Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G44500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
2GO:0080127: fruit septum development0.00E+00
3GO:0006792: regulation of sulfur utilization0.00E+00
4GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
5GO:0010200: response to chitin3.39E-09
6GO:0010411: xyloglucan metabolic process3.63E-07
7GO:0010438: cellular response to sulfur starvation3.07E-05
8GO:0009751: response to salicylic acid4.23E-05
9GO:0042546: cell wall biogenesis4.38E-05
10GO:0010439: regulation of glucosinolate biosynthetic process1.11E-04
11GO:0050691: regulation of defense response to virus by host1.54E-04
12GO:0033481: galacturonate biosynthetic process1.54E-04
13GO:0055063: sulfate ion homeostasis1.54E-04
14GO:0046500: S-adenosylmethionine metabolic process1.54E-04
15GO:0030154: cell differentiation2.18E-04
16GO:0071497: cellular response to freezing3.51E-04
17GO:0009718: anthocyanin-containing compound biosynthetic process3.67E-04
18GO:0006357: regulation of transcription from RNA polymerase II promoter5.29E-04
19GO:0005992: trehalose biosynthetic process5.74E-04
20GO:0080168: abscisic acid transport5.75E-04
21GO:0019419: sulfate reduction5.75E-04
22GO:0010581: regulation of starch biosynthetic process5.75E-04
23GO:2000022: regulation of jasmonic acid mediated signaling pathway7.56E-04
24GO:1902358: sulfate transmembrane transport8.23E-04
25GO:0019722: calcium-mediated signaling8.91E-04
26GO:0000271: polysaccharide biosynthetic process1.04E-03
27GO:0046345: abscisic acid catabolic process1.09E-03
28GO:0010600: regulation of auxin biosynthetic process1.09E-03
29GO:0009741: response to brassinosteroid1.11E-03
30GO:0045454: cell redox homeostasis1.21E-03
31GO:0006355: regulation of transcription, DNA-templated1.35E-03
32GO:2000762: regulation of phenylpropanoid metabolic process1.38E-03
33GO:0060776: simple leaf morphogenesis1.38E-03
34GO:0006544: glycine metabolic process1.38E-03
35GO:0009828: plant-type cell wall loosening1.64E-03
36GO:0060918: auxin transport1.70E-03
37GO:1900425: negative regulation of defense response to bacterium1.70E-03
38GO:0003006: developmental process involved in reproduction1.70E-03
39GO:0006563: L-serine metabolic process1.70E-03
40GO:0007267: cell-cell signaling1.74E-03
41GO:0009753: response to jasmonic acid1.84E-03
42GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.07E-03
43GO:0051510: regulation of unidimensional cell growth2.39E-03
44GO:0050829: defense response to Gram-negative bacterium2.39E-03
45GO:2000070: regulation of response to water deprivation2.77E-03
46GO:0030162: regulation of proteolysis2.77E-03
47GO:0070413: trehalose metabolism in response to stress2.77E-03
48GO:0044030: regulation of DNA methylation3.16E-03
49GO:2000031: regulation of salicylic acid mediated signaling pathway3.16E-03
50GO:0010099: regulation of photomorphogenesis3.16E-03
51GO:0051865: protein autoubiquitination3.58E-03
52GO:0048507: meristem development3.58E-03
53GO:0009826: unidimensional cell growth3.65E-03
54GO:0009638: phototropism4.01E-03
55GO:0035999: tetrahydrofolate interconversion4.01E-03
56GO:0000103: sulfate assimilation4.46E-03
57GO:0043069: negative regulation of programmed cell death4.46E-03
58GO:0009723: response to ethylene4.61E-03
59GO:1903507: negative regulation of nucleic acid-templated transcription4.92E-03
60GO:0000272: polysaccharide catabolic process4.92E-03
61GO:0010015: root morphogenesis4.92E-03
62GO:0000038: very long-chain fatty acid metabolic process4.92E-03
63GO:2000652: regulation of secondary cell wall biogenesis4.92E-03
64GO:0031347: regulation of defense response4.99E-03
65GO:0016024: CDP-diacylglycerol biosynthetic process5.41E-03
66GO:0010582: floral meristem determinacy5.41E-03
67GO:0009585: red, far-red light phototransduction5.56E-03
68GO:0018107: peptidyl-threonine phosphorylation5.91E-03
69GO:0006807: nitrogen compound metabolic process5.91E-03
70GO:0010540: basipetal auxin transport6.42E-03
71GO:0048467: gynoecium development6.42E-03
72GO:0034605: cellular response to heat6.42E-03
73GO:0010143: cutin biosynthetic process6.42E-03
74GO:0002237: response to molecule of bacterial origin6.42E-03
75GO:0016567: protein ubiquitination6.92E-03
76GO:0009969: xyloglucan biosynthetic process6.95E-03
77GO:0009225: nucleotide-sugar metabolic process6.95E-03
78GO:0034976: response to endoplasmic reticulum stress7.49E-03
79GO:0019344: cysteine biosynthetic process8.05E-03
80GO:0019953: sexual reproduction8.63E-03
81GO:0016998: cell wall macromolecule catabolic process9.22E-03
82GO:0010017: red or far-red light signaling pathway9.82E-03
83GO:0040007: growth1.04E-02
84GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.04E-02
85GO:0009306: protein secretion1.11E-02
86GO:0009414: response to water deprivation1.11E-02
87GO:0009737: response to abscisic acid1.14E-02
88GO:0071555: cell wall organization1.15E-02
89GO:0010087: phloem or xylem histogenesis1.24E-02
90GO:0048653: anther development1.24E-02
91GO:0009958: positive gravitropism1.31E-02
92GO:0010268: brassinosteroid homeostasis1.31E-02
93GO:0045489: pectin biosynthetic process1.31E-02
94GO:0007623: circadian rhythm1.37E-02
95GO:0009733: response to auxin1.37E-02
96GO:0009851: auxin biosynthetic process1.44E-02
97GO:0009791: post-embryonic development1.44E-02
98GO:0016132: brassinosteroid biosynthetic process1.52E-02
99GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.52E-02
100GO:0002229: defense response to oomycetes1.52E-02
101GO:0009739: response to gibberellin1.54E-02
102GO:0010583: response to cyclopentenone1.59E-02
103GO:0009738: abscisic acid-activated signaling pathway1.64E-02
104GO:0009639: response to red or far red light1.74E-02
105GO:0016125: sterol metabolic process1.74E-02
106GO:0019760: glucosinolate metabolic process1.74E-02
107GO:0006904: vesicle docking involved in exocytosis1.81E-02
108GO:0001666: response to hypoxia1.97E-02
109GO:0006351: transcription, DNA-templated2.11E-02
110GO:0048573: photoperiodism, flowering2.21E-02
111GO:0016311: dephosphorylation2.29E-02
112GO:0048767: root hair elongation2.46E-02
113GO:0010218: response to far red light2.55E-02
114GO:0048527: lateral root development2.64E-02
115GO:0016051: carbohydrate biosynthetic process2.81E-02
116GO:0046777: protein autophosphorylation2.82E-02
117GO:0042542: response to hydrogen peroxide3.27E-02
118GO:0010114: response to red light3.37E-02
119GO:0006855: drug transmembrane transport3.76E-02
120GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.86E-02
121GO:0006629: lipid metabolic process3.89E-02
122GO:0009664: plant-type cell wall organization3.96E-02
123GO:0006486: protein glycosylation4.17E-02
124GO:0009873: ethylene-activated signaling pathway4.99E-02
RankGO TermAdjusted P value
1GO:0047890: flavanone 4-reductase activity0.00E+00
2GO:0045552: dihydrokaempferol 4-reductase activity0.00E+00
3GO:0043565: sequence-specific DNA binding2.29E-06
4GO:0016762: xyloglucan:xyloglucosyl transferase activity3.85E-06
5GO:0016798: hydrolase activity, acting on glycosyl bonds1.22E-05
6GO:0080132: fatty acid alpha-hydroxylase activity1.54E-04
7GO:0090440: abscisic acid transporter activity1.54E-04
8GO:0044212: transcription regulatory region DNA binding1.76E-04
9GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.12E-04
10GO:0004805: trehalose-phosphatase activity2.40E-04
11GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.61E-04
12GO:0009973: adenylyl-sulfate reductase activity3.51E-04
13GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity3.51E-04
14GO:0033741: adenylyl-sulfate reductase (glutathione) activity3.51E-04
15GO:0050736: O-malonyltransferase activity3.51E-04
16GO:0003700: transcription factor activity, sequence-specific DNA binding4.73E-04
17GO:0010295: (+)-abscisic acid 8'-hydroxylase activity5.75E-04
18GO:0033843: xyloglucan 6-xylosyltransferase activity8.23E-04
19GO:0050378: UDP-glucuronate 4-epimerase activity1.09E-03
20GO:0004372: glycine hydroxymethyltransferase activity1.38E-03
21GO:0002020: protease binding1.38E-03
22GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.43E-03
23GO:0016791: phosphatase activity1.64E-03
24GO:0035252: UDP-xylosyltransferase activity1.70E-03
25GO:0010427: abscisic acid binding1.70E-03
26GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.70E-03
27GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.70E-03
28GO:0016161: beta-amylase activity2.03E-03
29GO:0008271: secondary active sulfate transmembrane transporter activity3.16E-03
30GO:0004864: protein phosphatase inhibitor activity4.46E-03
31GO:0004842: ubiquitin-protein transferase activity5.35E-03
32GO:0015116: sulfate transmembrane transporter activity5.41E-03
33GO:0031625: ubiquitin protein ligase binding6.15E-03
34GO:0003712: transcription cofactor activity6.95E-03
35GO:0008134: transcription factor binding8.05E-03
36GO:0003714: transcription corepressor activity8.05E-03
37GO:0016758: transferase activity, transferring hexosyl groups9.65E-03
38GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity9.82E-03
39GO:0003756: protein disulfide isomerase activity1.11E-02
40GO:0004402: histone acetyltransferase activity1.24E-02
41GO:0001085: RNA polymerase II transcription factor binding1.31E-02
42GO:0050662: coenzyme binding1.37E-02
43GO:0004872: receptor activity1.44E-02
44GO:0003677: DNA binding1.61E-02
45GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.66E-02
46GO:0004672: protein kinase activity2.05E-02
47GO:0004806: triglyceride lipase activity2.21E-02
48GO:0015238: drug transmembrane transporter activity2.46E-02
49GO:0030246: carbohydrate binding2.48E-02
50GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.64E-02
51GO:0004871: signal transducer activity3.31E-02
52GO:0043621: protein self-association3.56E-02
53GO:0015293: symporter activity3.66E-02
54GO:0009055: electron carrier activity4.16E-02
55GO:0016298: lipase activity4.27E-02
56GO:0004674: protein serine/threonine kinase activity4.64E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0048046: apoplast3.16E-04
3GO:0042406: extrinsic component of endoplasmic reticulum membrane5.75E-04
4GO:0005615: extracellular space2.54E-03
5GO:0005618: cell wall3.91E-03
6GO:0005770: late endosome1.31E-02
7GO:0009505: plant-type cell wall1.62E-02
8GO:0032580: Golgi cisterna membrane1.74E-02
9GO:0005667: transcription factor complex2.13E-02
10GO:0005576: extracellular region2.33E-02
11GO:0019005: SCF ubiquitin ligase complex2.38E-02
12GO:0031902: late endosome membrane3.18E-02
13GO:0005794: Golgi apparatus4.13E-02
Gene type



Gene DE type