co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G43420

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
2	GO:0006592: ornithine biosynthetic process	0.00E+00
3	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
4	GO:0006105: succinate metabolic process	0.00E+00
5	GO:0032497: detection of lipopolysaccharide	0.00E+00
6	GO:0045022: early endosome to late endosome transport	0.00E+00
7	GO:0019484: beta-alanine catabolic process	0.00E+00
8	GO:0046459: short-chain fatty acid metabolic process	0.00E+00
9	GO:0006983: ER overload response	0.00E+00
10	GO:0006725: cellular aromatic compound metabolic process	0.00E+00
11	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
12	GO:0042344: indole glucosinolate catabolic process	9.64E-06
13	GO:0009399: nitrogen fixation	2.19E-05
14	GO:0006624: vacuolar protein processing	2.19E-05
15	GO:0051603: proteolysis involved in cellular protein catabolic process	2.27E-04
16	GO:0035266: meristem growth	2.39E-04
17	GO:0098710: guanine import across plasma membrane	2.39E-04
18	GO:0009450: gamma-aminobutyric acid catabolic process	2.39E-04
19	GO:0007292: female gamete generation	2.39E-04
20	GO:1903409: reactive oxygen species biosynthetic process	2.39E-04
21	GO:0010184: cytokinin transport	2.39E-04
22	GO:0035344: hypoxanthine transport	2.39E-04
23	GO:0071366: cellular response to indolebutyric acid stimulus	2.39E-04
24	GO:0009865: pollen tube adhesion	2.39E-04
25	GO:0006540: glutamate decarboxylation to succinate	2.39E-04
26	GO:0098721: uracil import across plasma membrane	2.39E-04
27	GO:0098702: adenine import across plasma membrane	2.39E-04
28	GO:0046167: glycerol-3-phosphate biosynthetic process	2.39E-04
29	GO:0006635: fatty acid beta-oxidation	2.51E-04
30	GO:0010286: heat acclimation	3.53E-04
31	GO:0048829: root cap development	4.48E-04
32	GO:0052544: defense response by callose deposition in cell wall	5.19E-04
33	GO:0032509: endosome transport via multivesicular body sorting pathway	5.29E-04
34	GO:0010033: response to organic substance	5.29E-04
35	GO:0006641: triglyceride metabolic process	5.29E-04
36	GO:0043066: negative regulation of apoptotic process	5.29E-04
37	GO:0051788: response to misfolded protein	5.29E-04
38	GO:1902000: homogentisate catabolic process	5.29E-04
39	GO:0052542: defense response by callose deposition	5.29E-04
40	GO:0051258: protein polymerization	5.29E-04
41	GO:0019441: tryptophan catabolic process to kynurenine	5.29E-04
42	GO:0009308: amine metabolic process	5.29E-04
43	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	5.29E-04
44	GO:0016192: vesicle-mediated transport	5.34E-04
45	GO:0007034: vacuolar transport	7.56E-04
46	GO:0042742: defense response to bacterium	7.68E-04
47	GO:0045087: innate immune response	7.79E-04
48	GO:0016051: carbohydrate biosynthetic process	7.79E-04
49	GO:0030029: actin filament-based process	8.60E-04
50	GO:0009072: aromatic amino acid family metabolic process	8.60E-04
51	GO:0060968: regulation of gene silencing	8.60E-04
52	GO:0006954: inflammatory response	8.60E-04
53	GO:0019563: glycerol catabolic process	8.60E-04
54	GO:0061158: 3'-UTR-mediated mRNA destabilization	8.60E-04
55	GO:0048194: Golgi vesicle budding	1.23E-03
56	GO:0006020: inositol metabolic process	1.23E-03
57	GO:0070301: cellular response to hydrogen peroxide	1.23E-03
58	GO:0072334: UDP-galactose transmembrane transport	1.23E-03
59	GO:0006072: glycerol-3-phosphate metabolic process	1.23E-03
60	GO:0009113: purine nucleobase biosynthetic process	1.23E-03
61	GO:0015749: monosaccharide transport	1.23E-03
62	GO:0006809: nitric oxide biosynthetic process	1.23E-03
63	GO:1901332: negative regulation of lateral root development	1.23E-03
64	GO:0006882: cellular zinc ion homeostasis	1.23E-03
65	GO:0000578: embryonic axis specification	1.23E-03
66	GO:0006572: tyrosine catabolic process	1.23E-03
67	GO:0051259: protein oligomerization	1.23E-03
68	GO:0009269: response to desiccation	1.25E-03
69	GO:0006536: glutamate metabolic process	1.64E-03
70	GO:0010188: response to microbial phytotoxin	1.64E-03
71	GO:0006878: cellular copper ion homeostasis	1.64E-03
72	GO:0006542: glutamine biosynthetic process	1.64E-03
73	GO:0010222: stem vascular tissue pattern formation	1.64E-03
74	GO:0048367: shoot system development	1.99E-03
75	GO:0046686: response to cadmium ion	2.02E-03
76	GO:0043097: pyrimidine nucleoside salvage	2.09E-03
77	GO:0015691: cadmium ion transport	2.57E-03
78	GO:0048827: phyllome development	2.57E-03
79	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.57E-03
80	GO:0048232: male gamete generation	2.57E-03
81	GO:0043248: proteasome assembly	2.57E-03
82	GO:0042732: D-xylose metabolic process	2.57E-03
83	GO:1900425: negative regulation of defense response to bacterium	2.57E-03
84	GO:0010337: regulation of salicylic acid metabolic process	2.57E-03
85	GO:0006206: pyrimidine nucleobase metabolic process	2.57E-03
86	GO:0006014: D-ribose metabolic process	2.57E-03
87	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.57E-03
88	GO:0006914: autophagy	3.03E-03
89	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.09E-03
90	GO:0031930: mitochondria-nucleus signaling pathway	3.09E-03
91	GO:0045454: cell redox homeostasis	3.11E-03
92	GO:0098869: cellular oxidant detoxification	3.64E-03
93	GO:0006955: immune response	3.64E-03
94	GO:0009395: phospholipid catabolic process	3.64E-03
95	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.64E-03
96	GO:0071669: plant-type cell wall organization or biogenesis	3.64E-03
97	GO:0009396: folic acid-containing compound biosynthetic process	3.64E-03
98	GO:0006333: chromatin assembly or disassembly	3.64E-03
99	GO:0010044: response to aluminum ion	3.64E-03
100	GO:0016559: peroxisome fission	4.23E-03
101	GO:0009819: drought recovery	4.23E-03
102	GO:0006605: protein targeting	4.23E-03
103	GO:0009415: response to water	4.23E-03
104	GO:1900150: regulation of defense response to fungus	4.23E-03
105	GO:0010078: maintenance of root meristem identity	4.23E-03
106	GO:0006950: response to stress	4.25E-03
107	GO:0048364: root development	4.57E-03
108	GO:0009817: defense response to fungus, incompatible interaction	4.70E-03
109	GO:0008219: cell death	4.70E-03
110	GO:0006526: arginine biosynthetic process	4.84E-03
111	GO:0010150: leaf senescence	4.85E-03
112	GO:0009409: response to cold	4.87E-03
113	GO:0010311: lateral root formation	4.94E-03
114	GO:0006499: N-terminal protein myristoylation	5.18E-03
115	GO:0009821: alkaloid biosynthetic process	5.48E-03
116	GO:0006098: pentose-phosphate shunt	5.48E-03
117	GO:0046916: cellular transition metal ion homeostasis	5.48E-03
118	GO:0010468: regulation of gene expression	6.08E-03
119	GO:0009617: response to bacterium	6.08E-03
120	GO:0035999: tetrahydrofolate interconversion	6.15E-03
121	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.15E-03
122	GO:0008202: steroid metabolic process	6.15E-03
123	GO:0009641: shade avoidance	6.85E-03
124	GO:0006535: cysteine biosynthetic process from serine	6.85E-03
125	GO:0009688: abscisic acid biosynthetic process	6.85E-03
126	GO:0043069: negative regulation of programmed cell death	6.85E-03
127	GO:0010015: root morphogenesis	7.58E-03
128	GO:0000038: very long-chain fatty acid metabolic process	7.58E-03
129	GO:0009682: induced systemic resistance	7.58E-03
130	GO:0043085: positive regulation of catalytic activity	7.58E-03
131	GO:0006378: mRNA polyadenylation	7.58E-03
132	GO:0000266: mitochondrial fission	8.33E-03
133	GO:0006508: proteolysis	8.79E-03
134	GO:0006979: response to oxidative stress	9.21E-03
135	GO:0000165: MAPK cascade	9.31E-03
136	GO:0006541: glutamine metabolic process	9.92E-03
137	GO:0002237: response to molecule of bacterial origin	9.92E-03
138	GO:0009933: meristem structural organization	9.92E-03
139	GO:0009651: response to salt stress	1.06E-02
140	GO:0007031: peroxisome organization	1.07E-02
141	GO:0010167: response to nitrate	1.07E-02
142	GO:0005985: sucrose metabolic process	1.07E-02
143	GO:0090351: seedling development	1.07E-02
144	GO:0000162: tryptophan biosynthetic process	1.16E-02
145	GO:0034976: response to endoplasmic reticulum stress	1.16E-02
146	GO:0006863: purine nucleobase transport	1.16E-02
147	GO:0009737: response to abscisic acid	1.18E-02
148	GO:0055114: oxidation-reduction process	1.22E-02
149	GO:0019344: cysteine biosynthetic process	1.25E-02
150	GO:0045333: cellular respiration	1.25E-02
151	GO:0009626: plant-type hypersensitive response	1.31E-02
152	GO:0030433: ubiquitin-dependent ERAD pathway	1.53E-02
153	GO:0031348: negative regulation of defense response	1.53E-02
154	GO:0006012: galactose metabolic process	1.62E-02
155	GO:0071215: cellular response to abscisic acid stimulus	1.62E-02
156	GO:0040007: growth	1.62E-02
157	GO:0015991: ATP hydrolysis coupled proton transport	1.93E-02
158	GO:0042631: cellular response to water deprivation	1.93E-02
159	GO:0042391: regulation of membrane potential	1.93E-02
160	GO:0000271: polysaccharide biosynthetic process	1.93E-02
161	GO:0010154: fruit development	2.03E-02
162	GO:0046323: glucose import	2.03E-02
163	GO:0048544: recognition of pollen	2.14E-02
164	GO:0009851: auxin biosynthetic process	2.25E-02
165	GO:0010183: pollen tube guidance	2.25E-02
166	GO:0009749: response to glucose	2.25E-02
167	GO:0019252: starch biosynthetic process	2.25E-02
168	GO:0009567: double fertilization forming a zygote and endosperm	2.71E-02
169	GO:0019760: glucosinolate metabolic process	2.71E-02
170	GO:0009414: response to water deprivation	2.83E-02
171	GO:0051607: defense response to virus	2.95E-02
172	GO:0001666: response to hypoxia	3.07E-02
173	GO:0007165: signal transduction	3.17E-02
174	GO:0010029: regulation of seed germination	3.19E-02
175	GO:0009627: systemic acquired resistance	3.32E-02
176	GO:0042128: nitrate assimilation	3.32E-02
177	GO:0048573: photoperiodism, flowering	3.45E-02
178	GO:0030244: cellulose biosynthetic process	3.71E-02
179	GO:0048767: root hair elongation	3.84E-02
180	GO:0009832: plant-type cell wall biogenesis	3.84E-02
181	GO:0006811: ion transport	3.97E-02
182	GO:0035556: intracellular signal transduction	3.99E-02
183	GO:0009631: cold acclimation	4.11E-02
184	GO:0010043: response to zinc ion	4.11E-02
185	GO:0016310: phosphorylation	4.15E-02
186	GO:0015031: protein transport	4.15E-02
187	GO:0006865: amino acid transport	4.25E-02
188	GO:0006970: response to osmotic stress	4.26E-02
189	GO:0006099: tricarboxylic acid cycle	4.53E-02
190	GO:0030001: metal ion transport	4.81E-02
191	GO:0080167: response to karrikin	4.89E-02
192	GO:0006897: endocytosis	4.95E-02
193	GO:0055085: transmembrane transport	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0019211: phosphatase activator activity	0.00E+00
2	GO:0009045: xylose isomerase activity	0.00E+00
3	GO:0016701: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	0.00E+00
4	GO:0010293: abscisic aldehyde oxidase activity	0.00E+00
5	GO:0004334: fumarylacetoacetase activity	0.00E+00
6	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
7	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
8	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
9	GO:0004370: glycerol kinase activity	0.00E+00
10	GO:0008777: acetylornithine deacetylase activity	0.00E+00
11	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
12	GO:0004356: glutamate-ammonia ligase activity	6.36E-05
13	GO:0009679: hexose:proton symporter activity	2.39E-04
14	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	2.39E-04
15	GO:0001530: lipopolysaccharide binding	2.39E-04
16	GO:0046870: cadmium ion binding	2.39E-04
17	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	2.39E-04
18	GO:0015208: guanine transmembrane transporter activity	2.39E-04
19	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.39E-04
20	GO:0052595: aliphatic-amine oxidase activity	2.39E-04
21	GO:0015294: solute:cation symporter activity	2.39E-04
22	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	2.39E-04
23	GO:0003867: 4-aminobutyrate transaminase activity	2.39E-04
24	GO:0030544: Hsp70 protein binding	2.39E-04
25	GO:0015207: adenine transmembrane transporter activity	2.39E-04
26	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.39E-04
27	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	2.39E-04
28	GO:0004197: cysteine-type endopeptidase activity	2.75E-04
29	GO:0047216: inositol 3-alpha-galactosyltransferase activity	5.29E-04
30	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	5.29E-04
31	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	5.29E-04
32	GO:0004061: arylformamidase activity	5.29E-04
33	GO:0004329: formate-tetrahydrofolate ligase activity	5.29E-04
34	GO:0019200: carbohydrate kinase activity	5.29E-04
35	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	5.29E-04
36	GO:0004566: beta-glucuronidase activity	5.29E-04
37	GO:0032791: lead ion binding	5.29E-04
38	GO:0005047: signal recognition particle binding	8.60E-04
39	GO:0004383: guanylate cyclase activity	8.60E-04
40	GO:0004300: enoyl-CoA hydratase activity	1.23E-03
41	GO:0001653: peptide receptor activity	1.23E-03
42	GO:0015086: cadmium ion transmembrane transporter activity	1.23E-03
43	GO:0004108: citrate (Si)-synthase activity	1.23E-03
44	GO:0030527: structural constituent of chromatin	1.23E-03
45	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.23E-03
46	GO:0004707: MAP kinase activity	1.25E-03
47	GO:0004834: tryptophan synthase activity	1.64E-03
48	GO:0043015: gamma-tubulin binding	1.64E-03
49	GO:0015210: uracil transmembrane transporter activity	1.64E-03
50	GO:0003995: acyl-CoA dehydrogenase activity	1.64E-03
51	GO:0004031: aldehyde oxidase activity	1.64E-03
52	GO:0050302: indole-3-acetaldehyde oxidase activity	1.64E-03
53	GO:0009916: alternative oxidase activity	1.64E-03
54	GO:0005459: UDP-galactose transmembrane transporter activity	2.09E-03
55	GO:0015145: monosaccharide transmembrane transporter activity	2.09E-03
56	GO:0008198: ferrous iron binding	2.09E-03
57	GO:0003997: acyl-CoA oxidase activity	2.09E-03
58	GO:0019137: thioglucosidase activity	2.57E-03
59	GO:0036402: proteasome-activating ATPase activity	2.57E-03
60	GO:0004124: cysteine synthase activity	3.09E-03
61	GO:0051753: mannan synthase activity	3.09E-03
62	GO:0004849: uridine kinase activity	3.09E-03
63	GO:0004012: phospholipid-translocating ATPase activity	3.09E-03
64	GO:0004747: ribokinase activity	3.09E-03
65	GO:0004602: glutathione peroxidase activity	3.09E-03
66	GO:0008237: metallopeptidase activity	3.21E-03
67	GO:0051213: dioxygenase activity	3.61E-03
68	GO:0016301: kinase activity	3.71E-03
69	GO:0004525: ribonuclease III activity	4.23E-03
70	GO:0008865: fructokinase activity	4.23E-03
71	GO:0008142: oxysterol binding	4.84E-03
72	GO:0005507: copper ion binding	4.92E-03
73	GO:0005516: calmodulin binding	5.42E-03
74	GO:0000989: transcription factor activity, transcription factor binding	5.48E-03
75	GO:0071949: FAD binding	5.48E-03
76	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.48E-03
77	GO:0005524: ATP binding	5.58E-03
78	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.15E-03
79	GO:0009672: auxin:proton symporter activity	6.15E-03
80	GO:0047617: acyl-CoA hydrolase activity	6.15E-03
81	GO:0008794: arsenate reductase (glutaredoxin) activity	7.58E-03
82	GO:0008081: phosphoric diester hydrolase activity	9.11E-03
83	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.11E-03
84	GO:0004175: endopeptidase activity	9.92E-03
85	GO:0008131: primary amine oxidase activity	9.92E-03
86	GO:0030552: cAMP binding	1.07E-02
87	GO:0030553: cGMP binding	1.07E-02
88	GO:0017025: TBP-class protein binding	1.07E-02
89	GO:0004497: monooxygenase activity	1.11E-02
90	GO:0008234: cysteine-type peptidase activity	1.15E-02
91	GO:0031625: ubiquitin protein ligase binding	1.15E-02
92	GO:0043130: ubiquitin binding	1.25E-02
93	GO:0043424: protein histidine kinase binding	1.34E-02
94	GO:0005216: ion channel activity	1.34E-02
95	GO:0005345: purine nucleobase transmembrane transporter activity	1.34E-02
96	GO:0016760: cellulose synthase (UDP-forming) activity	1.62E-02
97	GO:0003756: protein disulfide isomerase activity	1.72E-02
98	GO:0003727: single-stranded RNA binding	1.72E-02
99	GO:0004672: protein kinase activity	1.76E-02
100	GO:0003924: GTPase activity	1.82E-02
101	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.91E-02
102	GO:0005249: voltage-gated potassium channel activity	1.93E-02
103	GO:0030551: cyclic nucleotide binding	1.93E-02
104	GO:0030170: pyridoxal phosphate binding	2.06E-02
105	GO:0046872: metal ion binding	2.13E-02
106	GO:0005525: GTP binding	2.16E-02
107	GO:0015144: carbohydrate transmembrane transporter activity	2.22E-02
108	GO:0048038: quinone binding	2.36E-02
109	GO:0004674: protein serine/threonine kinase activity	2.37E-02
110	GO:0005351: sugar:proton symporter activity	2.51E-02
111	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.59E-02
112	GO:0008017: microtubule binding	2.68E-02
113	GO:0016759: cellulose synthase activity	2.71E-02
114	GO:0005200: structural constituent of cytoskeleton	2.83E-02
115	GO:0008375: acetylglucosaminyltransferase activity	3.32E-02
116	GO:0102483: scopolin beta-glucosidase activity	3.45E-02
117	GO:0030247: polysaccharide binding	3.45E-02
118	GO:0005096: GTPase activator activity	3.84E-02
119	GO:0004222: metalloendopeptidase activity	3.97E-02
120	GO:0016788: hydrolase activity, acting on ester bonds	4.03E-02
121	GO:0050897: cobalt ion binding	4.11E-02
122	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.11E-02
123	GO:0016491: oxidoreductase activity	4.37E-02
124	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.39E-02
125	GO:0003993: acid phosphatase activity	4.53E-02
126	GO:0050660: flavin adenine dinucleotide binding	4.57E-02
127	GO:0008422: beta-glucosidase activity	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0010009: cytoplasmic side of endosome membrane	0.00E+00
3	GO:0000323: lytic vacuole	7.98E-08
4	GO:0005886: plasma membrane	1.43E-05
5	GO:0005773: vacuole	1.52E-05
6	GO:0005777: peroxisome	3.65E-05
7	GO:0030173: integral component of Golgi membrane	1.29E-04
8	GO:0016021: integral component of membrane	1.56E-04
9	GO:0005737: cytoplasm	3.08E-04
10	GO:0005783: endoplasmic reticulum	5.46E-04
11	GO:0005849: mRNA cleavage factor complex	1.23E-03
12	GO:0005774: vacuolar membrane	1.48E-03
13	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.64E-03
14	GO:0005776: autophagosome	1.64E-03
15	GO:0010008: endosome membrane	1.99E-03
16	GO:0005794: Golgi apparatus	2.06E-03
17	GO:0005768: endosome	2.17E-03
18	GO:0000815: ESCRT III complex	3.09E-03
19	GO:0031597: cytosolic proteasome complex	3.09E-03
20	GO:0031595: nuclear proteasome complex	3.64E-03
21	GO:0009514: glyoxysome	4.84E-03
22	GO:0005779: integral component of peroxisomal membrane	4.84E-03
23	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.84E-03
24	GO:0031901: early endosome membrane	5.48E-03
25	GO:0005802: trans-Golgi network	6.05E-03
26	GO:0008540: proteasome regulatory particle, base subcomplex	6.15E-03
27	GO:0005789: endoplasmic reticulum membrane	6.17E-03
28	GO:0005765: lysosomal membrane	7.58E-03
29	GO:0005764: lysosome	9.92E-03
30	GO:0030176: integral component of endoplasmic reticulum membrane	1.07E-02
31	GO:0005769: early endosome	1.16E-02
32	GO:0070469: respiratory chain	1.34E-02
33	GO:0031410: cytoplasmic vesicle	1.53E-02
34	GO:0031965: nuclear membrane	2.25E-02
35	GO:0000785: chromatin	2.47E-02
36	GO:0005778: peroxisomal membrane	2.83E-02
37	GO:0005615: extracellular space	2.87E-02
38	GO:0000786: nucleosome	4.25E-02