruvate decarboxylase activity	8.47E-04
32	GO:0005313: L-glutamate transmembrane transporter activity	8.47E-04
33	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.07E-03
34	GO:0010294: abscisic acid glucosyltransferase activity	1.07E-03
35	GO:0015145: monosaccharide transmembrane transporter activity	1.07E-03
36	GO:0008641: small protein activating enzyme activity	1.07E-03
37	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.07E-03
38	GO:0005351: sugar:proton symporter activity	1.30E-03
39	GO:0051117: ATPase binding	1.31E-03
40	GO:0030976: thiamine pyrophosphate binding	1.31E-03
41	GO:0000293: ferric-chelate reductase activity	1.31E-03
42	GO:0031369: translation initiation factor binding	1.31E-03
43	GO:0016168: chlorophyll binding	1.41E-03
44	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.56E-03
45	GO:0005261: cation channel activity	1.56E-03
46	GO:0016831: carboxy-lyase activity	1.84E-03
47	GO:0015140: malate transmembrane transporter activity	1.84E-03
48	GO:0003697: single-stranded DNA binding	2.18E-03
49	GO:0005267: potassium channel activity	2.43E-03
50	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.74E-03
51	GO:0015020: glucuronosyltransferase activity	3.41E-03
52	GO:0046961: proton-transporting ATPase activity, rotational mechanism	3.76E-03
53	GO:0004722: protein serine/threonine phosphatase activity	4.31E-03
54	GO:0005262: calcium channel activity	4.50E-03
55	GO:0004970: ionotropic glutamate receptor activity	5.29E-03
56	GO:0030552: cAMP binding	5.29E-03
57	GO:0030553: cGMP binding	5.29E-03
58	GO:0005217: intracellular ligand-gated ion channel activity	5.29E-03
59	GO:0005216: ion channel activity	6.56E-03
60	GO:0004707: MAP kinase activity	7.00E-03
61	GO:0015144: carbohydrate transmembrane transporter activity	7.99E-03
62	GO:0003727: single-stranded RNA binding	8.40E-03
63	GO:0015297: antiporter activity	8.79E-03
64	GO:0005249: voltage-gated potassium channel activity	9.38E-03
65	GO:0030551: cyclic nucleotide binding	9.38E-03
66	GO:0008536: Ran GTPase binding	9.89E-03
67	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.17E-02
68	GO:0046982: protein heterodimerization activity	1.40E-02
69	GO:0008375: acetylglucosaminyltransferase activity	1.61E-02
70	GO:0046872: metal ion binding	1.81E-02
71	GO:0050897: cobalt ion binding	1.99E-02
72	GO:0051539: 4 iron, 4 sulfur cluster binding	2.33E-02
73	GO:0003824: catalytic activity	2.84E-02
74	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.15E-02
75	GO:0003690: double-stranded DNA binding	3.22E-02
76	GO:0015171: amino acid transmembrane transporter activity	3.38E-02
77	GO:0016301: kinase activity	3.50E-02
78	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.79E-02
79	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.79E-02
80	GO:0016874: ligase activity	3.87E-02
81	GO:0022857: transmembrane transporter activity	3.87E-02
82	GO:0016887: ATPase activity	4.05E-02
83	GO:0003729: mRNA binding	4.13E-02
84	GO:0008026: ATP-dependent helicase activity	4.21E-02
85	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0071008: U2-type post-mRNA release spliceosomal complex	0.00E+00
2	GO:0031981: nuclear lumen	0.00E+00
3	GO:0016021: integral component of membrane	5.26E-05
4	GO:0012510: trans-Golgi network transport vesicle membrane	1.16E-04
5	GO:0030076: light-harvesting complex	3.15E-04
6	GO:0016020: membrane	4.20E-04
7	GO:0042765: GPI-anchor transamidase complex	4.45E-04
8	GO:0005777: peroxisome	5.61E-04
9	GO:0005783: endoplasmic reticulum	6.18E-04
10	GO:0009522: photosystem I	8.22E-04
11	GO:0005776: autophagosome	8.47E-04
12	GO:0016471: vacuolar proton-transporting V-type ATPase complex	8.47E-04
13	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	1.07E-03
14	GO:0008250: oligosaccharyltransferase complex	1.07E-03
15	GO:0005886: plasma membrane	1.39E-03
16	GO:0016363: nuclear matrix	1.56E-03
17	GO:0000786: nucleosome	2.09E-03
18	GO:0031966: mitochondrial membrane	3.50E-03
19	GO:0005665: DNA-directed RNA polymerase II, core complex	4.13E-03
20	GO:0010008: endosome membrane	4.58E-03
21	GO:0005795: Golgi stack	5.29E-03
22	GO:0010287: plastoglobule	6.32E-03
23	GO:0042651: thylakoid membrane	6.56E-03
24	GO:0031410: cytoplasmic vesicle	7.46E-03
25	GO:0009705: plant-type vacuole membrane	9.21E-03
26	GO:0009523: photosystem II	1.09E-02
27	GO:0031965: nuclear membrane	1.09E-02
28	GO:0000932: P-body	1.49E-02
29	GO:0005643: nuclear pore	1.80E-02
30	GO:0000325: plant-type vacuole	1.99E-02
31	GO:0005622: intracellular	2.14E-02
32	GO:0005773: vacuole	2.73E-02
33	GO:0005887: integral component of plasma membrane	3.56E-02
34	GO:0005654: nucleoplasm	4.65E-02