Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G44230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0060416: response to growth hormone0.00E+00
2GO:0007638: mechanosensory behavior0.00E+00
3GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
4GO:0090393: sepal giant cell development0.00E+00
5GO:0033494: ferulate metabolic process0.00E+00
6GO:0006833: water transport7.43E-06
7GO:0010411: xyloglucan metabolic process1.22E-05
8GO:0006810: transport2.57E-05
9GO:0034220: ion transmembrane transport3.44E-05
10GO:0006546: glycine catabolic process9.33E-05
11GO:0006749: glutathione metabolic process9.33E-05
12GO:0010037: response to carbon dioxide9.33E-05
13GO:0015976: carbon utilization9.33E-05
14GO:2000122: negative regulation of stomatal complex development9.33E-05
15GO:0045490: pectin catabolic process9.75E-05
16GO:0010442: guard cell morphogenesis3.94E-04
17GO:0071370: cellular response to gibberellin stimulus3.94E-04
18GO:0006723: cuticle hydrocarbon biosynthetic process3.94E-04
19GO:1901599: (-)-pinoresinol biosynthetic process3.94E-04
20GO:0042335: cuticle development4.50E-04
21GO:0007155: cell adhesion4.53E-04
22GO:0042546: cell wall biogenesis4.62E-04
23GO:0071554: cell wall organization or biogenesis6.51E-04
24GO:0010583: response to cyclopentenone7.07E-04
25GO:0015786: UDP-glucose transport8.55E-04
26GO:0060919: auxin influx8.55E-04
27GO:0080148: negative regulation of response to water deprivation8.55E-04
28GO:0080151: positive regulation of salicylic acid mediated signaling pathway8.55E-04
29GO:0030388: fructose 1,6-bisphosphate metabolic process8.55E-04
30GO:2000123: positive regulation of stomatal complex development8.55E-04
31GO:0052541: plant-type cell wall cellulose metabolic process8.55E-04
32GO:0006695: cholesterol biosynthetic process8.55E-04
33GO:0007267: cell-cell signaling8.95E-04
34GO:0016126: sterol biosynthetic process1.03E-03
35GO:0009773: photosynthetic electron transport in photosystem I1.05E-03
36GO:0000038: very long-chain fatty acid metabolic process1.05E-03
37GO:0042545: cell wall modification1.12E-03
38GO:0071555: cell wall organization1.28E-03
39GO:0043447: alkane biosynthetic process1.39E-03
40GO:0015840: urea transport1.39E-03
41GO:0006696: ergosterol biosynthetic process1.39E-03
42GO:0015783: GDP-fucose transport1.39E-03
43GO:0090506: axillary shoot meristem initiation1.39E-03
44GO:0033591: response to L-ascorbic acid1.39E-03
45GO:0006000: fructose metabolic process1.39E-03
46GO:0019253: reductive pentose-phosphate cycle1.53E-03
47GO:0009407: toxin catabolic process1.63E-03
48GO:0010119: regulation of stomatal movement1.74E-03
49GO:0080167: response to karrikin1.79E-03
50GO:0010025: wax biosynthetic process1.91E-03
51GO:0016051: carbohydrate biosynthetic process1.95E-03
52GO:0051016: barbed-end actin filament capping2.00E-03
53GO:0006165: nucleoside diphosphate phosphorylation2.00E-03
54GO:0006228: UTP biosynthetic process2.00E-03
55GO:0006168: adenine salvage2.00E-03
56GO:0032877: positive regulation of DNA endoreduplication2.00E-03
57GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.00E-03
58GO:0006166: purine ribonucleoside salvage2.00E-03
59GO:0007231: osmosensory signaling pathway2.00E-03
60GO:0006241: CTP biosynthetic process2.00E-03
61GO:0072334: UDP-galactose transmembrane transport2.00E-03
62GO:0080170: hydrogen peroxide transmembrane transport2.00E-03
63GO:0019344: cysteine biosynthetic process2.12E-03
64GO:0006633: fatty acid biosynthetic process2.34E-03
65GO:0006542: glutamine biosynthetic process2.69E-03
66GO:0019676: ammonia assimilation cycle2.69E-03
67GO:0019464: glycine decarboxylation via glycine cleavage system2.69E-03
68GO:0009765: photosynthesis, light harvesting2.69E-03
69GO:0006085: acetyl-CoA biosynthetic process2.69E-03
70GO:0006183: GTP biosynthetic process2.69E-03
71GO:0033500: carbohydrate homeostasis2.69E-03
72GO:0031122: cytoplasmic microtubule organization2.69E-03
73GO:2000038: regulation of stomatal complex development2.69E-03
74GO:0009416: response to light stimulus2.89E-03
75GO:0009636: response to toxic substance3.13E-03
76GO:0019722: calcium-mediated signaling3.33E-03
77GO:0016120: carotene biosynthetic process3.44E-03
78GO:0006656: phosphatidylcholine biosynthetic process3.44E-03
79GO:0016123: xanthophyll biosynthetic process3.44E-03
80GO:0044209: AMP salvage3.44E-03
81GO:0032876: negative regulation of DNA endoreduplication3.44E-03
82GO:0010375: stomatal complex patterning3.44E-03
83GO:0046785: microtubule polymerization3.44E-03
84GO:0016117: carotenoid biosynthetic process3.62E-03
85GO:0000271: polysaccharide biosynthetic process3.91E-03
86GO:0045489: pectin biosynthetic process4.21E-03
87GO:0010190: cytochrome b6f complex assembly4.26E-03
88GO:0016554: cytidine to uridine editing4.26E-03
89GO:0055085: transmembrane transport4.63E-03
90GO:0009612: response to mechanical stimulus5.13E-03
91GO:0010067: procambium histogenesis5.13E-03
92GO:0010555: response to mannitol5.13E-03
93GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity5.13E-03
94GO:0042372: phylloquinone biosynthetic process5.13E-03
95GO:0045926: negative regulation of growth5.13E-03
96GO:0009645: response to low light intensity stimulus6.06E-03
97GO:0050790: regulation of catalytic activity6.06E-03
98GO:0030497: fatty acid elongation6.06E-03
99GO:0009642: response to light intensity7.05E-03
100GO:0009850: auxin metabolic process7.05E-03
101GO:0009704: de-etiolation7.05E-03
102GO:0045010: actin nucleation7.05E-03
103GO:0006402: mRNA catabolic process7.05E-03
104GO:0008610: lipid biosynthetic process7.05E-03
105GO:0009657: plastid organization8.09E-03
106GO:0007389: pattern specification process8.09E-03
107GO:0017004: cytochrome complex assembly8.09E-03
108GO:0009932: cell tip growth8.09E-03
109GO:0006002: fructose 6-phosphate metabolic process8.09E-03
110GO:0045337: farnesyl diphosphate biosynthetic process9.18E-03
111GO:0033384: geranyl diphosphate biosynthetic process9.18E-03
112GO:0006754: ATP biosynthetic process9.18E-03
113GO:0048589: developmental growth9.18E-03
114GO:0000902: cell morphogenesis9.18E-03
115GO:0010206: photosystem II repair9.18E-03
116GO:0009817: defense response to fungus, incompatible interaction9.86E-03
117GO:1900865: chloroplast RNA modification1.03E-02
118GO:0016573: histone acetylation1.03E-02
119GO:0009870: defense response signaling pathway, resistance gene-dependent1.15E-02
120GO:0006535: cysteine biosynthetic process from serine1.15E-02
121GO:0019538: protein metabolic process1.15E-02
122GO:0043069: negative regulation of programmed cell death1.15E-02
123GO:0048829: root cap development1.15E-02
124GO:1903507: negative regulation of nucleic acid-templated transcription1.28E-02
125GO:0006415: translational termination1.28E-02
126GO:0009807: lignan biosynthetic process1.28E-02
127GO:0019684: photosynthesis, light reaction1.28E-02
128GO:0006816: calcium ion transport1.28E-02
129GO:0009089: lysine biosynthetic process via diaminopimelate1.28E-02
130GO:0006790: sulfur compound metabolic process1.41E-02
131GO:0006631: fatty acid metabolic process1.49E-02
132GO:2000028: regulation of photoperiodism, flowering1.54E-02
133GO:0030036: actin cytoskeleton organization1.54E-02
134GO:0050826: response to freezing1.54E-02
135GO:0009725: response to hormone1.54E-02
136GO:0006094: gluconeogenesis1.54E-02
137GO:0009767: photosynthetic electron transport chain1.54E-02
138GO:0005986: sucrose biosynthetic process1.54E-02
139GO:0010020: chloroplast fission1.68E-02
140GO:0010223: secondary shoot formation1.68E-02
141GO:0010143: cutin biosynthetic process1.68E-02
142GO:0006508: proteolysis1.79E-02
143GO:0005985: sucrose metabolic process1.82E-02
144GO:0070588: calcium ion transmembrane transport1.82E-02
145GO:0046854: phosphatidylinositol phosphorylation1.82E-02
146GO:0009969: xyloglucan biosynthetic process1.82E-02
147GO:0009825: multidimensional cell growth1.82E-02
148GO:0006636: unsaturated fatty acid biosynthetic process1.96E-02
149GO:0009833: plant-type primary cell wall biogenesis1.96E-02
150GO:0006071: glycerol metabolic process1.96E-02
151GO:0006338: chromatin remodeling2.11E-02
152GO:0007010: cytoskeleton organization2.11E-02
153GO:0051603: proteolysis involved in cellular protein catabolic process2.26E-02
154GO:0010026: trichome differentiation2.27E-02
155GO:0009768: photosynthesis, light harvesting in photosystem I2.27E-02
156GO:0007017: microtubule-based process2.27E-02
157GO:0003333: amino acid transmembrane transport2.43E-02
158GO:0061077: chaperone-mediated protein folding2.43E-02
159GO:0005975: carbohydrate metabolic process2.55E-02
160GO:2000022: regulation of jasmonic acid mediated signaling pathway2.59E-02
161GO:0080092: regulation of pollen tube growth2.59E-02
162GO:0019748: secondary metabolic process2.59E-02
163GO:0009735: response to cytokinin2.72E-02
164GO:0009294: DNA mediated transformation2.75E-02
165GO:0001944: vasculature development2.75E-02
166GO:0006284: base-excision repair2.92E-02
167GO:0010089: xylem development2.92E-02
168GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.96E-02
169GO:0046777: protein autophosphorylation3.09E-02
170GO:0042742: defense response to bacterium3.23E-02
171GO:0080022: primary root development3.27E-02
172GO:0000413: protein peptidyl-prolyl isomerization3.27E-02
173GO:0010051: xylem and phloem pattern formation3.27E-02
174GO:0010087: phloem or xylem histogenesis3.27E-02
175GO:0000226: microtubule cytoskeleton organization3.27E-02
176GO:0009742: brassinosteroid mediated signaling pathway3.30E-02
177GO:0015979: photosynthesis3.35E-02
178GO:0009741: response to brassinosteroid3.45E-02
179GO:0019252: starch biosynthetic process3.82E-02
180GO:0048235: pollen sperm cell differentiation4.20E-02
181GO:0007264: small GTPase mediated signal transduction4.20E-02
182GO:0032259: methylation4.35E-02
183GO:0010090: trichome morphogenesis4.39E-02
184GO:1901657: glycosyl compound metabolic process4.39E-02
185GO:0006629: lipid metabolic process4.59E-02
186GO:0009651: response to salt stress4.90E-02
RankGO TermAdjusted P value
1GO:0050613: delta14-sterol reductase activity0.00E+00
2GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
3GO:0045435: lycopene epsilon cyclase activity0.00E+00
4GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
5GO:0046905: phytoene synthase activity0.00E+00
6GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
7GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
8GO:0016762: xyloglucan:xyloglucosyl transferase activity6.06E-05
9GO:0016413: O-acetyltransferase activity1.09E-04
10GO:0015250: water channel activity1.21E-04
11GO:0016798: hydrolase activity, acting on glycosyl bonds1.62E-04
12GO:0030599: pectinesterase activity1.80E-04
13GO:0003838: sterol 24-C-methyltransferase activity3.94E-04
14GO:0051996: squalene synthase activity3.94E-04
15GO:0044715: 8-oxo-dGDP phosphatase activity3.94E-04
16GO:0042349: guiding stereospecific synthesis activity3.94E-04
17GO:0030797: 24-methylenesterol C-methyltransferase activity3.94E-04
18GO:0047259: glucomannan 4-beta-mannosyltransferase activity3.94E-04
19GO:0008252: nucleotidase activity3.94E-04
20GO:0052638: indole-3-butyrate beta-glucosyltransferase activity3.94E-04
21GO:0080132: fatty acid alpha-hydroxylase activity3.94E-04
22GO:0008568: microtubule-severing ATPase activity3.94E-04
23GO:0045330: aspartyl esterase activity8.05E-04
24GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase8.55E-04
25GO:0004310: farnesyl-diphosphate farnesyltransferase activity8.55E-04
26GO:0000234: phosphoethanolamine N-methyltransferase activity8.55E-04
27GO:0008967: phosphoglycolate phosphatase activity8.55E-04
28GO:0050017: L-3-cyanoalanine synthase activity8.55E-04
29GO:0042389: omega-3 fatty acid desaturase activity8.55E-04
30GO:0004618: phosphoglycerate kinase activity8.55E-04
31GO:0004047: aminomethyltransferase activity8.55E-04
32GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity8.55E-04
33GO:0016722: oxidoreductase activity, oxidizing metal ions8.95E-04
34GO:0004089: carbonate dehydratase activity1.36E-03
35GO:0004148: dihydrolipoyl dehydrogenase activity1.39E-03
36GO:0005457: GDP-fucose transmembrane transporter activity1.39E-03
37GO:0070330: aromatase activity1.39E-03
38GO:0050734: hydroxycinnamoyltransferase activity1.39E-03
39GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.53E-03
40GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.91E-03
41GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.91E-03
42GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.91E-03
43GO:0016149: translation release factor activity, codon specific2.00E-03
44GO:0005460: UDP-glucose transmembrane transporter activity2.00E-03
45GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.00E-03
46GO:0004550: nucleoside diphosphate kinase activity2.00E-03
47GO:0003878: ATP citrate synthase activity2.00E-03
48GO:0004375: glycine dehydrogenase (decarboxylating) activity2.00E-03
49GO:0003999: adenine phosphoribosyltransferase activity2.00E-03
50GO:0005528: FK506 binding2.12E-03
51GO:0004364: glutathione transferase activity2.56E-03
52GO:0015204: urea transmembrane transporter activity2.69E-03
53GO:0004659: prenyltransferase activity2.69E-03
54GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.69E-03
55GO:0010328: auxin influx transmembrane transporter activity2.69E-03
56GO:0004185: serine-type carboxypeptidase activity2.70E-03
57GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.81E-03
58GO:0030570: pectate lyase activity3.07E-03
59GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.28E-03
60GO:0018685: alkane 1-monooxygenase activity3.44E-03
61GO:0004356: glutamate-ammonia ligase activity3.44E-03
62GO:0008725: DNA-3-methyladenine glycosylase activity3.44E-03
63GO:0009922: fatty acid elongase activity3.44E-03
64GO:0005459: UDP-galactose transmembrane transporter activity3.44E-03
65GO:0042802: identical protein binding3.90E-03
66GO:0016208: AMP binding4.26E-03
67GO:0042578: phosphoric ester hydrolase activity4.26E-03
68GO:0019901: protein kinase binding4.86E-03
69GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.13E-03
70GO:0004124: cysteine synthase activity5.13E-03
71GO:0051920: peroxiredoxin activity5.13E-03
72GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity5.13E-03
73GO:0051753: mannan synthase activity5.13E-03
74GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.13E-03
75GO:0005200: structural constituent of cytoskeleton6.71E-03
76GO:0004564: beta-fructofuranosidase activity7.05E-03
77GO:0016209: antioxidant activity7.05E-03
78GO:0016758: transferase activity, transferring hexosyl groups7.98E-03
79GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.09E-03
80GO:0008889: glycerophosphodiester phosphodiesterase activity9.18E-03
81GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism9.18E-03
82GO:0003747: translation release factor activity9.18E-03
83GO:0004337: geranyltranstransferase activity9.18E-03
84GO:0004575: sucrose alpha-glucosidase activity1.03E-02
85GO:0004860: protein kinase inhibitor activity1.28E-02
86GO:0004161: dimethylallyltranstransferase activity1.28E-02
87GO:0005089: Rho guanyl-nucleotide exchange factor activity1.28E-02
88GO:0008378: galactosyltransferase activity1.41E-02
89GO:0004565: beta-galactosidase activity1.54E-02
90GO:0031072: heat shock protein binding1.54E-02
91GO:0005262: calcium channel activity1.54E-02
92GO:0031409: pigment binding1.96E-02
93GO:0003714: transcription corepressor activity2.11E-02
94GO:0004857: enzyme inhibitor activity2.11E-02
95GO:0043424: protein histidine kinase binding2.27E-02
96GO:0033612: receptor serine/threonine kinase binding2.43E-02
97GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.67E-02
98GO:0004650: polygalacturonase activity2.84E-02
99GO:0008514: organic anion transmembrane transporter activity2.92E-02
100GO:0003756: protein disulfide isomerase activity2.92E-02
101GO:0022857: transmembrane transporter activity2.93E-02
102GO:0005102: receptor binding3.09E-02
103GO:0016746: transferase activity, transferring acyl groups3.21E-02
104GO:0042803: protein homodimerization activity3.76E-02
105GO:0004871: signal transducer activity3.76E-02
106GO:0003824: catalytic activity3.77E-02
107GO:0004872: receptor activity3.82E-02
108GO:0048038: quinone binding4.01E-02
109GO:0016740: transferase activity4.14E-02
110GO:0000156: phosphorelay response regulator activity4.39E-02
111GO:0051015: actin filament binding4.39E-02
112GO:0003924: GTPase activity4.59E-02
113GO:0016759: cellulose synthase activity4.59E-02
114GO:0008483: transaminase activity4.79E-02
115GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.99E-02
RankGO TermAdjusted P value
1GO:0048046: apoplast2.44E-11
2GO:0009505: plant-type cell wall6.85E-10
3GO:0009535: chloroplast thylakoid membrane4.70E-08
4GO:0005576: extracellular region6.01E-08
5GO:0009543: chloroplast thylakoid lumen2.73E-07
6GO:0005618: cell wall4.59E-07
7GO:0009507: chloroplast5.19E-07
8GO:0009579: thylakoid2.28E-06
9GO:0009941: chloroplast envelope6.66E-06
10GO:0031225: anchored component of membrane7.76E-06
11GO:0046658: anchored component of plasma membrane2.73E-05
12GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)3.05E-05
13GO:0009570: chloroplast stroma1.39E-04
14GO:0009534: chloroplast thylakoid3.65E-04
15GO:0031977: thylakoid lumen3.81E-04
16GO:0009344: nitrite reductase complex [NAD(P)H]3.94E-04
17GO:0016020: membrane6.77E-04
18GO:0005794: Golgi apparatus8.23E-04
19GO:0042170: plastid membrane8.55E-04
20GO:0000139: Golgi membrane9.12E-04
21GO:0005886: plasma membrane1.25E-03
22GO:0030095: chloroplast photosystem II1.53E-03
23GO:0009346: citrate lyase complex2.00E-03
24GO:0005775: vacuolar lumen2.00E-03
25GO:0005960: glycine cleavage complex2.00E-03
26GO:0009654: photosystem II oxygen evolving complex2.34E-03
27GO:0010168: ER body4.26E-03
28GO:0009506: plasmodesma4.65E-03
29GO:0019898: extrinsic component of membrane4.86E-03
30GO:0005773: vacuole5.71E-03
31GO:0042807: central vacuole6.06E-03
32GO:0000123: histone acetyltransferase complex6.06E-03
33GO:0005887: integral component of plasma membrane6.09E-03
34GO:0010319: stromule6.71E-03
35GO:0031969: chloroplast membrane7.31E-03
36GO:0016021: integral component of membrane7.40E-03
37GO:0000326: protein storage vacuole8.09E-03
38GO:0045298: tubulin complex9.18E-03
39GO:0000325: plant-type vacuole1.14E-02
40GO:0055028: cortical microtubule1.15E-02
41GO:0016324: apical plasma membrane1.15E-02
42GO:0048471: perinuclear region of cytoplasm1.28E-02
43GO:0009508: plastid chromosome1.54E-02
44GO:0030076: light-harvesting complex1.82E-02
45GO:0030176: integral component of endoplasmic reticulum membrane1.82E-02
46GO:0005875: microtubule associated complex1.96E-02
47GO:0005758: mitochondrial intermembrane space2.11E-02
48GO:0042651: thylakoid membrane2.27E-02
49GO:0009532: plastid stroma2.43E-02
50GO:0005874: microtubule2.72E-02
51GO:0022626: cytosolic ribosome2.91E-02
52GO:0009522: photosystem I3.63E-02
53GO:0010287: plastoglobule3.69E-02
54GO:0009295: nucleoid4.79E-02
55GO:0005778: peroxisomal membrane4.79E-02
Gene type



Gene DE type