GO Enrichment Analysis of Co-expressed Genes with
AT2G45660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1904962: plastid to vacuole vesicle-mediated transport | 0.00E+00 |
| 2 | GO:0042906: xanthine transport | 0.00E+00 |
| 3 | GO:0071211: protein targeting to vacuole involved in autophagy | 0.00E+00 |
| 4 | GO:1902553: positive regulation of catalase activity | 0.00E+00 |
| 5 | GO:0046677: response to antibiotic | 0.00E+00 |
| 6 | GO:0010206: photosystem II repair | 4.35E-05 |
| 7 | GO:0018002: N-terminal peptidyl-glutamic acid acetylation | 6.26E-05 |
| 8 | GO:0006475: internal protein amino acid acetylation | 6.26E-05 |
| 9 | GO:0006474: N-terminal protein amino acid acetylation | 6.26E-05 |
| 10 | GO:0017198: N-terminal peptidyl-serine acetylation | 6.26E-05 |
| 11 | GO:0080173: male-female gamete recognition during double fertilization | 6.26E-05 |
| 12 | GO:0015857: uracil transport | 1.52E-04 |
| 13 | GO:0000256: allantoin catabolic process | 1.52E-04 |
| 14 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 1.52E-04 |
| 15 | GO:0015720: allantoin transport | 1.52E-04 |
| 16 | GO:0071712: ER-associated misfolded protein catabolic process | 1.52E-04 |
| 17 | GO:0032527: protein exit from endoplasmic reticulum | 1.52E-04 |
| 18 | GO:0010136: ureide catabolic process | 2.57E-04 |
| 19 | GO:0045165: cell fate commitment | 2.57E-04 |
| 20 | GO:1902448: positive regulation of shade avoidance | 2.57E-04 |
| 21 | GO:0032940: secretion by cell | 2.57E-04 |
| 22 | GO:0071705: nitrogen compound transport | 2.57E-04 |
| 23 | GO:0090308: regulation of methylation-dependent chromatin silencing | 3.73E-04 |
| 24 | GO:0006145: purine nucleobase catabolic process | 3.73E-04 |
| 25 | GO:0015846: polyamine transport | 4.99E-04 |
| 26 | GO:0016123: xanthophyll biosynthetic process | 6.32E-04 |
| 27 | GO:0009957: epidermal cell fate specification | 6.32E-04 |
| 28 | GO:0002238: response to molecule of fungal origin | 7.73E-04 |
| 29 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.73E-04 |
| 30 | GO:0010189: vitamin E biosynthetic process | 9.20E-04 |
| 31 | GO:0032880: regulation of protein localization | 1.07E-03 |
| 32 | GO:0006972: hyperosmotic response | 1.41E-03 |
| 33 | GO:0030042: actin filament depolymerization | 1.77E-03 |
| 34 | GO:0006535: cysteine biosynthetic process from serine | 1.96E-03 |
| 35 | GO:0009688: abscisic acid biosynthetic process | 1.96E-03 |
| 36 | GO:0010216: maintenance of DNA methylation | 2.17E-03 |
| 37 | GO:0007015: actin filament organization | 2.80E-03 |
| 38 | GO:0090351: seedling development | 3.03E-03 |
| 39 | GO:0019344: cysteine biosynthetic process | 3.49E-03 |
| 40 | GO:0010026: trichome differentiation | 3.74E-03 |
| 41 | GO:0006366: transcription from RNA polymerase II promoter | 3.98E-03 |
| 42 | GO:0003333: amino acid transmembrane transport | 3.98E-03 |
| 43 | GO:0010182: sugar mediated signaling pathway | 5.59E-03 |
| 44 | GO:0008654: phospholipid biosynthetic process | 6.17E-03 |
| 45 | GO:0006970: response to osmotic stress | 6.75E-03 |
| 46 | GO:0030163: protein catabolic process | 7.07E-03 |
| 47 | GO:0009723: response to ethylene | 7.25E-03 |
| 48 | GO:0009567: double fertilization forming a zygote and endosperm | 7.38E-03 |
| 49 | GO:0080167: response to karrikin | 7.77E-03 |
| 50 | GO:0048573: photoperiodism, flowering | 9.36E-03 |
| 51 | GO:0006950: response to stress | 9.36E-03 |
| 52 | GO:0016311: dephosphorylation | 9.70E-03 |
| 53 | GO:0016567: protein ubiquitination | 9.71E-03 |
| 54 | GO:0010119: regulation of stomatal movement | 1.11E-02 |
| 55 | GO:0007568: aging | 1.11E-02 |
| 56 | GO:0010114: response to red light | 1.42E-02 |
| 57 | GO:0009640: photomorphogenesis | 1.42E-02 |
| 58 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.63E-02 |
| 59 | GO:0009909: regulation of flower development | 1.89E-02 |
| 60 | GO:0009416: response to light stimulus | 2.05E-02 |
| 61 | GO:0035556: intracellular signal transduction | 2.16E-02 |
| 62 | GO:0009553: embryo sac development | 2.21E-02 |
| 63 | GO:0016310: phosphorylation | 2.76E-02 |
| 64 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.78E-02 |
| 65 | GO:0006413: translational initiation | 3.17E-02 |
| 66 | GO:0007623: circadian rhythm | 3.33E-02 |
| 67 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.44E-02 |
| 68 | GO:0006470: protein dephosphorylation | 3.66E-02 |
| 69 | GO:0008380: RNA splicing | 3.77E-02 |
| 70 | GO:0009414: response to water deprivation | 4.03E-02 |
| 71 | GO:0009651: response to salt stress | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 2 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 3 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 4 | GO:0042907: xanthine transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 6.26E-05 |
| 6 | GO:1990189: peptide-serine-N-acetyltransferase activity | 6.26E-05 |
| 7 | GO:1990190: peptide-glutamate-N-acetyltransferase activity | 6.26E-05 |
| 8 | GO:0050017: L-3-cyanoalanine synthase activity | 1.52E-04 |
| 9 | GO:0004103: choline kinase activity | 1.52E-04 |
| 10 | GO:0005274: allantoin uptake transmembrane transporter activity | 1.52E-04 |
| 11 | GO:0044390: ubiquitin-like protein conjugating enzyme binding | 1.52E-04 |
| 12 | GO:0004848: ureidoglycolate hydrolase activity | 2.57E-04 |
| 13 | GO:0015203: polyamine transmembrane transporter activity | 3.73E-04 |
| 14 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 4.99E-04 |
| 15 | GO:0015210: uracil transmembrane transporter activity | 4.99E-04 |
| 16 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 6.32E-04 |
| 17 | GO:0051538: 3 iron, 4 sulfur cluster binding | 6.32E-04 |
| 18 | GO:0004462: lactoylglutathione lyase activity | 7.73E-04 |
| 19 | GO:0004605: phosphatidate cytidylyltransferase activity | 7.73E-04 |
| 20 | GO:0004124: cysteine synthase activity | 9.20E-04 |
| 21 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 1.24E-03 |
| 22 | GO:0071949: FAD binding | 1.58E-03 |
| 23 | GO:0015174: basic amino acid transmembrane transporter activity | 1.77E-03 |
| 24 | GO:0031625: ubiquitin protein ligase binding | 1.85E-03 |
| 25 | GO:0008270: zinc ion binding | 1.88E-03 |
| 26 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 1.96E-03 |
| 27 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.58E-03 |
| 28 | GO:0004842: ubiquitin-protein transferase activity | 2.94E-03 |
| 29 | GO:0003712: transcription cofactor activity | 3.03E-03 |
| 30 | GO:0016829: lyase activity | 3.20E-03 |
| 31 | GO:0001046: core promoter sequence-specific DNA binding | 3.49E-03 |
| 32 | GO:0008080: N-acetyltransferase activity | 5.59E-03 |
| 33 | GO:0008237: metallopeptidase activity | 7.70E-03 |
| 34 | GO:0061630: ubiquitin protein ligase activity | 8.18E-03 |
| 35 | GO:0008236: serine-type peptidase activity | 9.70E-03 |
| 36 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.11E-02 |
| 37 | GO:0003993: acid phosphatase activity | 1.23E-02 |
| 38 | GO:0015293: symporter activity | 1.54E-02 |
| 39 | GO:0003779: actin binding | 2.21E-02 |
| 40 | GO:0016746: transferase activity, transferring acyl groups | 2.30E-02 |
| 41 | GO:0016787: hydrolase activity | 2.33E-02 |
| 42 | GO:0030170: pyridoxal phosphate binding | 2.85E-02 |
| 43 | GO:0004252: serine-type endopeptidase activity | 2.85E-02 |
| 44 | GO:0015297: antiporter activity | 3.22E-02 |
| 45 | GO:0003743: translation initiation factor activity | 3.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031415: NatA complex | 1.52E-04 |
| 2 | GO:0009543: chloroplast thylakoid lumen | 3.19E-04 |
| 3 | GO:0036513: Derlin-1 retrotranslocation complex | 3.73E-04 |
| 4 | GO:0031969: chloroplast membrane | 1.08E-03 |
| 5 | GO:0031977: thylakoid lumen | 1.16E-03 |
| 6 | GO:0005720: nuclear heterochromatin | 1.58E-03 |
| 7 | GO:0015629: actin cytoskeleton | 4.50E-03 |
| 8 | GO:0009534: chloroplast thylakoid | 4.61E-03 |
| 9 | GO:0009570: chloroplast stroma | 9.40E-03 |
| 10 | GO:0000151: ubiquitin ligase complex | 1.01E-02 |
| 11 | GO:0019005: SCF ubiquitin ligase complex | 1.01E-02 |
| 12 | GO:0005681: spliceosomal complex | 1.98E-02 |
| 13 | GO:0009706: chloroplast inner membrane | 2.25E-02 |
| 14 | GO:0009579: thylakoid | 2.45E-02 |
| 15 | GO:0009535: chloroplast thylakoid membrane | 2.46E-02 |
| 16 | GO:0010287: plastoglobule | 2.55E-02 |
| 17 | GO:0005634: nucleus | 2.63E-02 |
| 18 | GO:0005623: cell | 2.70E-02 |
| 19 | GO:0009507: chloroplast | 2.88E-02 |
| 20 | GO:0005783: endoplasmic reticulum | 3.35E-02 |
| 21 | GO:0005622: intracellular | 3.63E-02 |