Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G43680

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070291: N-acylethanolamine metabolic process0.00E+00
2GO:0000188: inactivation of MAPK activity0.00E+00
3GO:0010398: xylogalacturonan metabolic process0.00E+00
4GO:0016236: macroautophagy0.00E+00
5GO:0010241: ent-kaurene oxidation to kaurenoic acid0.00E+00
6GO:0009991: response to extracellular stimulus0.00E+00
7GO:0010111: glyoxysome organization0.00E+00
8GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
9GO:0046459: short-chain fatty acid metabolic process0.00E+00
10GO:0048227: plasma membrane to endosome transport0.00E+00
11GO:0006480: N-terminal protein amino acid methylation0.00E+00
12GO:0006635: fatty acid beta-oxidation1.02E-04
13GO:0030968: endoplasmic reticulum unfolded protein response1.36E-04
14GO:0098721: uracil import across plasma membrane1.52E-04
15GO:0098702: adenine import across plasma membrane1.52E-04
16GO:0046167: glycerol-3-phosphate biosynthetic process1.52E-04
17GO:0034063: stress granule assembly1.52E-04
18GO:0010603: regulation of cytoplasmic mRNA processing body assembly1.52E-04
19GO:0098710: guanine import across plasma membrane1.52E-04
20GO:0030242: pexophagy1.52E-04
21GO:1990641: response to iron ion starvation1.52E-04
22GO:0035344: hypoxanthine transport1.52E-04
23GO:0008202: steroid metabolic process2.00E-04
24GO:0010150: leaf senescence3.29E-04
25GO:0034243: regulation of transcription elongation from RNA polymerase II promoter3.47E-04
26GO:0019395: fatty acid oxidation3.47E-04
27GO:0009257: 10-formyltetrahydrofolate biosynthetic process3.47E-04
28GO:0006641: triglyceride metabolic process3.47E-04
29GO:0006101: citrate metabolic process3.47E-04
30GO:0051258: protein polymerization3.47E-04
31GO:0032786: positive regulation of DNA-templated transcription, elongation5.68E-04
32GO:0046786: viral replication complex formation and maintenance5.68E-04
33GO:0019563: glycerol catabolic process5.68E-04
34GO:0051259: protein oligomerization8.13E-04
35GO:0006624: vacuolar protein processing8.13E-04
36GO:0006072: glycerol-3-phosphate metabolic process8.13E-04
37GO:0009399: nitrogen fixation8.13E-04
38GO:0009113: purine nucleobase biosynthetic process8.13E-04
39GO:0010188: response to microbial phytotoxin1.08E-03
40GO:0070534: protein K63-linked ubiquitination1.08E-03
41GO:1902584: positive regulation of response to water deprivation1.08E-03
42GO:0010508: positive regulation of autophagy1.08E-03
43GO:0045324: late endosome to vacuole transport1.08E-03
44GO:0042594: response to starvation1.08E-03
45GO:0006623: protein targeting to vacuole1.25E-03
46GO:0010225: response to UV-C1.36E-03
47GO:0046907: intracellular transport1.36E-03
48GO:0007264: small GTPase mediated signal transduction1.43E-03
49GO:0006914: autophagy1.61E-03
50GO:0006301: postreplication repair1.67E-03
51GO:0070814: hydrogen sulfide biosynthetic process1.67E-03
52GO:0006086: acetyl-CoA biosynthetic process from pyruvate1.67E-03
53GO:0048280: vesicle fusion with Golgi apparatus2.01E-03
54GO:0006950: response to stress2.26E-03
55GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.36E-03
56GO:0009396: folic acid-containing compound biosynthetic process2.36E-03
57GO:0070370: cellular heat acclimation2.36E-03
58GO:0010311: lateral root formation2.62E-03
59GO:0006102: isocitrate metabolic process2.73E-03
60GO:0016559: peroxisome fission2.73E-03
61GO:0006605: protein targeting2.73E-03
62GO:0019375: galactolipid biosynthetic process2.73E-03
63GO:0006499: N-terminal protein myristoylation2.75E-03
64GO:0007165: signal transduction3.17E-03
65GO:0006099: tricarboxylic acid cycle3.29E-03
66GO:0007338: single fertilization3.53E-03
67GO:0009738: abscisic acid-activated signaling pathway3.66E-03
68GO:0035999: tetrahydrofolate interconversion3.96E-03
69GO:2000280: regulation of root development3.96E-03
70GO:0006970: response to osmotic stress4.11E-03
71GO:0035556: intracellular signal transduction4.18E-03
72GO:0048829: root cap development4.40E-03
73GO:0006298: mismatch repair4.40E-03
74GO:0006896: Golgi to vacuole transport4.40E-03
75GO:0006325: chromatin organization4.40E-03
76GO:0007064: mitotic sister chromatid cohesion4.40E-03
77GO:0006535: cysteine biosynthetic process from serine4.40E-03
78GO:0000103: sulfate assimilation4.40E-03
79GO:0009723: response to ethylene4.50E-03
80GO:0006378: mRNA polyadenylation4.86E-03
81GO:0072593: reactive oxygen species metabolic process4.86E-03
82GO:0046777: protein autophosphorylation5.35E-03
83GO:0051603: proteolysis involved in cellular protein catabolic process5.65E-03
84GO:0055046: microgametogenesis5.83E-03
85GO:0006468: protein phosphorylation5.94E-03
86GO:0009887: animal organ morphogenesis6.33E-03
87GO:0034605: cellular response to heat6.33E-03
88GO:0002237: response to molecule of bacterial origin6.33E-03
89GO:0010053: root epidermal cell differentiation6.86E-03
90GO:0007031: peroxisome organization6.86E-03
91GO:0010167: response to nitrate6.86E-03
92GO:0010039: response to iron ion6.86E-03
93GO:0006869: lipid transport6.94E-03
94GO:0000162: tryptophan biosynthetic process7.40E-03
95GO:0034976: response to endoplasmic reticulum stress7.40E-03
96GO:0006289: nucleotide-excision repair7.95E-03
97GO:2000377: regulation of reactive oxygen species metabolic process7.95E-03
98GO:0019344: cysteine biosynthetic process7.95E-03
99GO:0016575: histone deacetylation8.51E-03
100GO:0009695: jasmonic acid biosynthetic process8.51E-03
101GO:0031408: oxylipin biosynthetic process9.10E-03
102GO:0071215: cellular response to abscisic acid stimulus1.03E-02
103GO:0009686: gibberellin biosynthetic process1.03E-02
104GO:0009561: megagametogenesis1.09E-02
105GO:0042742: defense response to bacterium1.12E-02
106GO:0006979: response to oxidative stress1.13E-02
107GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.16E-02
108GO:0042147: retrograde transport, endosome to Golgi1.16E-02
109GO:0015991: ATP hydrolysis coupled proton transport1.22E-02
110GO:0010182: sugar mediated signaling pathway1.29E-02
111GO:0045489: pectin biosynthetic process1.29E-02
112GO:0010154: fruit development1.29E-02
113GO:0048544: recognition of pollen1.36E-02
114GO:0008654: phospholipid biosynthetic process1.42E-02
115GO:0009749: response to glucose1.42E-02
116GO:0006891: intra-Golgi vesicle-mediated transport1.50E-02
117GO:0009630: gravitropism1.57E-02
118GO:0010583: response to cyclopentenone1.57E-02
119GO:0016032: viral process1.57E-02
120GO:0009617: response to bacterium1.61E-02
121GO:0071281: cellular response to iron ion1.64E-02
122GO:0009567: double fertilization forming a zygote and endosperm1.71E-02
123GO:0010286: heat acclimation1.79E-02
124GO:0001666: response to hypoxia1.94E-02
125GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.02E-02
126GO:0009816: defense response to bacterium, incompatible interaction2.02E-02
127GO:0006888: ER to Golgi vesicle-mediated transport2.18E-02
128GO:0009817: defense response to fungus, incompatible interaction2.34E-02
129GO:0080167: response to karrikin2.59E-02
130GO:0010043: response to zinc ion2.60E-02
131GO:0048527: lateral root development2.60E-02
132GO:0006865: amino acid transport2.69E-02
133GO:0016192: vesicle-mediated transport2.72E-02
134GO:0009867: jasmonic acid mediated signaling pathway2.78E-02
135GO:0045454: cell redox homeostasis3.10E-02
136GO:0006897: endocytosis3.14E-02
137GO:0000209: protein polyubiquitination3.42E-02
138GO:0009751: response to salicylic acid3.76E-02
139GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.81E-02
140GO:0009846: pollen germination3.91E-02
141GO:0006397: mRNA processing3.98E-02
142GO:0048364: root development3.98E-02
143GO:0010224: response to UV-B4.21E-02
144GO:0006096: glycolytic process4.63E-02
RankGO TermAdjusted P value
1GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity0.00E+00
2GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
3GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity0.00E+00
4GO:0052616: ent-kaur-16-en-19-ol oxidase activity0.00E+00
5GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity0.00E+00
6GO:0052617: ent-kaur-16-en-19-al oxidase activity0.00E+00
7GO:0052615: ent-kaurene oxidase activity0.00E+00
8GO:0103073: anandamide amidohydrolase activity0.00E+00
9GO:0102077: oleamide hydrolase activity0.00E+00
10GO:0004370: glycerol kinase activity0.00E+00
11GO:0008142: oxysterol binding1.36E-04
12GO:0015208: guanine transmembrane transporter activity1.52E-04
13GO:0015294: solute:cation symporter activity1.52E-04
14GO:0030544: Hsp70 protein binding1.52E-04
15GO:0015207: adenine transmembrane transporter activity1.52E-04
16GO:0019707: protein-cysteine S-acyltransferase activity1.52E-04
17GO:0004566: beta-glucuronidase activity3.47E-04
18GO:0003994: aconitate hydratase activity3.47E-04
19GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity3.47E-04
20GO:0004477: methenyltetrahydrofolate cyclohydrolase activity3.47E-04
21GO:0032934: sterol binding3.47E-04
22GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding3.47E-04
23GO:0003988: acetyl-CoA C-acyltransferase activity3.47E-04
24GO:0004329: formate-tetrahydrofolate ligase activity3.47E-04
25GO:0019200: carbohydrate kinase activity3.47E-04
26GO:0004781: sulfate adenylyltransferase (ATP) activity5.68E-04
27GO:0005093: Rab GDP-dissociation inhibitor activity5.68E-04
28GO:0005047: signal recognition particle binding5.68E-04
29GO:0048027: mRNA 5'-UTR binding8.13E-04
30GO:0004108: citrate (Si)-synthase activity8.13E-04
31GO:0004834: tryptophan synthase activity1.08E-03
32GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity1.08E-03
33GO:0043015: gamma-tubulin binding1.08E-03
34GO:0015210: uracil transmembrane transporter activity1.08E-03
35GO:0000993: RNA polymerase II core binding1.08E-03
36GO:0003995: acyl-CoA dehydrogenase activity1.08E-03
37GO:0016004: phospholipase activator activity1.08E-03
38GO:0003997: acyl-CoA oxidase activity1.36E-03
39GO:0004356: glutamate-ammonia ligase activity1.36E-03
40GO:0004040: amidase activity1.36E-03
41GO:0035252: UDP-xylosyltransferase activity1.67E-03
42GO:0004124: cysteine synthase activity2.01E-03
43GO:0008195: phosphatidate phosphatase activity2.01E-03
44GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)3.12E-03
45GO:0003746: translation elongation factor activity3.15E-03
46GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity3.53E-03
47GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity3.96E-03
48GO:0004713: protein tyrosine kinase activity4.40E-03
49GO:0061630: ubiquitin protein ligase activity5.24E-03
50GO:0004521: endoribonuclease activity5.34E-03
51GO:0000976: transcription regulatory region sequence-specific DNA binding5.34E-03
52GO:0004672: protein kinase activity5.76E-03
53GO:0019888: protein phosphatase regulator activity5.83E-03
54GO:0031625: ubiquitin protein ligase binding6.04E-03
55GO:0004175: endopeptidase activity6.33E-03
56GO:0016301: kinase activity6.49E-03
57GO:0005507: copper ion binding6.58E-03
58GO:0004725: protein tyrosine phosphatase activity7.40E-03
59GO:0004407: histone deacetylase activity7.95E-03
60GO:0043130: ubiquitin binding7.95E-03
61GO:0043424: protein histidine kinase binding8.51E-03
62GO:0019706: protein-cysteine S-palmitoyltransferase activity9.10E-03
63GO:0005524: ATP binding9.73E-03
64GO:0003727: single-stranded RNA binding1.09E-02
65GO:0003756: protein disulfide isomerase activity1.09E-02
66GO:0016853: isomerase activity1.36E-02
67GO:0004872: receptor activity1.42E-02
68GO:0004197: cysteine-type endopeptidase activity1.57E-02
69GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.64E-02
70GO:0000166: nucleotide binding1.67E-02
71GO:0004674: protein serine/threonine kinase activity1.69E-02
72GO:0003684: damaged DNA binding1.71E-02
73GO:0003729: mRNA binding2.04E-02
74GO:0009931: calcium-dependent protein serine/threonine kinase activity2.10E-02
75GO:0004683: calmodulin-dependent protein kinase activity2.18E-02
76GO:0003682: chromatin binding2.21E-02
77GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.26E-02
78GO:0050660: flavin adenine dinucleotide binding2.41E-02
79GO:0005096: GTPase activator activity2.43E-02
80GO:0003697: single-stranded DNA binding2.78E-02
81GO:0000149: SNARE binding2.95E-02
82GO:0004712: protein serine/threonine/tyrosine kinase activity2.95E-02
83GO:0051539: 4 iron, 4 sulfur cluster binding3.05E-02
84GO:0004871: signal transducer activity3.24E-02
85GO:0005484: SNAP receptor activity3.32E-02
86GO:0016787: hydrolase activity3.48E-02
87GO:0043621: protein self-association3.52E-02
88GO:0035091: phosphatidylinositol binding3.52E-02
89GO:0005509: calcium ion binding3.65E-02
90GO:0003924: GTPase activity3.81E-02
91GO:0015171: amino acid transmembrane transporter activity4.42E-02
92GO:0005515: protein binding4.64E-02
RankGO TermAdjusted P value
1GO:0071942: XPC complex0.00E+00
2GO:0000111: nucleotide-excision repair factor 2 complex0.00E+00
3GO:0005785: signal recognition particle receptor complex0.00E+00
4GO:0071561: nucleus-vacuole junction0.00E+00
5GO:0005773: vacuole6.79E-05
6GO:0009514: glyoxysome1.36E-04
7GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I1.52E-04
8GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II1.52E-04
9GO:0032044: DSIF complex1.52E-04
10GO:0042406: extrinsic component of endoplasmic reticulum membrane5.68E-04
11GO:0005783: endoplasmic reticulum5.85E-04
12GO:0005849: mRNA cleavage factor complex8.13E-04
13GO:0000323: lytic vacuole8.13E-04
14GO:0005774: vacuolar membrane8.84E-04
15GO:0031372: UBC13-MMS2 complex1.08E-03
16GO:0032586: protein storage vacuole membrane1.08E-03
17GO:0033179: proton-transporting V-type ATPase, V0 domain1.08E-03
18GO:0005770: late endosome1.09E-03
19GO:0005829: cytosol1.29E-03
20GO:0005794: Golgi apparatus1.31E-03
21GO:0030140: trans-Golgi network transport vesicle1.67E-03
22GO:0012507: ER to Golgi transport vesicle membrane2.73E-03
23GO:0030131: clathrin adaptor complex2.73E-03
24GO:0000326: protein storage vacuole3.12E-03
25GO:0005779: integral component of peroxisomal membrane3.12E-03
26GO:0034045: pre-autophagosomal structure membrane3.12E-03
27GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.12E-03
28GO:0010494: cytoplasmic stress granule3.53E-03
29GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.20E-03
30GO:0030125: clathrin vesicle coat4.40E-03
31GO:0005777: peroxisome4.74E-03
32GO:0000159: protein phosphatase type 2A complex4.86E-03
33GO:0005765: lysosomal membrane4.86E-03
34GO:0005802: trans-Golgi network7.87E-03
35GO:0005905: clathrin-coated pit9.10E-03
36GO:0016021: integral component of membrane9.51E-03
37GO:0005886: plasma membrane9.72E-03
38GO:0005737: cytoplasm1.08E-02
39GO:0005778: peroxisomal membrane1.79E-02
40GO:0005788: endoplasmic reticulum lumen2.02E-02
41GO:0005789: endoplasmic reticulum membrane2.12E-02
42GO:0009707: chloroplast outer membrane2.34E-02
43GO:0005643: nuclear pore2.34E-02
44GO:0000325: plant-type vacuole2.60E-02
45GO:0031201: SNARE complex3.14E-02
46GO:0031902: late endosome membrane3.14E-02
47GO:0005768: endosome3.54E-02
48GO:0000502: proteasome complex4.11E-02
49GO:0005834: heterotrimeric G-protein complex4.84E-02
Gene type



Gene DE type