GO Enrichment Analysis of Co-expressed Genes with
AT2G44160
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 3 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
| 4 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 6 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 7 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 8 | GO:0042407: cristae formation | 0.00E+00 |
| 9 | GO:0006418: tRNA aminoacylation for protein translation | 1.02E-05 |
| 10 | GO:0010190: cytochrome b6f complex assembly | 2.08E-05 |
| 11 | GO:0009657: plastid organization | 6.66E-05 |
| 12 | GO:0032544: plastid translation | 6.66E-05 |
| 13 | GO:0006415: translational termination | 1.41E-04 |
| 14 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.41E-04 |
| 15 | GO:0019253: reductive pentose-phosphate cycle | 2.13E-04 |
| 16 | GO:0006423: cysteinyl-tRNA aminoacylation | 2.24E-04 |
| 17 | GO:0010270: photosystem II oxygen evolving complex assembly | 2.24E-04 |
| 18 | GO:0043039: tRNA aminoacylation | 2.24E-04 |
| 19 | GO:0006695: cholesterol biosynthetic process | 2.24E-04 |
| 20 | GO:0007010: cytoskeleton organization | 3.00E-04 |
| 21 | GO:0010581: regulation of starch biosynthetic process | 3.73E-04 |
| 22 | GO:0006433: prolyl-tRNA aminoacylation | 3.73E-04 |
| 23 | GO:0006696: ergosterol biosynthetic process | 3.73E-04 |
| 24 | GO:0046686: response to cadmium ion | 4.92E-04 |
| 25 | GO:0016117: carotenoid biosynthetic process | 5.13E-04 |
| 26 | GO:0006165: nucleoside diphosphate phosphorylation | 5.37E-04 |
| 27 | GO:0006228: UTP biosynthetic process | 5.37E-04 |
| 28 | GO:0006424: glutamyl-tRNA aminoacylation | 5.37E-04 |
| 29 | GO:0043572: plastid fission | 5.37E-04 |
| 30 | GO:0006241: CTP biosynthetic process | 5.37E-04 |
| 31 | GO:0046902: regulation of mitochondrial membrane permeability | 5.37E-04 |
| 32 | GO:0006546: glycine catabolic process | 7.14E-04 |
| 33 | GO:0010109: regulation of photosynthesis | 7.14E-04 |
| 34 | GO:0006183: GTP biosynthetic process | 7.14E-04 |
| 35 | GO:0045727: positive regulation of translation | 7.14E-04 |
| 36 | GO:0032543: mitochondrial translation | 9.02E-04 |
| 37 | GO:0006828: manganese ion transport | 1.10E-03 |
| 38 | GO:0006796: phosphate-containing compound metabolic process | 1.10E-03 |
| 39 | GO:0016554: cytidine to uridine editing | 1.10E-03 |
| 40 | GO:0009854: oxidative photosynthetic carbon pathway | 1.31E-03 |
| 41 | GO:0048481: plant ovule development | 1.33E-03 |
| 42 | GO:0009658: chloroplast organization | 1.66E-03 |
| 43 | GO:0007155: cell adhesion | 1.78E-03 |
| 44 | GO:0008610: lipid biosynthetic process | 1.78E-03 |
| 45 | GO:0019430: removal of superoxide radicals | 2.03E-03 |
| 46 | GO:0048193: Golgi vesicle transport | 2.03E-03 |
| 47 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.27E-03 |
| 48 | GO:0033384: geranyl diphosphate biosynthetic process | 2.29E-03 |
| 49 | GO:0048589: developmental growth | 2.29E-03 |
| 50 | GO:0045337: farnesyl diphosphate biosynthetic process | 2.29E-03 |
| 51 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.56E-03 |
| 52 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.56E-03 |
| 53 | GO:0043067: regulation of programmed cell death | 2.56E-03 |
| 54 | GO:1900865: chloroplast RNA modification | 2.56E-03 |
| 55 | GO:0006535: cysteine biosynthetic process from serine | 2.85E-03 |
| 56 | GO:0043069: negative regulation of programmed cell death | 2.85E-03 |
| 57 | GO:0043085: positive regulation of catalytic activity | 3.14E-03 |
| 58 | GO:0000272: polysaccharide catabolic process | 3.14E-03 |
| 59 | GO:0006816: calcium ion transport | 3.14E-03 |
| 60 | GO:0009773: photosynthetic electron transport in photosystem I | 3.14E-03 |
| 61 | GO:0006096: glycolytic process | 3.41E-03 |
| 62 | GO:0048316: seed development | 3.52E-03 |
| 63 | GO:0050826: response to freezing | 3.76E-03 |
| 64 | GO:0010020: chloroplast fission | 4.08E-03 |
| 65 | GO:0010207: photosystem II assembly | 4.08E-03 |
| 66 | GO:0007034: vacuolar transport | 4.08E-03 |
| 67 | GO:0010025: wax biosynthetic process | 4.75E-03 |
| 68 | GO:0019344: cysteine biosynthetic process | 5.10E-03 |
| 69 | GO:0007017: microtubule-based process | 5.46E-03 |
| 70 | GO:0080092: regulation of pollen tube growth | 6.20E-03 |
| 71 | GO:0009411: response to UV | 6.58E-03 |
| 72 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 6.58E-03 |
| 73 | GO:0019722: calcium-mediated signaling | 6.98E-03 |
| 74 | GO:0000271: polysaccharide biosynthetic process | 7.79E-03 |
| 75 | GO:0042631: cellular response to water deprivation | 7.79E-03 |
| 76 | GO:0010197: polar nucleus fusion | 8.21E-03 |
| 77 | GO:0045489: pectin biosynthetic process | 8.21E-03 |
| 78 | GO:0007018: microtubule-based movement | 8.63E-03 |
| 79 | GO:0071554: cell wall organization or biogenesis | 9.51E-03 |
| 80 | GO:0010583: response to cyclopentenone | 9.96E-03 |
| 81 | GO:0009828: plant-type cell wall loosening | 1.09E-02 |
| 82 | GO:0007267: cell-cell signaling | 1.14E-02 |
| 83 | GO:0010027: thylakoid membrane organization | 1.23E-02 |
| 84 | GO:0016126: sterol biosynthetic process | 1.23E-02 |
| 85 | GO:0009607: response to biotic stimulus | 1.28E-02 |
| 86 | GO:0018298: protein-chromophore linkage | 1.49E-02 |
| 87 | GO:0008219: cell death | 1.49E-02 |
| 88 | GO:0009793: embryo development ending in seed dormancy | 1.50E-02 |
| 89 | GO:0048767: root hair elongation | 1.54E-02 |
| 90 | GO:0045454: cell redox homeostasis | 1.63E-02 |
| 91 | GO:0016051: carbohydrate biosynthetic process | 1.76E-02 |
| 92 | GO:0009853: photorespiration | 1.76E-02 |
| 93 | GO:0071555: cell wall organization | 1.80E-02 |
| 94 | GO:0006839: mitochondrial transport | 1.93E-02 |
| 95 | GO:0006631: fatty acid metabolic process | 1.99E-02 |
| 96 | GO:0042542: response to hydrogen peroxide | 2.05E-02 |
| 97 | GO:0009664: plant-type cell wall organization | 2.47E-02 |
| 98 | GO:0006364: rRNA processing | 2.60E-02 |
| 99 | GO:0009585: red, far-red light phototransduction | 2.60E-02 |
| 100 | GO:0006810: transport | 2.92E-02 |
| 101 | GO:0048367: shoot system development | 3.00E-02 |
| 102 | GO:0005975: carbohydrate metabolic process | 3.04E-02 |
| 103 | GO:0009735: response to cytokinin | 3.26E-02 |
| 104 | GO:0009553: embryo sac development | 3.27E-02 |
| 105 | GO:0006396: RNA processing | 3.42E-02 |
| 106 | GO:0042744: hydrogen peroxide catabolic process | 4.30E-02 |
| 107 | GO:0055085: transmembrane transport | 4.51E-02 |
| 108 | GO:0006633: fatty acid biosynthetic process | 4.61E-02 |
| 109 | GO:0040008: regulation of growth | 4.77E-02 |
| 110 | GO:0007623: circadian rhythm | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 2 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 3 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 4 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 5 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 6 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 7 | GO:0004618: phosphoglycerate kinase activity | 4.79E-07 |
| 8 | GO:0016149: translation release factor activity, codon specific | 4.33E-06 |
| 9 | GO:0004812: aminoacyl-tRNA ligase activity | 2.15E-05 |
| 10 | GO:0003747: translation release factor activity | 8.24E-05 |
| 11 | GO:0051996: squalene synthase activity | 9.50E-05 |
| 12 | GO:0004560: alpha-L-fucosidase activity | 9.50E-05 |
| 13 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 9.50E-05 |
| 14 | GO:0080132: fatty acid alpha-hydroxylase activity | 9.50E-05 |
| 15 | GO:0004831: tyrosine-tRNA ligase activity | 9.50E-05 |
| 16 | GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity | 2.24E-04 |
| 17 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 2.24E-04 |
| 18 | GO:0050017: L-3-cyanoalanine synthase activity | 2.24E-04 |
| 19 | GO:0010297: heteropolysaccharide binding | 2.24E-04 |
| 20 | GO:0004047: aminomethyltransferase activity | 2.24E-04 |
| 21 | GO:0004817: cysteine-tRNA ligase activity | 2.24E-04 |
| 22 | GO:0004827: proline-tRNA ligase activity | 3.73E-04 |
| 23 | GO:0003913: DNA photolyase activity | 3.73E-04 |
| 24 | GO:0002161: aminoacyl-tRNA editing activity | 3.73E-04 |
| 25 | GO:0016740: transferase activity | 3.86E-04 |
| 26 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 5.37E-04 |
| 27 | GO:0004550: nucleoside diphosphate kinase activity | 5.37E-04 |
| 28 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 7.14E-04 |
| 29 | GO:0005471: ATP:ADP antiporter activity | 9.02E-04 |
| 30 | GO:0005200: structural constituent of cytoskeleton | 9.27E-04 |
| 31 | GO:0016462: pyrophosphatase activity | 1.10E-03 |
| 32 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.31E-03 |
| 33 | GO:0004124: cysteine synthase activity | 1.31E-03 |
| 34 | GO:0051920: peroxiredoxin activity | 1.31E-03 |
| 35 | GO:0004427: inorganic diphosphatase activity | 1.54E-03 |
| 36 | GO:0009881: photoreceptor activity | 1.54E-03 |
| 37 | GO:0005524: ATP binding | 1.78E-03 |
| 38 | GO:0016209: antioxidant activity | 1.78E-03 |
| 39 | GO:0004337: geranyltranstransferase activity | 2.29E-03 |
| 40 | GO:0005384: manganese ion transmembrane transporter activity | 2.56E-03 |
| 41 | GO:0008047: enzyme activator activity | 2.85E-03 |
| 42 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.14E-03 |
| 43 | GO:0004161: dimethylallyltranstransferase activity | 3.14E-03 |
| 44 | GO:0000049: tRNA binding | 3.44E-03 |
| 45 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.52E-03 |
| 46 | GO:0015095: magnesium ion transmembrane transporter activity | 3.76E-03 |
| 47 | GO:0031072: heat shock protein binding | 3.76E-03 |
| 48 | GO:0004565: beta-galactosidase activity | 3.76E-03 |
| 49 | GO:0005528: FK506 binding | 5.10E-03 |
| 50 | GO:0004176: ATP-dependent peptidase activity | 5.83E-03 |
| 51 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 6.20E-03 |
| 52 | GO:0003756: protein disulfide isomerase activity | 6.98E-03 |
| 53 | GO:0008017: microtubule binding | 7.39E-03 |
| 54 | GO:0050662: coenzyme binding | 8.63E-03 |
| 55 | GO:0004791: thioredoxin-disulfide reductase activity | 8.63E-03 |
| 56 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.04E-02 |
| 57 | GO:0008237: metallopeptidase activity | 1.14E-02 |
| 58 | GO:0008483: transaminase activity | 1.14E-02 |
| 59 | GO:0016413: O-acetyltransferase activity | 1.18E-02 |
| 60 | GO:0005516: calmodulin binding | 1.24E-02 |
| 61 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.43E-02 |
| 62 | GO:0052689: carboxylic ester hydrolase activity | 1.50E-02 |
| 63 | GO:0004222: metalloendopeptidase activity | 1.59E-02 |
| 64 | GO:0003746: translation elongation factor activity | 1.76E-02 |
| 65 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.81E-02 |
| 66 | GO:0003824: catalytic activity | 2.03E-02 |
| 67 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.35E-02 |
| 68 | GO:0016491: oxidoreductase activity | 2.55E-02 |
| 69 | GO:0003777: microtubule motor activity | 2.80E-02 |
| 70 | GO:0004672: protein kinase activity | 2.92E-02 |
| 71 | GO:0003729: mRNA binding | 2.97E-02 |
| 72 | GO:0051082: unfolded protein binding | 3.34E-02 |
| 73 | GO:0016758: transferase activity, transferring hexosyl groups | 3.85E-02 |
| 74 | GO:0019843: rRNA binding | 3.92E-02 |
| 75 | GO:0030170: pyridoxal phosphate binding | 4.23E-02 |
| 76 | GO:0030246: carbohydrate binding | 4.77E-02 |
| 77 | GO:0016301: kinase activity | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 1.37E-13 |
| 3 | GO:0009507: chloroplast | 1.40E-10 |
| 4 | GO:0009941: chloroplast envelope | 2.91E-09 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 4.52E-05 |
| 6 | GO:0017101: aminoacyl-tRNA synthetase multienzyme complex | 9.50E-05 |
| 7 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 9.50E-05 |
| 8 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 2.24E-04 |
| 9 | GO:0009579: thylakoid | 3.72E-04 |
| 10 | GO:0009534: chloroplast thylakoid | 3.78E-04 |
| 11 | GO:0010287: plastoglobule | 6.06E-04 |
| 12 | GO:0009543: chloroplast thylakoid lumen | 6.48E-04 |
| 13 | GO:0010319: stromule | 9.27E-04 |
| 14 | GO:0010168: ER body | 1.10E-03 |
| 15 | GO:0000815: ESCRT III complex | 1.31E-03 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 1.54E-03 |
| 17 | GO:0005874: microtubule | 2.08E-03 |
| 18 | GO:0045298: tubulin complex | 2.29E-03 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.29E-03 |
| 20 | GO:0048046: apoplast | 2.63E-03 |
| 21 | GO:0016324: apical plasma membrane | 2.85E-03 |
| 22 | GO:0009508: plastid chromosome | 3.76E-03 |
| 23 | GO:0030176: integral component of endoplasmic reticulum membrane | 4.41E-03 |
| 24 | GO:0005875: microtubule associated complex | 4.75E-03 |
| 25 | GO:0005773: vacuole | 5.53E-03 |
| 26 | GO:0005871: kinesin complex | 7.38E-03 |
| 27 | GO:0005618: cell wall | 1.05E-02 |
| 28 | GO:0009295: nucleoid | 1.14E-02 |
| 29 | GO:0031225: anchored component of membrane | 1.30E-02 |
| 30 | GO:0031969: chloroplast membrane | 1.36E-02 |
| 31 | GO:0000325: plant-type vacuole | 1.65E-02 |
| 32 | GO:0005743: mitochondrial inner membrane | 1.87E-02 |
| 33 | GO:0031977: thylakoid lumen | 1.99E-02 |
| 34 | GO:0005856: cytoskeleton | 2.29E-02 |
| 35 | GO:0009536: plastid | 2.33E-02 |
| 36 | GO:0009505: plant-type cell wall | 2.40E-02 |
| 37 | GO:0009706: chloroplast inner membrane | 3.34E-02 |
| 38 | GO:0005759: mitochondrial matrix | 4.61E-02 |