Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G41870

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0030644: cellular chloride ion homeostasis0.00E+00
2GO:1903508: positive regulation of nucleic acid-templated transcription0.00E+00
3GO:0042906: xanthine transport0.00E+00
4GO:2000306: positive regulation of photomorphogenesis2.02E-06
5GO:0010206: photosystem II repair2.33E-05
6GO:0006475: internal protein amino acid acetylation4.18E-05
7GO:0006474: N-terminal protein amino acid acetylation4.18E-05
8GO:0017198: N-terminal peptidyl-serine acetylation4.18E-05
9GO:0018002: N-terminal peptidyl-glutamic acid acetylation4.18E-05
10GO:1902884: positive regulation of response to oxidative stress1.04E-04
11GO:0015720: allantoin transport1.04E-04
12GO:0006883: cellular sodium ion homeostasis1.04E-04
13GO:0055129: L-proline biosynthetic process1.04E-04
14GO:0015857: uracil transport1.04E-04
15GO:1901562: response to paraquat1.78E-04
16GO:1902448: positive regulation of shade avoidance1.78E-04
17GO:0071705: nitrogen compound transport1.78E-04
18GO:0030100: regulation of endocytosis2.63E-04
19GO:1901002: positive regulation of response to salt stress3.53E-04
20GO:0016123: xanthophyll biosynthetic process4.50E-04
21GO:0006561: proline biosynthetic process5.51E-04
22GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway5.51E-04
23GO:0045962: positive regulation of development, heterochronic5.51E-04
24GO:0000060: protein import into nucleus, translocation5.51E-04
25GO:0010077: maintenance of inflorescence meristem identity6.58E-04
26GO:0000165: MAPK cascade9.18E-04
27GO:0042538: hyperosmotic salinity response9.50E-04
28GO:0009688: abscisic acid biosynthetic process1.39E-03
29GO:0050826: response to freezing1.82E-03
30GO:0035556: intracellular signal transduction2.00E-03
31GO:0090351: seedling development2.13E-03
32GO:0006863: purine nucleobase transport2.29E-03
33GO:0034976: response to endoplasmic reticulum stress2.29E-03
34GO:0010431: seed maturation2.80E-03
35GO:0016117: carotenoid biosynthetic process3.52E-03
36GO:0006662: glycerol ether metabolic process3.91E-03
37GO:0010182: sugar mediated signaling pathway3.91E-03
38GO:0006970: response to osmotic stress4.01E-03
39GO:0009414: response to water deprivation4.41E-03
40GO:0030163: protein catabolic process4.93E-03
41GO:0044550: secondary metabolite biosynthetic process5.01E-03
42GO:0010286: heat acclimation5.36E-03
43GO:0009911: positive regulation of flower development5.81E-03
44GO:0009788: negative regulation of abscisic acid-activated signaling pathway6.04E-03
45GO:0010029: regulation of seed germination6.04E-03
46GO:0048573: photoperiodism, flowering6.50E-03
47GO:0006950: response to stress6.50E-03
48GO:0015995: chlorophyll biosynthetic process6.50E-03
49GO:0009409: response to cold6.67E-03
50GO:0016311: dephosphorylation6.74E-03
51GO:0009408: response to heat6.79E-03
52GO:0048481: plant ovule development6.98E-03
53GO:0007568: aging7.72E-03
54GO:0009631: cold acclimation7.72E-03
55GO:0009637: response to blue light8.23E-03
56GO:0010114: response to red light9.82E-03
57GO:0009640: photomorphogenesis9.82E-03
58GO:0009644: response to high light intensity1.04E-02
59GO:0009965: leaf morphogenesis1.07E-02
60GO:0009735: response to cytokinin1.10E-02
61GO:0009416: response to light stimulus1.21E-02
62GO:0016310: phosphorylation1.42E-02
63GO:0009740: gibberellic acid mediated signaling pathway1.49E-02
64GO:0016567: protein ubiquitination1.86E-02
65GO:0040008: regulation of growth2.22E-02
66GO:0010228: vegetative to reproductive phase transition of meristem2.37E-02
67GO:0009739: response to gibberellin2.48E-02
68GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.48E-02
69GO:0010468: regulation of gene expression2.60E-02
70GO:0030154: cell differentiation2.67E-02
71GO:0045944: positive regulation of transcription from RNA polymerase II promoter2.96E-02
72GO:0048366: leaf development3.52E-02
73GO:0080167: response to karrikin3.65E-02
74GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.74E-02
75GO:0010200: response to chitin3.74E-02
76GO:0045454: cell redox homeostasis4.15E-02
77GO:0006629: lipid metabolic process4.81E-02
RankGO TermAdjusted P value
1GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
2GO:0042907: xanthine transmembrane transporter activity0.00E+00
3GO:0008685: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity0.00E+00
4GO:1990189: peptide-serine-N-acetyltransferase activity4.18E-05
5GO:0004349: glutamate 5-kinase activity4.18E-05
6GO:0004350: glutamate-5-semialdehyde dehydrogenase activity4.18E-05
7GO:1990190: peptide-glutamate-N-acetyltransferase activity4.18E-05
8GO:0005274: allantoin uptake transmembrane transporter activity1.04E-04
9GO:0015210: uracil transmembrane transporter activity3.53E-04
10GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen4.50E-04
11GO:0003993: acid phosphatase activity6.27E-04
12GO:0071949: FAD binding1.13E-03
13GO:0031072: heat shock protein binding1.82E-03
14GO:0003712: transcription cofactor activity2.13E-03
15GO:0008134: transcription factor binding2.46E-03
16GO:0005345: purine nucleobase transmembrane transporter activity2.62E-03
17GO:0004707: MAP kinase activity2.80E-03
18GO:0003756: protein disulfide isomerase activity3.33E-03
19GO:0008080: N-acetyltransferase activity3.91E-03
20GO:0008236: serine-type peptidase activity6.74E-03
21GO:0031625: ubiquitin protein ligase binding1.30E-02
22GO:0045735: nutrient reservoir activity1.36E-02
23GO:0051082: unfolded protein binding1.55E-02
24GO:0016746: transferase activity, transferring acyl groups1.59E-02
25GO:0016829: lyase activity1.93E-02
26GO:0005515: protein binding1.95E-02
27GO:0004252: serine-type endopeptidase activity1.96E-02
28GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.00E-02
29GO:0003824: catalytic activity2.69E-02
30GO:0046982: protein heterodimerization activity3.09E-02
31GO:0004672: protein kinase activity3.60E-02
32GO:0061630: ubiquitin protein ligase activity3.78E-02
33GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.38E-02
34GO:0003924: GTPase activity4.81E-02
RankGO TermAdjusted P value
1GO:0031415: NatA complex1.04E-04
2GO:0009543: chloroplast thylakoid lumen1.56E-04
3GO:0009898: cytoplasmic side of plasma membrane3.53E-04
4GO:0031977: thylakoid lumen7.08E-04
5GO:0009507: chloroplast3.98E-03
6GO:0031969: chloroplast membrane4.61E-03
7GO:0000151: ubiquitin ligase complex6.98E-03
8GO:0009506: plasmodesma1.25E-02
9GO:0009535: chloroplast thylakoid membrane1.26E-02
10GO:0009579: thylakoid1.44E-02
11GO:0009534: chloroplast thylakoid1.46E-02
12GO:0010287: plastoglobule1.76E-02
13GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.34E-02
14GO:0005737: cytoplasm4.35E-02
15GO:0009570: chloroplast stroma4.83E-02
Gene type



Gene DE type