GO Enrichment Analysis of Co-expressed Genes with
AT2G42010
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000541: positive regulation of protein geranylgeranylation | 0.00E+00 |
| 2 | GO:0010606: positive regulation of cytoplasmic mRNA processing body assembly | 0.00E+00 |
| 3 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 1.07E-04 |
| 4 | GO:0018344: protein geranylgeranylation | 1.40E-04 |
| 5 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.74E-04 |
| 6 | GO:0033962: cytoplasmic mRNA processing body assembly | 2.11E-04 |
| 7 | GO:0017148: negative regulation of translation | 2.11E-04 |
| 8 | GO:0000398: mRNA splicing, via spliceosome | 3.11E-04 |
| 9 | GO:0007389: pattern specification process | 3.32E-04 |
| 10 | GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 3.74E-04 |
| 11 | GO:0048829: root cap development | 4.63E-04 |
| 12 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 6.04E-04 |
| 13 | GO:0006406: mRNA export from nucleus | 8.05E-04 |
| 14 | GO:0030433: ubiquitin-dependent ERAD pathway | 9.65E-04 |
| 15 | GO:0006886: intracellular protein transport | 1.05E-03 |
| 16 | GO:0042147: retrograde transport, endosome to Golgi | 1.13E-03 |
| 17 | GO:0080156: mitochondrial mRNA modification | 1.44E-03 |
| 18 | GO:0007264: small GTPase mediated signal transduction | 1.50E-03 |
| 19 | GO:0048767: root hair elongation | 2.26E-03 |
| 20 | GO:0009910: negative regulation of flower development | 2.41E-03 |
| 21 | GO:0006631: fatty acid metabolic process | 2.88E-03 |
| 22 | GO:0000209: protein polyubiquitination | 3.12E-03 |
| 23 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.46E-03 |
| 24 | GO:0015031: protein transport | 5.53E-03 |
| 25 | GO:0006397: mRNA processing | 1.47E-02 |
| 26 | GO:0009734: auxin-activated signaling pathway | 1.82E-02 |
| 27 | GO:0051301: cell division | 2.29E-02 |
| 28 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.68E-02 |
| 29 | GO:0009733: response to auxin | 3.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000384: first spliceosomal transesterification activity | 0.00E+00 |
| 2 | GO:0005092: GDP-dissociation inhibitor activity | 0.00E+00 |
| 3 | GO:0005093: Rab GDP-dissociation inhibitor activity | 5.03E-05 |
| 4 | GO:0004180: carboxypeptidase activity | 5.03E-05 |
| 5 | GO:0035198: miRNA binding | 7.70E-05 |
| 6 | GO:0003729: mRNA binding | 8.62E-05 |
| 7 | GO:0003995: acyl-CoA dehydrogenase activity | 1.07E-04 |
| 8 | GO:0017137: Rab GTPase binding | 1.40E-04 |
| 9 | GO:0036402: proteasome-activating ATPase activity | 1.74E-04 |
| 10 | GO:0031624: ubiquitin conjugating enzyme binding | 6.53E-04 |
| 11 | GO:0017025: TBP-class protein binding | 7.02E-04 |
| 12 | GO:0003723: RNA binding | 1.23E-03 |
| 13 | GO:0016887: ATPase activity | 1.91E-03 |
| 14 | GO:0008236: serine-type peptidase activity | 2.11E-03 |
| 15 | GO:0005096: GTPase activator activity | 2.26E-03 |
| 16 | GO:0003697: single-stranded DNA binding | 2.56E-03 |
| 17 | GO:0043621: protein self-association | 3.20E-03 |
| 18 | GO:0005516: calmodulin binding | 3.25E-03 |
| 19 | GO:0016874: ligase activity | 4.54E-03 |
| 20 | GO:0016491: oxidoreductase activity | 5.73E-03 |
| 21 | GO:0050660: flavin adenine dinucleotide binding | 1.03E-02 |
| 22 | GO:0061630: ubiquitin protein ligase activity | 1.13E-02 |
| 23 | GO:0042803: protein homodimerization activity | 1.27E-02 |
| 24 | GO:0005524: ATP binding | 1.35E-02 |
| 25 | GO:0003924: GTPase activity | 1.43E-02 |
| 26 | GO:0004674: protein serine/threonine kinase activity | 2.15E-02 |
| 27 | GO:0005507: copper ion binding | 2.77E-02 |
| 28 | GO:0005525: GTP binding | 3.07E-02 |
| 29 | GO:0004842: ubiquitin-protein transferase activity | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005684: U2-type spliceosomal complex | 0.00E+00 |
| 2 | GO:0070274: RES complex | 0.00E+00 |
| 3 | GO:0005686: U2 snRNP | 4.05E-06 |
| 4 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 7.70E-05 |
| 5 | GO:0000502: proteasome complex | 1.87E-04 |
| 6 | GO:0031597: cytosolic proteasome complex | 2.11E-04 |
| 7 | GO:0031595: nuclear proteasome complex | 2.50E-04 |
| 8 | GO:0071011: precatalytic spliceosome | 4.18E-04 |
| 9 | GO:0008540: proteasome regulatory particle, base subcomplex | 4.18E-04 |
| 10 | GO:0071013: catalytic step 2 spliceosome | 5.09E-04 |
| 11 | GO:0000932: P-body | 1.83E-03 |
| 12 | GO:0005829: cytosol | 1.93E-03 |
| 13 | GO:0000151: ubiquitin ligase complex | 2.19E-03 |
| 14 | GO:0031902: late endosome membrane | 2.88E-03 |
| 15 | GO:0016607: nuclear speck | 4.26E-03 |
| 16 | GO:0005623: cell | 5.62E-03 |
| 17 | GO:0005886: plasma membrane | 1.47E-02 |
| 18 | GO:0005777: peroxisome | 2.37E-02 |
| 19 | GO:0005622: intracellular | 3.24E-02 |