GO Enrichment Analysis of Co-expressed Genes with
AT2G45030
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071433: cell wall repair | 0.00E+00 |
| 2 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 3 | GO:0006457: protein folding | 2.72E-10 |
| 4 | GO:0046686: response to cadmium ion | 2.56E-07 |
| 5 | GO:0009651: response to salt stress | 4.54E-06 |
| 6 | GO:0000494: box C/D snoRNA 3'-end processing | 4.31E-05 |
| 7 | GO:0019510: S-adenosylhomocysteine catabolic process | 4.31E-05 |
| 8 | GO:1990258: histone glutamine methylation | 4.31E-05 |
| 9 | GO:0006913: nucleocytoplasmic transport | 4.36E-05 |
| 10 | GO:0006820: anion transport | 5.14E-05 |
| 11 | GO:0034976: response to endoplasmic reticulum stress | 8.92E-05 |
| 12 | GO:0033353: S-adenosylmethionine cycle | 1.07E-04 |
| 13 | GO:0015865: purine nucleotide transport | 1.07E-04 |
| 14 | GO:0045041: protein import into mitochondrial intermembrane space | 1.07E-04 |
| 15 | GO:0007005: mitochondrion organization | 1.37E-04 |
| 16 | GO:0055074: calcium ion homeostasis | 1.84E-04 |
| 17 | GO:0006954: inflammatory response | 1.84E-04 |
| 18 | GO:0006606: protein import into nucleus | 1.96E-04 |
| 19 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 2.70E-04 |
| 20 | GO:0046902: regulation of mitochondrial membrane permeability | 2.70E-04 |
| 21 | GO:0034440: lipid oxidation | 3.64E-04 |
| 22 | GO:0006346: methylation-dependent chromatin silencing | 3.64E-04 |
| 23 | GO:0033356: UDP-L-arabinose metabolic process | 3.64E-04 |
| 24 | GO:0031167: rRNA methylation | 4.63E-04 |
| 25 | GO:0006544: glycine metabolic process | 4.63E-04 |
| 26 | GO:0006563: L-serine metabolic process | 5.67E-04 |
| 27 | GO:0009423: chorismate biosynthetic process | 6.76E-04 |
| 28 | GO:0006458: 'de novo' protein folding | 6.76E-04 |
| 29 | GO:0080086: stamen filament development | 6.76E-04 |
| 30 | GO:0016444: somatic cell DNA recombination | 6.76E-04 |
| 31 | GO:1901001: negative regulation of response to salt stress | 6.76E-04 |
| 32 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 6.76E-04 |
| 33 | GO:0042026: protein refolding | 6.76E-04 |
| 34 | GO:0071669: plant-type cell wall organization or biogenesis | 7.90E-04 |
| 35 | GO:0009408: response to heat | 9.64E-04 |
| 36 | GO:0001510: RNA methylation | 1.03E-03 |
| 37 | GO:0006364: rRNA processing | 1.06E-03 |
| 38 | GO:0010112: regulation of systemic acquired resistance | 1.16E-03 |
| 39 | GO:0006189: 'de novo' IMP biosynthetic process | 1.16E-03 |
| 40 | GO:0006607: NLS-bearing protein import into nucleus | 1.16E-03 |
| 41 | GO:0098656: anion transmembrane transport | 1.16E-03 |
| 42 | GO:0035999: tetrahydrofolate interconversion | 1.29E-03 |
| 43 | GO:0016441: posttranscriptional gene silencing | 1.43E-03 |
| 44 | GO:0010162: seed dormancy process | 1.43E-03 |
| 45 | GO:0010072: primary shoot apical meristem specification | 1.57E-03 |
| 46 | GO:0009073: aromatic amino acid family biosynthetic process | 1.57E-03 |
| 47 | GO:0006626: protein targeting to mitochondrion | 1.87E-03 |
| 48 | GO:0010075: regulation of meristem growth | 1.87E-03 |
| 49 | GO:0009555: pollen development | 1.97E-03 |
| 50 | GO:0009934: regulation of meristem structural organization | 2.03E-03 |
| 51 | GO:0009901: anther dehiscence | 2.19E-03 |
| 52 | GO:0000162: tryptophan biosynthetic process | 2.36E-03 |
| 53 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.52E-03 |
| 54 | GO:0000027: ribosomal large subunit assembly | 2.52E-03 |
| 55 | GO:0030150: protein import into mitochondrial matrix | 2.52E-03 |
| 56 | GO:0009695: jasmonic acid biosynthetic process | 2.70E-03 |
| 57 | GO:0031408: oxylipin biosynthetic process | 2.88E-03 |
| 58 | GO:0006334: nucleosome assembly | 2.88E-03 |
| 59 | GO:0061077: chaperone-mediated protein folding | 2.88E-03 |
| 60 | GO:0009617: response to bacterium | 3.00E-03 |
| 61 | GO:0009793: embryo development ending in seed dormancy | 3.05E-03 |
| 62 | GO:0006730: one-carbon metabolic process | 3.06E-03 |
| 63 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.06E-03 |
| 64 | GO:0009294: DNA mediated transformation | 3.24E-03 |
| 65 | GO:0040007: growth | 3.24E-03 |
| 66 | GO:0009306: protein secretion | 3.43E-03 |
| 67 | GO:0008033: tRNA processing | 3.82E-03 |
| 68 | GO:0048653: anther development | 3.82E-03 |
| 69 | GO:0010197: polar nucleus fusion | 4.02E-03 |
| 70 | GO:0048868: pollen tube development | 4.02E-03 |
| 71 | GO:0010193: response to ozone | 4.64E-03 |
| 72 | GO:0080156: mitochondrial mRNA modification | 4.64E-03 |
| 73 | GO:0009567: double fertilization forming a zygote and endosperm | 5.30E-03 |
| 74 | GO:0009615: response to virus | 5.98E-03 |
| 75 | GO:0016049: cell growth | 6.94E-03 |
| 76 | GO:0030244: cellulose biosynthetic process | 7.19E-03 |
| 77 | GO:0010311: lateral root formation | 7.43E-03 |
| 78 | GO:0009832: plant-type cell wall biogenesis | 7.43E-03 |
| 79 | GO:0006811: ion transport | 7.69E-03 |
| 80 | GO:0006810: transport | 7.80E-03 |
| 81 | GO:0048527: lateral root development | 7.95E-03 |
| 82 | GO:0000724: double-strand break repair via homologous recombination | 8.21E-03 |
| 83 | GO:0008283: cell proliferation | 1.01E-02 |
| 84 | GO:0009735: response to cytokinin | 1.15E-02 |
| 85 | GO:0016569: covalent chromatin modification | 1.54E-02 |
| 86 | GO:0009553: embryo sac development | 1.57E-02 |
| 87 | GO:0055085: transmembrane transport | 1.60E-02 |
| 88 | GO:0009845: seed germination | 1.99E-02 |
| 89 | GO:0009451: RNA modification | 2.40E-02 |
| 90 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.56E-02 |
| 91 | GO:0006979: response to oxidative stress | 2.58E-02 |
| 92 | GO:0015031: protein transport | 3.25E-02 |
| 93 | GO:0009409: response to cold | 3.46E-02 |
| 94 | GO:0009723: response to ethylene | 3.58E-02 |
| 95 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.85E-02 |
| 96 | GO:0046777: protein autophosphorylation | 3.94E-02 |
| 97 | GO:0006952: defense response | 4.15E-02 |
| 98 | GO:0045454: cell redox homeostasis | 4.27E-02 |
| 99 | GO:0006886: intracellular protein transport | 4.37E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group | 0.00E+00 |
| 2 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 3 | GO:0051082: unfolded protein binding | 3.39E-13 |
| 4 | GO:0015288: porin activity | 1.51E-05 |
| 5 | GO:0008308: voltage-gated anion channel activity | 1.95E-05 |
| 6 | GO:0003746: translation elongation factor activity | 3.03E-05 |
| 7 | GO:1990259: histone-glutamine methyltransferase activity | 4.31E-05 |
| 8 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 4.31E-05 |
| 9 | GO:0004013: adenosylhomocysteinase activity | 4.31E-05 |
| 10 | GO:0004048: anthranilate phosphoribosyltransferase activity | 4.31E-05 |
| 11 | GO:0005507: copper ion binding | 6.32E-05 |
| 12 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 1.07E-04 |
| 13 | GO:0052691: UDP-arabinopyranose mutase activity | 1.07E-04 |
| 14 | GO:0008649: rRNA methyltransferase activity | 1.84E-04 |
| 15 | GO:0016165: linoleate 13S-lipoxygenase activity | 1.84E-04 |
| 16 | GO:0005524: ATP binding | 2.02E-04 |
| 17 | GO:0010178: IAA-amino acid conjugate hydrolase activity | 2.70E-04 |
| 18 | GO:0016866: intramolecular transferase activity | 3.64E-04 |
| 19 | GO:0004372: glycine hydroxymethyltransferase activity | 4.63E-04 |
| 20 | GO:0005471: ATP:ADP antiporter activity | 4.63E-04 |
| 21 | GO:0030515: snoRNA binding | 7.90E-04 |
| 22 | GO:0003723: RNA binding | 1.44E-03 |
| 23 | GO:0044183: protein binding involved in protein folding | 1.57E-03 |
| 24 | GO:0004129: cytochrome-c oxidase activity | 1.57E-03 |
| 25 | GO:0016887: ATPase activity | 1.66E-03 |
| 26 | GO:0008139: nuclear localization sequence binding | 1.87E-03 |
| 27 | GO:0031072: heat shock protein binding | 1.87E-03 |
| 28 | GO:0015266: protein channel activity | 1.87E-03 |
| 29 | GO:0008565: protein transporter activity | 2.19E-03 |
| 30 | GO:0004407: histone deacetylase activity | 2.52E-03 |
| 31 | GO:0004298: threonine-type endopeptidase activity | 2.88E-03 |
| 32 | GO:0004176: ATP-dependent peptidase activity | 2.88E-03 |
| 33 | GO:0004540: ribonuclease activity | 2.88E-03 |
| 34 | GO:0016760: cellulose synthase (UDP-forming) activity | 3.24E-03 |
| 35 | GO:0003756: protein disulfide isomerase activity | 3.43E-03 |
| 36 | GO:0005525: GTP binding | 3.69E-03 |
| 37 | GO:0008536: Ran GTPase binding | 4.02E-03 |
| 38 | GO:0016853: isomerase activity | 4.23E-03 |
| 39 | GO:0010181: FMN binding | 4.23E-03 |
| 40 | GO:0005509: calcium ion binding | 4.33E-03 |
| 41 | GO:0008237: metallopeptidase activity | 5.52E-03 |
| 42 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.69E-03 |
| 43 | GO:0008236: serine-type peptidase activity | 6.94E-03 |
| 44 | GO:0003924: GTPase activity | 7.08E-03 |
| 45 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.19E-03 |
| 46 | GO:0050897: cobalt ion binding | 7.95E-03 |
| 47 | GO:0003697: single-stranded DNA binding | 8.47E-03 |
| 48 | GO:0005515: protein binding | 9.24E-03 |
| 49 | GO:0042393: histone binding | 9.28E-03 |
| 50 | GO:0051287: NAD binding | 1.16E-02 |
| 51 | GO:0030246: carbohydrate binding | 1.70E-02 |
| 52 | GO:0030170: pyridoxal phosphate binding | 2.02E-02 |
| 53 | GO:0004252: serine-type endopeptidase activity | 2.02E-02 |
| 54 | GO:0046872: metal ion binding | 2.90E-02 |
| 55 | GO:0003682: chromatin binding | 3.35E-02 |
| 56 | GO:0008233: peptidase activity | 3.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005774: vacuolar membrane | 1.06E-14 |
| 2 | GO:0005788: endoplasmic reticulum lumen | 2.52E-09 |
| 3 | GO:0005739: mitochondrion | 1.07E-07 |
| 4 | GO:0005773: vacuole | 2.28E-07 |
| 5 | GO:0005730: nucleolus | 3.52E-07 |
| 6 | GO:0046930: pore complex | 1.95E-05 |
| 7 | GO:0005742: mitochondrial outer membrane translocase complex | 1.95E-05 |
| 8 | GO:0000138: Golgi trans cisterna | 4.31E-05 |
| 9 | GO:0005829: cytosol | 4.75E-05 |
| 10 | GO:0005783: endoplasmic reticulum | 5.37E-05 |
| 11 | GO:0005618: cell wall | 6.61E-05 |
| 12 | GO:0005635: nuclear envelope | 7.91E-05 |
| 13 | GO:0005741: mitochondrial outer membrane | 1.24E-04 |
| 14 | GO:0005886: plasma membrane | 1.50E-04 |
| 15 | GO:0005759: mitochondrial matrix | 2.27E-04 |
| 16 | GO:0009506: plasmodesma | 3.29E-04 |
| 17 | GO:0031428: box C/D snoRNP complex | 5.67E-04 |
| 18 | GO:0009507: chloroplast | 9.19E-04 |
| 19 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.03E-03 |
| 20 | GO:0009536: plastid | 1.17E-03 |
| 21 | GO:0005747: mitochondrial respiratory chain complex I | 1.28E-03 |
| 22 | GO:0015030: Cajal body | 1.29E-03 |
| 23 | GO:0005740: mitochondrial envelope | 1.43E-03 |
| 24 | GO:0032040: small-subunit processome | 1.72E-03 |
| 25 | GO:0005795: Golgi stack | 2.19E-03 |
| 26 | GO:0009941: chloroplast envelope | 2.22E-03 |
| 27 | GO:0005839: proteasome core complex | 2.88E-03 |
| 28 | GO:0009570: chloroplast stroma | 3.98E-03 |
| 29 | GO:0016592: mediator complex | 4.86E-03 |
| 30 | GO:0009505: plant-type cell wall | 6.38E-03 |
| 31 | GO:0005743: mitochondrial inner membrane | 6.58E-03 |
| 32 | GO:0005643: nuclear pore | 7.19E-03 |
| 33 | GO:0015934: large ribosomal subunit | 7.95E-03 |
| 34 | GO:0022626: cytosolic ribosome | 1.20E-02 |
| 35 | GO:0000502: proteasome complex | 1.25E-02 |
| 36 | GO:0005654: nucleoplasm | 1.84E-02 |
| 37 | GO:0005622: intracellular | 2.24E-02 |
| 38 | GO:0048046: apoplast | 2.46E-02 |