GO Enrichment Analysis of Co-expressed Genes with
AT2G44640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042255: ribosome assembly | 2.45E-06 |
| 2 | GO:0006353: DNA-templated transcription, termination | 2.45E-06 |
| 3 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.15E-06 |
| 4 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.33E-06 |
| 5 | GO:0006457: protein folding | 3.49E-05 |
| 6 | GO:0032502: developmental process | 6.11E-05 |
| 7 | GO:0009658: chloroplast organization | 6.22E-05 |
| 8 | GO:0006986: response to unfolded protein | 9.94E-05 |
| 9 | GO:0051085: chaperone mediated protein folding requiring cofactor | 9.94E-05 |
| 10 | GO:0015995: chlorophyll biosynthetic process | 1.04E-04 |
| 11 | GO:1901259: chloroplast rRNA processing | 2.68E-04 |
| 12 | GO:0006783: heme biosynthetic process | 4.68E-04 |
| 13 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 5.23E-04 |
| 14 | GO:0031425: chloroplast RNA processing | 5.23E-04 |
| 15 | GO:0045036: protein targeting to chloroplast | 5.78E-04 |
| 16 | GO:0009089: lysine biosynthetic process via diaminopimelate | 6.34E-04 |
| 17 | GO:0009073: aromatic amino acid family biosynthetic process | 6.34E-04 |
| 18 | GO:0008380: RNA splicing | 7.67E-04 |
| 19 | GO:0008033: tRNA processing | 1.49E-03 |
| 20 | GO:0016032: viral process | 1.88E-03 |
| 21 | GO:0010027: thylakoid membrane organization | 2.30E-03 |
| 22 | GO:0009735: response to cytokinin | 2.80E-03 |
| 23 | GO:0006364: rRNA processing | 4.69E-03 |
| 24 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.81E-03 |
| 25 | GO:0006412: translation | 6.29E-03 |
| 26 | GO:0009790: embryo development | 7.78E-03 |
| 27 | GO:0006633: fatty acid biosynthetic process | 8.19E-03 |
| 28 | GO:0009451: RNA modification | 8.88E-03 |
| 29 | GO:0080167: response to karrikin | 1.38E-02 |
| 30 | GO:0009793: embryo development ending in seed dormancy | 1.43E-02 |
| 31 | GO:0032259: methylation | 1.77E-02 |
| 32 | GO:0006397: mRNA processing | 1.88E-02 |
| 33 | GO:0006508: proteolysis | 1.90E-02 |
| 34 | GO:0009416: response to light stimulus | 2.74E-02 |
| 35 | GO:0006414: translational elongation | 3.65E-02 |
| 36 | GO:0042742: defense response to bacterium | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051082: unfolded protein binding | 1.30E-05 |
| 2 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 1.39E-05 |
| 3 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 1.39E-05 |
| 4 | GO:0004655: porphobilinogen synthase activity | 1.39E-05 |
| 5 | GO:0019843: rRNA binding | 1.89E-05 |
| 6 | GO:0051087: chaperone binding | 2.17E-05 |
| 7 | GO:0003727: single-stranded RNA binding | 3.34E-05 |
| 8 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 3.65E-05 |
| 9 | GO:0000774: adenyl-nucleotide exchange factor activity | 3.65E-05 |
| 10 | GO:0008483: transaminase activity | 7.58E-05 |
| 11 | GO:0016836: hydro-lyase activity | 1.37E-04 |
| 12 | GO:0003690: double-stranded DNA binding | 2.77E-04 |
| 13 | GO:0005507: copper ion binding | 5.14E-04 |
| 14 | GO:0030170: pyridoxal phosphate binding | 5.25E-04 |
| 15 | GO:0008266: poly(U) RNA binding | 8.13E-04 |
| 16 | GO:0000287: magnesium ion binding | 9.61E-04 |
| 17 | GO:0003735: structural constituent of ribosome | 1.86E-03 |
| 18 | GO:0003746: translation elongation factor activity | 3.22E-03 |
| 19 | GO:0004185: serine-type carboxypeptidase activity | 3.83E-03 |
| 20 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.26E-03 |
| 21 | GO:0003723: RNA binding | 1.05E-02 |
| 22 | GO:0008168: methyltransferase activity | 1.16E-02 |
| 23 | GO:0042803: protein homodimerization activity | 1.62E-02 |
| 24 | GO:0003924: GTPase activity | 1.82E-02 |
| 25 | GO:0004519: endonuclease activity | 1.94E-02 |
| 26 | GO:0016887: ATPase activity | 2.49E-02 |
| 27 | GO:0005525: GTP binding | 3.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 3.55E-18 |
| 2 | GO:0009507: chloroplast | 2.16E-14 |
| 3 | GO:0009579: thylakoid | 3.00E-08 |
| 4 | GO:0009547: plastid ribosome | 1.39E-05 |
| 5 | GO:0009941: chloroplast envelope | 1.51E-05 |
| 6 | GO:0005759: mitochondrial matrix | 5.92E-04 |
| 7 | GO:0000311: plastid large ribosomal subunit | 6.93E-04 |
| 8 | GO:0009508: plastid chromosome | 7.52E-04 |
| 9 | GO:0005840: ribosome | 8.44E-04 |
| 10 | GO:0042651: thylakoid membrane | 1.07E-03 |
| 11 | GO:0009532: plastid stroma | 1.13E-03 |
| 12 | GO:0009295: nucleoid | 2.13E-03 |
| 13 | GO:0030529: intracellular ribonucleoprotein complex | 2.30E-03 |
| 14 | GO:0009706: chloroplast inner membrane | 5.98E-03 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 6.99E-03 |
| 16 | GO:0005623: cell | 7.11E-03 |
| 17 | GO:0009505: plant-type cell wall | 7.71E-03 |
| 18 | GO:0022625: cytosolic large ribosomal subunit | 1.43E-02 |
| 19 | GO:0022626: cytosolic ribosome | 2.66E-02 |
| 20 | GO:0009534: chloroplast thylakoid | 3.14E-02 |
| 21 | GO:0016020: membrane | 3.82E-02 |
| 22 | GO:0005622: intracellular | 4.13E-02 |