co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G45240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000027: ribosomal large subunit assembly	4.61E-07
2	GO:1990258: histone glutamine methylation	2.64E-05
3	GO:0009270: response to humidity	2.64E-05
4	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	2.64E-05
5	GO:0000494: box C/D snoRNA 3'-end processing	2.64E-05
6	GO:0019725: cellular homeostasis	6.72E-05
7	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	6.72E-05
8	GO:1902626: assembly of large subunit precursor of preribosome	1.18E-04
9	GO:0045793: positive regulation of cell size	1.18E-04
10	GO:0010186: positive regulation of cellular defense response	1.18E-04
11	GO:0045039: protein import into mitochondrial inner membrane	1.18E-04
12	GO:0009627: systemic acquired resistance	2.29E-04
13	GO:0051205: protein insertion into membrane	2.39E-04
14	GO:0060548: negative regulation of cell death	2.39E-04
15	GO:0031167: rRNA methylation	3.07E-04
16	GO:0006461: protein complex assembly	3.07E-04
17	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.78E-04
18	GO:0010405: arabinogalactan protein metabolic process	3.78E-04
19	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	5.30E-04
20	GO:1900056: negative regulation of leaf senescence	5.30E-04
21	GO:0006364: rRNA processing	5.85E-04
22	GO:0010224: response to UV-B	6.05E-04
23	GO:0050821: protein stabilization	6.10E-04
24	GO:0031540: regulation of anthocyanin biosynthetic process	6.10E-04
25	GO:0001510: RNA methylation	6.94E-04
26	GO:0009626: plant-type hypersensitive response	7.30E-04
27	GO:0048354: mucilage biosynthetic process involved in seed coat development	8.68E-04
28	GO:0006412: translation	8.68E-04
29	GO:0010162: seed dormancy process	9.59E-04
30	GO:0002237: response to molecule of bacterial origin	1.35E-03
31	GO:0009266: response to temperature stimulus	1.35E-03
32	GO:0048467: gynoecium development	1.35E-03
33	GO:0000162: tryptophan biosynthetic process	1.56E-03
34	GO:0009863: salicylic acid mediated signaling pathway	1.67E-03
35	GO:0009944: polarity specification of adaxial/abaxial axis	1.67E-03
36	GO:0006334: nucleosome assembly	1.90E-03
37	GO:0016226: iron-sulfur cluster assembly	2.02E-03
38	GO:0009294: DNA mediated transformation	2.14E-03
39	GO:0009411: response to UV	2.14E-03
40	GO:0042391: regulation of membrane potential	2.52E-03
41	GO:0008033: tRNA processing	2.52E-03
42	GO:0006891: intra-Golgi vesicle-mediated transport	3.05E-03
43	GO:0006635: fatty acid beta-oxidation	3.05E-03
44	GO:0032502: developmental process	3.19E-03
45	GO:0046686: response to cadmium ion	3.79E-03
46	GO:0009615: response to virus	3.91E-03
47	GO:0008219: cell death	4.69E-03
48	GO:0008283: cell proliferation	6.57E-03
49	GO:0051707: response to other organism	6.57E-03
50	GO:0006486: protein glycosylation	8.08E-03
51	GO:0016569: covalent chromatin modification	9.92E-03
52	GO:0009845: seed germination	1.28E-02
53	GO:0006633: fatty acid biosynthetic process	1.42E-02
54	GO:0009617: response to bacterium	1.73E-02
55	GO:0042254: ribosome biogenesis	2.10E-02
56	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.48E-02
57	GO:0046777: protein autophosphorylation	2.54E-02
58	GO:0045454: cell redox homeostasis	2.75E-02
59	GO:0006886: intracellular protein transport	2.81E-02
60	GO:0032259: methylation	3.10E-02
61	GO:0009734: auxin-activated signaling pathway	4.07E-02

Rank	GO Term	Adjusted P value
1	GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	0.00E+00
2	GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity	0.00E+00
3	GO:0004164: diphthine synthase activity	0.00E+00
4	GO:0004048: anthranilate phosphoribosyltransferase activity	2.64E-05
5	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.64E-05
6	GO:1990259: histone-glutamine methyltransferase activity	2.64E-05
7	GO:0004338: glucan exo-1,3-beta-glucosidase activity	6.72E-05
8	GO:0004148: dihydrolipoyl dehydrogenase activity	1.18E-04
9	GO:0008649: rRNA methyltransferase activity	1.18E-04
10	GO:0003735: structural constituent of ribosome	1.46E-04
11	GO:0050897: cobalt ion binding	3.11E-04
12	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	3.78E-04
13	GO:0030976: thiamine pyrophosphate binding	3.78E-04
14	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.78E-04
15	GO:0030515: snoRNA binding	5.30E-04
16	GO:0005544: calcium-dependent phospholipid binding	6.10E-04
17	GO:0008378: galactosyltransferase activity	1.15E-03
18	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.35E-03
19	GO:0005507: copper ion binding	1.39E-03
20	GO:0030552: cAMP binding	1.45E-03
21	GO:0030553: cGMP binding	1.45E-03
22	GO:0004407: histone deacetylase activity	1.67E-03
23	GO:0005528: FK506 binding	1.67E-03
24	GO:0005216: ion channel activity	1.78E-03
25	GO:0008810: cellulase activity	2.14E-03
26	GO:0030551: cyclic nucleotide binding	2.52E-03
27	GO:0005249: voltage-gated potassium channel activity	2.52E-03
28	GO:0008237: metallopeptidase activity	3.62E-03
29	GO:0030247: polysaccharide binding	4.37E-03
30	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.69E-03
31	GO:0003746: translation elongation factor activity	5.52E-03
32	GO:0003697: single-stranded DNA binding	5.52E-03
33	GO:0042393: histone binding	6.04E-03
34	GO:0051537: 2 iron, 2 sulfur cluster binding	6.94E-03
35	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.31E-03
36	GO:0051287: NAD binding	7.50E-03
37	GO:0008026: ATP-dependent helicase activity	1.08E-02
38	GO:0016758: transferase activity, transferring hexosyl groups	1.19E-02
39	GO:0008565: protein transporter activity	1.38E-02
40	GO:0042802: identical protein binding	1.80E-02
41	GO:0008168: methyltransferase activity	2.02E-02
42	GO:0003729: mRNA binding	2.04E-02
43	GO:0050660: flavin adenine dinucleotide binding	2.30E-02
44	GO:0008233: peptidase activity	2.39E-02
45	GO:0003723: RNA binding	2.91E-02
46	GO:0009055: electron carrier activity	3.36E-02
47	GO:0016887: ATPase activity	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0005730: nucleolus	2.64E-08
2	GO:0005758: mitochondrial intermembrane space	4.95E-05
3	GO:0005840: ribosome	3.52E-04
4	GO:0031428: box C/D snoRNP complex	3.78E-04
5	GO:0015030: Cajal body	8.68E-04
6	GO:0005773: vacuole	8.97E-04
7	GO:0005740: mitochondrial envelope	9.59E-04
8	GO:0032040: small-subunit processome	1.15E-03
9	GO:0005759: mitochondrial matrix	1.26E-03
10	GO:0005795: Golgi stack	1.45E-03
11	GO:0070469: respiratory chain	1.78E-03
12	GO:0022627: cytosolic small ribosomal subunit	1.81E-03
13	GO:0015935: small ribosomal subunit	1.90E-03
14	GO:0005741: mitochondrial outer membrane	1.90E-03
15	GO:0022625: cytosolic large ribosomal subunit	2.73E-03
16	GO:0005739: mitochondrion	2.92E-03
17	GO:0005747: mitochondrial respiratory chain complex I	9.29E-03
18	GO:0005774: vacuolar membrane	1.04E-02
19	GO:0048046: apoplast	1.11E-02
20	GO:0009536: plastid	1.68E-02
21	GO:0046658: anchored component of plasma membrane	1.86E-02
22	GO:0005783: endoplasmic reticulum	2.54E-02
23	GO:0005743: mitochondrial inner membrane	3.03E-02
24	GO:0005886: plasma membrane	3.96E-02
25	GO:0005887: integral component of plasma membrane	3.97E-02
26	GO:0022626: cytosolic ribosome	4.65E-02