co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G44490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032497: detection of lipopolysaccharide	0.00E+00
2	GO:0019484: beta-alanine catabolic process	0.00E+00
3	GO:0010730: negative regulation of hydrogen peroxide biosynthetic process	0.00E+00
4	GO:0005997: xylulose metabolic process	0.00E+00
5	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
6	GO:0051928: positive regulation of calcium ion transport	0.00E+00
7	GO:0006105: succinate metabolic process	0.00E+00
8	GO:0043171: peptide catabolic process	0.00E+00
9	GO:0042906: xanthine transport	0.00E+00
10	GO:0009415: response to water	5.79E-06
11	GO:0006020: inositol metabolic process	2.63E-05
12	GO:0009819: drought recovery	2.52E-04
13	GO:0048544: recognition of pollen	2.54E-04
14	GO:0009865: pollen tube adhesion	2.65E-04
15	GO:0006540: glutamate decarboxylation to succinate	2.65E-04
16	GO:0035494: SNARE complex disassembly	2.65E-04
17	GO:0032958: inositol phosphate biosynthetic process	2.65E-04
18	GO:0009450: gamma-aminobutyric acid catabolic process	2.65E-04
19	GO:1900060: negative regulation of ceramide biosynthetic process	2.65E-04
20	GO:1990641: response to iron ion starvation	2.65E-04
21	GO:1902265: abscisic acid homeostasis	2.65E-04
22	GO:0006979: response to oxidative stress	3.06E-04
23	GO:0030003: cellular cation homeostasis	5.83E-04
24	GO:0006101: citrate metabolic process	5.83E-04
25	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	5.83E-04
26	GO:0090156: cellular sphingolipid homeostasis	5.83E-04
27	GO:0015720: allantoin transport	5.83E-04
28	GO:0010033: response to organic substance	5.83E-04
29	GO:0015857: uracil transport	5.83E-04
30	GO:0009737: response to abscisic acid	6.30E-04
31	GO:0009817: defense response to fungus, incompatible interaction	6.98E-04
32	GO:0009651: response to salt stress	7.29E-04
33	GO:0006954: inflammatory response	9.47E-04
34	GO:0071705: nitrogen compound transport	9.47E-04
35	GO:0030029: actin filament-based process	9.47E-04
36	GO:0035556: intracellular signal transduction	9.99E-04
37	GO:0009113: purine nucleobase biosynthetic process	1.35E-03
38	GO:1901332: negative regulation of lateral root development	1.35E-03
39	GO:0019438: aromatic compound biosynthetic process	1.35E-03
40	GO:0010601: positive regulation of auxin biosynthetic process	1.35E-03
41	GO:0015749: monosaccharide transport	1.35E-03
42	GO:0009269: response to desiccation	1.44E-03
43	GO:0006646: phosphatidylethanolamine biosynthetic process	1.81E-03
44	GO:0010222: stem vascular tissue pattern formation	1.81E-03
45	GO:0009687: abscisic acid metabolic process	1.81E-03
46	GO:0015743: malate transport	1.81E-03
47	GO:0006536: glutamate metabolic process	1.81E-03
48	GO:0010600: regulation of auxin biosynthetic process	1.81E-03
49	GO:0009409: response to cold	2.08E-03
50	GO:0043097: pyrimidine nucleoside salvage	2.31E-03
51	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.31E-03
52	GO:0000380: alternative mRNA splicing, via spliceosome	2.31E-03
53	GO:0000741: karyogamy	2.85E-03
54	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.85E-03
55	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.85E-03
56	GO:0042732: D-xylose metabolic process	2.85E-03
57	GO:0006206: pyrimidine nucleobase metabolic process	2.85E-03
58	GO:0006635: fatty acid beta-oxidation	2.90E-03
59	GO:0045926: negative regulation of growth	3.43E-03
60	GO:0006694: steroid biosynthetic process	3.43E-03
61	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.43E-03
62	GO:0071470: cellular response to osmotic stress	3.43E-03
63	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.43E-03
64	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.43E-03
65	GO:0010286: heat acclimation	3.73E-03
66	GO:0006333: chromatin assembly or disassembly	4.04E-03
67	GO:0010044: response to aluminum ion	4.04E-03
68	GO:0098869: cellular oxidant detoxification	4.04E-03
69	GO:0048437: floral organ development	4.04E-03
70	GO:0009396: folic acid-containing compound biosynthetic process	4.04E-03
71	GO:0006102: isocitrate metabolic process	4.69E-03
72	GO:0009061: anaerobic respiration	4.69E-03
73	GO:0010928: regulation of auxin mediated signaling pathway	4.69E-03
74	GO:0006491: N-glycan processing	4.69E-03
75	GO:0007165: signal transduction	5.30E-03
76	GO:0006972: hyperosmotic response	5.37E-03
77	GO:0001510: RNA methylation	5.37E-03
78	GO:0006811: ion transport	6.03E-03
79	GO:0034765: regulation of ion transmembrane transport	6.09E-03
80	GO:0046916: cellular transition metal ion homeostasis	6.09E-03
81	GO:0006098: pentose-phosphate shunt	6.09E-03
82	GO:0010043: response to zinc ion	6.32E-03
83	GO:0009631: cold acclimation	6.32E-03
84	GO:0008202: steroid metabolic process	6.83E-03
85	GO:0035999: tetrahydrofolate interconversion	6.83E-03
86	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.83E-03
87	GO:0045087: innate immune response	6.93E-03
88	GO:0006099: tricarboxylic acid cycle	7.24E-03
89	GO:0010468: regulation of gene expression	7.36E-03
90	GO:0016310: phosphorylation	7.54E-03
91	GO:0055062: phosphate ion homeostasis	7.61E-03
92	GO:0030148: sphingolipid biosynthetic process	8.42E-03
93	GO:0006816: calcium ion transport	8.42E-03
94	GO:0016925: protein sumoylation	9.26E-03
95	GO:0006807: nitrogen compound metabolic process	1.01E-02
96	GO:0000165: MAPK cascade	1.08E-02
97	GO:0007034: vacuolar transport	1.10E-02
98	GO:0006541: glutamine metabolic process	1.10E-02
99	GO:0006970: response to osmotic stress	1.13E-02
100	GO:0009414: response to water deprivation	1.14E-02
101	GO:0042742: defense response to bacterium	1.18E-02
102	GO:0019853: L-ascorbic acid biosynthetic process	1.20E-02
103	GO:0010030: positive regulation of seed germination	1.20E-02
104	GO:0005985: sucrose metabolic process	1.20E-02
105	GO:0006813: potassium ion transport	1.21E-02
106	GO:0051603: proteolysis involved in cellular protein catabolic process	1.25E-02
107	GO:0034976: response to endoplasmic reticulum stress	1.29E-02
108	GO:0009695: jasmonic acid biosynthetic process	1.49E-02
109	GO:0016575: histone deacetylation	1.49E-02
110	GO:0006874: cellular calcium ion homeostasis	1.49E-02
111	GO:0044550: secondary metabolite biosynthetic process	1.50E-02
112	GO:0019748: secondary metabolic process	1.70E-02
113	GO:0006012: galactose metabolic process	1.81E-02
114	GO:0009693: ethylene biosynthetic process	1.81E-02
115	GO:0071215: cellular response to abscisic acid stimulus	1.81E-02
116	GO:0048443: stamen development	1.92E-02
117	GO:0055114: oxidation-reduction process	2.00E-02
118	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.03E-02
119	GO:0006511: ubiquitin-dependent protein catabolic process	2.04E-02
120	GO:0042391: regulation of membrane potential	2.15E-02
121	GO:0080022: primary root development	2.15E-02
122	GO:0010051: xylem and phloem pattern formation	2.15E-02
123	GO:0015991: ATP hydrolysis coupled proton transport	2.15E-02
124	GO:0042631: cellular response to water deprivation	2.15E-02
125	GO:0000226: microtubule cytoskeleton organization	2.15E-02
126	GO:0006520: cellular amino acid metabolic process	2.26E-02
127	GO:0010197: polar nucleus fusion	2.26E-02
128	GO:0046323: glucose import	2.26E-02
129	GO:0009960: endosperm development	2.26E-02
130	GO:0071472: cellular response to salt stress	2.26E-02
131	GO:0010154: fruit development	2.26E-02
132	GO:0061025: membrane fusion	2.38E-02
133	GO:0006814: sodium ion transport	2.38E-02
134	GO:0009646: response to absence of light	2.38E-02
135	GO:0008654: phospholipid biosynthetic process	2.51E-02
136	GO:0009556: microsporogenesis	2.51E-02
137	GO:0010183: pollen tube guidance	2.51E-02
138	GO:0007623: circadian rhythm	2.98E-02
139	GO:0016567: protein ubiquitination	3.08E-02
140	GO:0001666: response to hypoxia	3.42E-02
141	GO:0016126: sterol biosynthetic process	3.42E-02
142	GO:0009911: positive regulation of flower development	3.42E-02
143	GO:0010029: regulation of seed germination	3.56E-02
144	GO:0006468: protein phosphorylation	3.69E-02
145	GO:0048573: photoperiodism, flowering	3.84E-02
146	GO:0006950: response to stress	3.84E-02
147	GO:0018298: protein-chromophore linkage	4.13E-02
148	GO:0009738: abscisic acid-activated signaling pathway	4.32E-02
149	GO:0016051: carbohydrate biosynthetic process	4.88E-02
150	GO:0009637: response to blue light	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
2	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
3	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
4	GO:0005272: sodium channel activity	0.00E+00
5	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
6	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
7	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
8	GO:0009045: xylose isomerase activity	0.00E+00
9	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
10	GO:0050897: cobalt ion binding	8.94E-05
11	GO:0016301: kinase activity	2.32E-04
12	GO:0070006: metalloaminopeptidase activity	2.65E-04
13	GO:0005244: voltage-gated ion channel activity	2.65E-04
14	GO:0030275: LRR domain binding	2.65E-04
15	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	2.65E-04
16	GO:0009679: hexose:proton symporter activity	2.65E-04
17	GO:0035671: enone reductase activity	2.65E-04
18	GO:0000829: inositol heptakisphosphate kinase activity	2.65E-04
19	GO:0010013: N-1-naphthylphthalamic acid binding	2.65E-04
20	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	2.65E-04
21	GO:0046870: cadmium ion binding	2.65E-04
22	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.65E-04
23	GO:0000828: inositol hexakisphosphate kinase activity	2.65E-04
24	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	2.65E-04
25	GO:0003867: 4-aminobutyrate transaminase activity	2.65E-04
26	GO:0004856: xylulokinase activity	2.65E-04
27	GO:0005267: potassium channel activity	3.10E-04
28	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	5.83E-04
29	GO:0004329: formate-tetrahydrofolate ligase activity	5.83E-04
30	GO:0001047: core promoter binding	5.83E-04
31	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	5.83E-04
32	GO:0032791: lead ion binding	5.83E-04
33	GO:0005274: allantoin uptake transmembrane transporter activity	5.83E-04
34	GO:0004609: phosphatidylserine decarboxylase activity	5.83E-04
35	GO:0047216: inositol 3-alpha-galactosyltransferase activity	5.83E-04
36	GO:0003994: aconitate hydratase activity	5.83E-04
37	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	5.83E-04
38	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	5.83E-04
39	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	5.83E-04
40	GO:0004839: ubiquitin activating enzyme activity	5.83E-04
41	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	5.83E-04
42	GO:0004352: glutamate dehydrogenase (NAD+) activity	5.83E-04
43	GO:0004177: aminopeptidase activity	5.99E-04
44	GO:0005483: soluble NSF attachment protein activity	9.47E-04
45	GO:0019948: SUMO activating enzyme activity	9.47E-04
46	GO:0017150: tRNA dihydrouridine synthase activity	9.47E-04
47	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	9.47E-04
48	GO:0004108: citrate (Si)-synthase activity	1.35E-03
49	GO:0030527: structural constituent of chromatin	1.35E-03
50	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.35E-03
51	GO:0004300: enoyl-CoA hydratase activity	1.35E-03
52	GO:0048027: mRNA 5'-UTR binding	1.35E-03
53	GO:0004707: MAP kinase activity	1.44E-03
54	GO:0005253: anion channel activity	1.81E-03
55	GO:0042277: peptide binding	1.81E-03
56	GO:0004737: pyruvate decarboxylase activity	1.81E-03
57	GO:0019905: syntaxin binding	1.81E-03
58	GO:0015210: uracil transmembrane transporter activity	1.81E-03
59	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	2.31E-03
60	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	2.31E-03
61	GO:0010294: abscisic acid glucosyltransferase activity	2.31E-03
62	GO:0015145: monosaccharide transmembrane transporter activity	2.31E-03
63	GO:0008641: small protein activating enzyme activity	2.31E-03
64	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.31E-03
65	GO:0030976: thiamine pyrophosphate binding	2.85E-03
66	GO:0004629: phospholipase C activity	2.85E-03
67	GO:0000293: ferric-chelate reductase activity	2.85E-03
68	GO:0004849: uridine kinase activity	3.43E-03
69	GO:0004602: glutathione peroxidase activity	3.43E-03
70	GO:0004435: phosphatidylinositol phospholipase C activity	3.43E-03
71	GO:0070300: phosphatidic acid binding	3.43E-03
72	GO:0005261: cation channel activity	3.43E-03
73	GO:0016831: carboxy-lyase activity	4.04E-03
74	GO:0009881: photoreceptor activity	4.04E-03
75	GO:0015140: malate transmembrane transporter activity	4.04E-03
76	GO:0004033: aldo-keto reductase (NADP) activity	4.69E-03
77	GO:0004869: cysteine-type endopeptidase inhibitor activity	4.69E-03
78	GO:0004525: ribonuclease III activity	4.69E-03
79	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	5.37E-03
80	GO:0005351: sugar:proton symporter activity	5.71E-03
81	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	6.09E-03
82	GO:0005524: ATP binding	6.09E-03
83	GO:0005507: copper ion binding	6.42E-03
84	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.83E-03
85	GO:0008171: O-methyltransferase activity	7.61E-03
86	GO:0004672: protein kinase activity	7.69E-03
87	GO:0008081: phosphoric diester hydrolase activity	1.01E-02
88	GO:0005262: calcium channel activity	1.01E-02
89	GO:0005217: intracellular ligand-gated ion channel activity	1.20E-02
90	GO:0004970: ionotropic glutamate receptor activity	1.20E-02
91	GO:0030552: cAMP binding	1.20E-02
92	GO:0030553: cGMP binding	1.20E-02
93	GO:0031625: ubiquitin protein ligase binding	1.34E-02
94	GO:0051536: iron-sulfur cluster binding	1.39E-02
95	GO:0004407: histone deacetylase activity	1.39E-02
96	GO:0043424: protein histidine kinase binding	1.49E-02
97	GO:0005216: ion channel activity	1.49E-02
98	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.59E-02
99	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.87E-02
100	GO:0030246: carbohydrate binding	2.01E-02
101	GO:0004842: ubiquitin-protein transferase activity	2.06E-02
102	GO:0005249: voltage-gated potassium channel activity	2.15E-02
103	GO:0030551: cyclic nucleotide binding	2.15E-02
104	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.22E-02
105	GO:0015144: carbohydrate transmembrane transporter activity	2.59E-02
106	GO:0004197: cysteine-type endopeptidase activity	2.76E-02
107	GO:0005200: structural constituent of cytoskeleton	3.15E-02
108	GO:0004674: protein serine/threonine kinase activity	3.23E-02
109	GO:0005509: calcium ion binding	3.26E-02
110	GO:0030247: polysaccharide binding	3.84E-02
111	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.98E-02
112	GO:0005215: transporter activity	4.23E-02
113	GO:0005096: GTPase activator activity	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	2.08E-04
2	GO:0035339: SPOTS complex	2.65E-04
3	GO:0005886: plasma membrane	2.87E-04
4	GO:0005829: cytosol	1.27E-03
5	GO:0000323: lytic vacuole	1.35E-03
6	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.81E-03
7	GO:0005851: eukaryotic translation initiation factor 2B complex	2.85E-03
8	GO:0000815: ESCRT III complex	3.43E-03
9	GO:0005777: peroxisome	4.40E-03
10	GO:0009705: plant-type vacuole membrane	5.88E-03
11	GO:0031090: organelle membrane	6.09E-03
12	GO:0005773: vacuole	6.55E-03
13	GO:0005764: lysosome	1.10E-02
14	GO:0005783: endoplasmic reticulum	1.30E-02
15	GO:0031965: nuclear membrane	2.51E-02
16	GO:0005737: cytoplasm	2.68E-02
17	GO:0000785: chromatin	2.76E-02
18	GO:0009506: plasmodesma	2.89E-02
19	GO:0000786: nucleosome	4.73E-02