GO Enrichment Analysis of Co-expressed Genes with
AT2G46060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 2 | GO:0006987: activation of signaling protein activity involved in unfolded protein response | 0.00E+00 |
| 3 | GO:0036258: multivesicular body assembly | 0.00E+00 |
| 4 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 5 | GO:0048867: stem cell fate determination | 0.00E+00 |
| 6 | GO:0000188: inactivation of MAPK activity | 0.00E+00 |
| 7 | GO:0016236: macroautophagy | 0.00E+00 |
| 8 | GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase | 0.00E+00 |
| 9 | GO:0007160: cell-matrix adhesion | 0.00E+00 |
| 10 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 11 | GO:0006635: fatty acid beta-oxidation | 1.19E-05 |
| 12 | GO:0019673: GDP-mannose metabolic process | 5.48E-05 |
| 13 | GO:0051014: actin filament severing | 5.48E-05 |
| 14 | GO:0055071: manganese ion homeostasis | 5.48E-05 |
| 15 | GO:0099636: cytoplasmic streaming | 5.48E-05 |
| 16 | GO:0031338: regulation of vesicle fusion | 5.48E-05 |
| 17 | GO:0046167: glycerol-3-phosphate biosynthetic process | 5.48E-05 |
| 18 | GO:0030242: pexophagy | 5.48E-05 |
| 19 | GO:0007584: response to nutrient | 1.34E-04 |
| 20 | GO:0019483: beta-alanine biosynthetic process | 1.34E-04 |
| 21 | GO:0019395: fatty acid oxidation | 1.34E-04 |
| 22 | GO:0050684: regulation of mRNA processing | 1.34E-04 |
| 23 | GO:0006641: triglyceride metabolic process | 1.34E-04 |
| 24 | GO:0006212: uracil catabolic process | 1.34E-04 |
| 25 | GO:0009695: jasmonic acid biosynthetic process | 1.57E-04 |
| 26 | GO:1900055: regulation of leaf senescence | 2.28E-04 |
| 27 | GO:0019563: glycerol catabolic process | 2.28E-04 |
| 28 | GO:0032784: regulation of DNA-templated transcription, elongation | 2.28E-04 |
| 29 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 2.28E-04 |
| 30 | GO:0090630: activation of GTPase activity | 2.28E-04 |
| 31 | GO:0009399: nitrogen fixation | 3.33E-04 |
| 32 | GO:0070676: intralumenal vesicle formation | 3.33E-04 |
| 33 | GO:0006882: cellular zinc ion homeostasis | 3.33E-04 |
| 34 | GO:0048194: Golgi vesicle budding | 3.33E-04 |
| 35 | GO:2001289: lipid X metabolic process | 3.33E-04 |
| 36 | GO:0019048: modulation by virus of host morphology or physiology | 3.33E-04 |
| 37 | GO:0006072: glycerol-3-phosphate metabolic process | 3.33E-04 |
| 38 | GO:0006623: protein targeting to vacuole | 3.37E-04 |
| 39 | GO:0006891: intra-Golgi vesicle-mediated transport | 3.60E-04 |
| 40 | GO:0010107: potassium ion import | 4.45E-04 |
| 41 | GO:0045324: late endosome to vacuole transport | 4.45E-04 |
| 42 | GO:0010188: response to microbial phytotoxin | 4.45E-04 |
| 43 | GO:0006878: cellular copper ion homeostasis | 4.45E-04 |
| 44 | GO:0006542: glutamine biosynthetic process | 4.45E-04 |
| 45 | GO:0051764: actin crosslink formation | 4.45E-04 |
| 46 | GO:0034052: positive regulation of plant-type hypersensitive response | 5.66E-04 |
| 47 | GO:0010225: response to UV-C | 5.66E-04 |
| 48 | GO:0006888: ER to Golgi vesicle-mediated transport | 6.07E-04 |
| 49 | GO:0006828: manganese ion transport | 6.92E-04 |
| 50 | GO:0006751: glutathione catabolic process | 6.92E-04 |
| 51 | GO:0033962: cytoplasmic mRNA processing body assembly | 8.25E-04 |
| 52 | GO:0048280: vesicle fusion with Golgi apparatus | 8.25E-04 |
| 53 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 9.62E-04 |
| 54 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 9.62E-04 |
| 55 | GO:0051693: actin filament capping | 9.62E-04 |
| 56 | GO:0006875: cellular metal ion homeostasis | 1.11E-03 |
| 57 | GO:0006605: protein targeting | 1.11E-03 |
| 58 | GO:0006886: intracellular protein transport | 1.14E-03 |
| 59 | GO:0030968: endoplasmic reticulum unfolded protein response | 1.26E-03 |
| 60 | GO:0043562: cellular response to nitrogen levels | 1.26E-03 |
| 61 | GO:0009846: pollen germination | 1.32E-03 |
| 62 | GO:0006397: mRNA processing | 1.49E-03 |
| 63 | GO:0006417: regulation of translation | 1.57E-03 |
| 64 | GO:0030042: actin filament depolymerization | 1.58E-03 |
| 65 | GO:0006896: Golgi to vacuole transport | 1.75E-03 |
| 66 | GO:0006816: calcium ion transport | 1.93E-03 |
| 67 | GO:0010152: pollen maturation | 2.11E-03 |
| 68 | GO:0006829: zinc II ion transport | 2.30E-03 |
| 69 | GO:0002237: response to molecule of bacterial origin | 2.49E-03 |
| 70 | GO:0007015: actin filament organization | 2.49E-03 |
| 71 | GO:0007010: cytoskeleton organization | 3.11E-03 |
| 72 | GO:0051017: actin filament bundle assembly | 3.11E-03 |
| 73 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.11E-03 |
| 74 | GO:0006874: cellular calcium ion homeostasis | 3.32E-03 |
| 75 | GO:0010073: meristem maintenance | 3.32E-03 |
| 76 | GO:0010150: leaf senescence | 3.43E-03 |
| 77 | GO:0031408: oxylipin biosynthetic process | 3.54E-03 |
| 78 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.83E-03 |
| 79 | GO:0042147: retrograde transport, endosome to Golgi | 4.47E-03 |
| 80 | GO:0051028: mRNA transport | 4.47E-03 |
| 81 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 4.47E-03 |
| 82 | GO:0010501: RNA secondary structure unwinding | 4.71E-03 |
| 83 | GO:0010118: stomatal movement | 4.71E-03 |
| 84 | GO:0055072: iron ion homeostasis | 5.48E-03 |
| 85 | GO:0016032: viral process | 6.00E-03 |
| 86 | GO:0009630: gravitropism | 6.00E-03 |
| 87 | GO:0006914: autophagy | 6.55E-03 |
| 88 | GO:0046777: protein autophosphorylation | 6.99E-03 |
| 89 | GO:0016579: protein deubiquitination | 7.11E-03 |
| 90 | GO:0051607: defense response to virus | 7.11E-03 |
| 91 | GO:0009816: defense response to bacterium, incompatible interaction | 7.69E-03 |
| 92 | GO:0042128: nitrate assimilation | 7.99E-03 |
| 93 | GO:0016049: cell growth | 8.60E-03 |
| 94 | GO:0006468: protein phosphorylation | 9.21E-03 |
| 95 | GO:0048767: root hair elongation | 9.22E-03 |
| 96 | GO:0006811: ion transport | 9.54E-03 |
| 97 | GO:0015031: protein transport | 9.66E-03 |
| 98 | GO:0048364: root development | 1.01E-02 |
| 99 | GO:0045087: innate immune response | 1.05E-02 |
| 100 | GO:0016051: carbohydrate biosynthetic process | 1.05E-02 |
| 101 | GO:0006099: tricarboxylic acid cycle | 1.09E-02 |
| 102 | GO:0030001: metal ion transport | 1.15E-02 |
| 103 | GO:0009744: response to sucrose | 1.26E-02 |
| 104 | GO:0000209: protein polyubiquitination | 1.29E-02 |
| 105 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.44E-02 |
| 106 | GO:0031347: regulation of defense response | 1.44E-02 |
| 107 | GO:0010224: response to UV-B | 1.59E-02 |
| 108 | GO:0006096: glycolytic process | 1.75E-02 |
| 109 | GO:0009611: response to wounding | 1.76E-02 |
| 110 | GO:0048367: shoot system development | 1.79E-02 |
| 111 | GO:0035556: intracellular signal transduction | 1.81E-02 |
| 112 | GO:0009626: plant-type hypersensitive response | 1.83E-02 |
| 113 | GO:0018105: peptidyl-serine phosphorylation | 2.04E-02 |
| 114 | GO:0006396: RNA processing | 2.04E-02 |
| 115 | GO:0051726: regulation of cell cycle | 2.08E-02 |
| 116 | GO:0009742: brassinosteroid mediated signaling pathway | 2.08E-02 |
| 117 | GO:0009845: seed germination | 2.47E-02 |
| 118 | GO:0016036: cellular response to phosphate starvation | 2.80E-02 |
| 119 | GO:0006470: protein dephosphorylation | 3.24E-02 |
| 120 | GO:0008380: RNA splicing | 3.34E-02 |
| 121 | GO:0009617: response to bacterium | 3.34E-02 |
| 122 | GO:0009826: unidimensional cell growth | 3.91E-02 |
| 123 | GO:0007049: cell cycle | 4.34E-02 |
| 124 | GO:0080167: response to karrikin | 4.68E-02 |
| 125 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.79E-02 |
| 126 | GO:0016192: vesicle-mediated transport | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004370: glycerol kinase activity | 0.00E+00 |
| 2 | GO:0015410: manganese-transporting ATPase activity | 0.00E+00 |
| 3 | GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity | 0.00E+00 |
| 4 | GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity | 0.00E+00 |
| 5 | GO:0005548: phospholipid transporter activity | 0.00E+00 |
| 6 | GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity | 0.00E+00 |
| 7 | GO:0003729: mRNA binding | 9.38E-06 |
| 8 | GO:0004012: phospholipid-translocating ATPase activity | 1.21E-05 |
| 9 | GO:0005524: ATP binding | 2.01E-05 |
| 10 | GO:0008446: GDP-mannose 4,6-dehydratase activity | 5.48E-05 |
| 11 | GO:0019707: protein-cysteine S-acyltransferase activity | 5.48E-05 |
| 12 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 5.48E-05 |
| 13 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 8.50E-05 |
| 14 | GO:0005388: calcium-transporting ATPase activity | 8.50E-05 |
| 15 | GO:0003988: acetyl-CoA C-acyltransferase activity | 1.34E-04 |
| 16 | GO:0019200: carbohydrate kinase activity | 1.34E-04 |
| 17 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 1.34E-04 |
| 18 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.74E-04 |
| 19 | GO:0004383: guanylate cyclase activity | 2.28E-04 |
| 20 | GO:0005047: signal recognition particle binding | 2.28E-04 |
| 21 | GO:0019829: cation-transporting ATPase activity | 2.28E-04 |
| 22 | GO:0004108: citrate (Si)-synthase activity | 3.33E-04 |
| 23 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 3.33E-04 |
| 24 | GO:0004300: enoyl-CoA hydratase activity | 3.33E-04 |
| 25 | GO:0001653: peptide receptor activity | 3.33E-04 |
| 26 | GO:0017137: Rab GTPase binding | 5.66E-04 |
| 27 | GO:0004356: glutamate-ammonia ligase activity | 5.66E-04 |
| 28 | GO:0000287: magnesium ion binding | 6.57E-04 |
| 29 | GO:0003730: mRNA 3'-UTR binding | 8.25E-04 |
| 30 | GO:0004674: protein serine/threonine kinase activity | 1.10E-03 |
| 31 | GO:0004525: ribonuclease III activity | 1.11E-03 |
| 32 | GO:0005267: potassium channel activity | 1.26E-03 |
| 33 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.41E-03 |
| 34 | GO:0030955: potassium ion binding | 1.58E-03 |
| 35 | GO:0004743: pyruvate kinase activity | 1.58E-03 |
| 36 | GO:0015020: glucuronosyltransferase activity | 1.75E-03 |
| 37 | GO:0004521: endoribonuclease activity | 2.11E-03 |
| 38 | GO:0004725: protein tyrosine phosphatase activity | 2.90E-03 |
| 39 | GO:0043130: ubiquitin binding | 3.11E-03 |
| 40 | GO:0043424: protein histidine kinase binding | 3.32E-03 |
| 41 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 3.54E-03 |
| 42 | GO:0004176: ATP-dependent peptidase activity | 3.54E-03 |
| 43 | GO:0046873: metal ion transmembrane transporter activity | 4.96E-03 |
| 44 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 4.96E-03 |
| 45 | GO:0004872: receptor activity | 5.48E-03 |
| 46 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 5.74E-03 |
| 47 | GO:0050660: flavin adenine dinucleotide binding | 6.10E-03 |
| 48 | GO:0051015: actin filament binding | 6.27E-03 |
| 49 | GO:0008237: metallopeptidase activity | 6.83E-03 |
| 50 | GO:0008375: acetylglucosaminyltransferase activity | 7.99E-03 |
| 51 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 7.99E-03 |
| 52 | GO:0004004: ATP-dependent RNA helicase activity | 8.29E-03 |
| 53 | GO:0004683: calmodulin-dependent protein kinase activity | 8.29E-03 |
| 54 | GO:0005096: GTPase activator activity | 9.22E-03 |
| 55 | GO:0004222: metalloendopeptidase activity | 9.54E-03 |
| 56 | GO:0005515: protein binding | 9.82E-03 |
| 57 | GO:0009055: electron carrier activity | 1.04E-02 |
| 58 | GO:0000149: SNARE binding | 1.12E-02 |
| 59 | GO:0004672: protein kinase activity | 1.16E-02 |
| 60 | GO:0005484: SNAP receptor activity | 1.26E-02 |
| 61 | GO:0035091: phosphatidylinositol binding | 1.33E-02 |
| 62 | GO:0016887: ATPase activity | 1.50E-02 |
| 63 | GO:0015171: amino acid transmembrane transporter activity | 1.67E-02 |
| 64 | GO:0003779: actin binding | 1.95E-02 |
| 65 | GO:0008026: ATP-dependent helicase activity | 2.08E-02 |
| 66 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.38E-02 |
| 67 | GO:0005507: copper ion binding | 2.45E-02 |
| 68 | GO:0005516: calmodulin binding | 2.59E-02 |
| 69 | GO:0008565: protein transporter activity | 2.66E-02 |
| 70 | GO:0005525: GTP binding | 2.83E-02 |
| 71 | GO:0003723: RNA binding | 3.05E-02 |
| 72 | GO:0016301: kinase activity | 3.44E-02 |
| 73 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.49E-02 |
| 74 | GO:0005215: transporter activity | 3.85E-02 |
| 75 | GO:0003682: chromatin binding | 4.18E-02 |
| 76 | GO:0004497: monooxygenase activity | 4.68E-02 |
| 77 | GO:0061630: ubiquitin protein ligase activity | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005785: signal recognition particle receptor complex | 0.00E+00 |
| 2 | GO:0008305: integrin complex | 0.00E+00 |
| 3 | GO:0071561: nucleus-vacuole junction | 0.00E+00 |
| 4 | GO:0031902: late endosome membrane | 3.42E-08 |
| 5 | GO:0005794: Golgi apparatus | 4.75E-06 |
| 6 | GO:0005802: trans-Golgi network | 1.66E-05 |
| 7 | GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II | 5.48E-05 |
| 8 | GO:0000138: Golgi trans cisterna | 5.48E-05 |
| 9 | GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I | 5.48E-05 |
| 10 | GO:0000139: Golgi membrane | 6.73E-05 |
| 11 | GO:0005789: endoplasmic reticulum membrane | 9.05E-05 |
| 12 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 2.28E-04 |
| 13 | GO:0005770: late endosome | 2.91E-04 |
| 14 | GO:0005776: autophagosome | 4.45E-04 |
| 15 | GO:0005774: vacuolar membrane | 5.47E-04 |
| 16 | GO:0000813: ESCRT I complex | 5.66E-04 |
| 17 | GO:0005783: endoplasmic reticulum | 5.98E-04 |
| 18 | GO:0030140: trans-Golgi network transport vesicle | 6.92E-04 |
| 19 | GO:0030127: COPII vesicle coat | 6.92E-04 |
| 20 | GO:0012507: ER to Golgi transport vesicle membrane | 1.11E-03 |
| 21 | GO:0005768: endosome | 1.18E-03 |
| 22 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.26E-03 |
| 23 | GO:0009514: glyoxysome | 1.26E-03 |
| 24 | GO:0010494: cytoplasmic stress granule | 1.41E-03 |
| 25 | GO:0005829: cytosol | 1.54E-03 |
| 26 | GO:0016021: integral component of membrane | 1.64E-03 |
| 27 | GO:0005884: actin filament | 1.93E-03 |
| 28 | GO:0012505: endomembrane system | 1.94E-03 |
| 29 | GO:0005795: Golgi stack | 2.70E-03 |
| 30 | GO:0005769: early endosome | 2.90E-03 |
| 31 | GO:0005777: peroxisome | 3.47E-03 |
| 32 | GO:0031410: cytoplasmic vesicle | 3.77E-03 |
| 33 | GO:0005622: intracellular | 6.03E-03 |
| 34 | GO:0000932: P-body | 7.40E-03 |
| 35 | GO:0005643: nuclear pore | 8.91E-03 |
| 36 | GO:0000325: plant-type vacuole | 9.86E-03 |
| 37 | GO:0031201: SNARE complex | 1.19E-02 |
| 38 | GO:0005856: cytoskeleton | 1.37E-02 |
| 39 | GO:0010008: endosome membrane | 1.79E-02 |
| 40 | GO:0009506: plasmodesma | 2.31E-02 |
| 41 | GO:0005623: cell | 2.38E-02 |
| 42 | GO:0005759: mitochondrial matrix | 2.75E-02 |
| 43 | GO:0005886: plasma membrane | 3.18E-02 |
| 44 | GO:0005737: cytoplasm | 3.60E-02 |
| 45 | GO:0009536: plastid | 4.26E-02 |
| 46 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.29E-02 |