Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G41640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034484: raffinose catabolic process0.00E+00
2GO:0006792: regulation of sulfur utilization0.00E+00
3GO:0006971: hypotonic response0.00E+00
4GO:0010200: response to chitin7.24E-11
5GO:0010438: cellular response to sulfur starvation8.32E-09
6GO:2000022: regulation of jasmonic acid mediated signaling pathway2.55E-06
7GO:0009751: response to salicylic acid7.71E-06
8GO:0030162: regulation of proteolysis1.59E-05
9GO:0010439: regulation of glucosinolate biosynthetic process1.59E-05
10GO:0045893: positive regulation of transcription, DNA-templated4.31E-05
11GO:0050691: regulation of defense response to virus by host4.45E-05
12GO:0080164: regulation of nitric oxide metabolic process4.45E-05
13GO:0031347: regulation of defense response6.47E-05
14GO:0006355: regulation of transcription, DNA-templated7.34E-05
15GO:2000693: positive regulation of seed maturation1.10E-04
16GO:0071497: cellular response to freezing1.10E-04
17GO:0051592: response to calcium ion1.10E-04
18GO:0080185: effector dependent induction by symbiont of host immune response1.10E-04
19GO:0006351: transcription, DNA-templated1.79E-04
20GO:0080168: abscisic acid transport1.89E-04
21GO:0009741: response to brassinosteroid2.22E-04
22GO:0002229: defense response to oomycetes2.76E-04
23GO:0046345: abscisic acid catabolic process3.73E-04
24GO:0010411: xyloglucan metabolic process4.68E-04
25GO:0009658: chloroplast organization4.79E-04
26GO:0009267: cellular response to starvation5.82E-04
27GO:0047484: regulation of response to osmotic stress5.82E-04
28GO:0009612: response to mechanical stimulus6.94E-04
29GO:0042542: response to hydrogen peroxide7.98E-04
30GO:0010038: response to metal ion8.11E-04
31GO:0042546: cell wall biogenesis8.60E-04
32GO:0009414: response to water deprivation8.87E-04
33GO:0035265: organ growth9.32E-04
34GO:2000070: regulation of response to water deprivation9.32E-04
35GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process9.92E-04
36GO:0030154: cell differentiation1.04E-03
37GO:0048574: long-day photoperiodism, flowering1.06E-03
38GO:2000031: regulation of salicylic acid mediated signaling pathway1.06E-03
39GO:0009753: response to jasmonic acid1.11E-03
40GO:0009873: ethylene-activated signaling pathway1.39E-03
41GO:0006357: regulation of transcription from RNA polymerase II promoter1.43E-03
42GO:0009409: response to cold1.44E-03
43GO:0051555: flavonol biosynthetic process1.47E-03
44GO:1903507: negative regulation of nucleic acid-templated transcription1.61E-03
45GO:0010015: root morphogenesis1.61E-03
46GO:0034605: cellular response to heat2.09E-03
47GO:0002237: response to molecule of bacterial origin2.09E-03
48GO:0009611: response to wounding2.13E-03
49GO:0009737: response to abscisic acid2.87E-03
50GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.94E-03
51GO:0040007: growth3.33E-03
52GO:0010268: brassinosteroid homeostasis4.14E-03
53GO:0009646: response to absence of light4.35E-03
54GO:0009723: response to ethylene4.67E-03
55GO:0016132: brassinosteroid biosynthetic process4.77E-03
56GO:0042742: defense response to bacterium5.05E-03
57GO:0016125: sterol metabolic process5.45E-03
58GO:0009639: response to red or far red light5.45E-03
59GO:0009733: response to auxin5.85E-03
60GO:0001666: response to hypoxia6.15E-03
61GO:0009816: defense response to bacterium, incompatible interaction6.39E-03
62GO:0009627: systemic acquired resistance6.64E-03
63GO:0048573: photoperiodism, flowering6.89E-03
64GO:0016049: cell growth7.14E-03
65GO:0009817: defense response to fungus, incompatible interaction7.39E-03
66GO:0048527: lateral root development8.18E-03
67GO:0045087: innate immune response8.71E-03
68GO:0006855: drug transmembrane transport1.16E-02
69GO:0007275: multicellular organism development1.19E-02
70GO:0042538: hyperosmotic salinity response1.22E-02
71GO:0009738: abscisic acid-activated signaling pathway1.27E-02
72GO:0009909: regulation of flower development1.38E-02
73GO:0009742: brassinosteroid mediated signaling pathway1.72E-02
74GO:0009845: seed germination2.05E-02
75GO:0009651: response to salt stress2.34E-02
76GO:0007623: circadian rhythm2.43E-02
77GO:0009739: response to gibberellin2.63E-02
78GO:0071555: cell wall organization2.66E-02
79GO:0006970: response to osmotic stress3.50E-02
80GO:0080167: response to karrikin3.87E-02
81GO:0046777: protein autophosphorylation4.06E-02
82GO:0006952: defense response4.37E-02
83GO:0045454: cell redox homeostasis4.40E-02
84GO:0045892: negative regulation of transcription, DNA-templated4.45E-02
RankGO TermAdjusted P value
1GO:0043565: sequence-specific DNA binding2.59E-06
2GO:0003700: transcription factor activity, sequence-specific DNA binding8.71E-06
3GO:1901149: salicylic acid binding4.45E-05
4GO:0090440: abscisic acid transporter activity4.45E-05
5GO:0004328: formamidase activity4.45E-05
6GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.89E-04
7GO:0052692: raffinose alpha-galactosidase activity1.89E-04
8GO:0016762: xyloglucan:xyloglucosyl transferase activity2.76E-04
9GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides2.78E-04
10GO:0016798: hydrolase activity, acting on glycosyl bonds4.68E-04
11GO:0080046: quercetin 4'-O-glucosyltransferase activity5.82E-04
12GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting7.86E-04
13GO:0003677: DNA binding8.34E-04
14GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding8.96E-04
15GO:0044212: transcription regulatory region DNA binding9.18E-04
16GO:0031625: ubiquitin protein ligase binding1.21E-03
17GO:0003712: transcription cofactor activity2.25E-03
18GO:0003714: transcription corepressor activity2.60E-03
19GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.94E-03
20GO:0035251: UDP-glucosyltransferase activity2.96E-03
21GO:0004402: histone acetyltransferase activity3.93E-03
22GO:0001085: RNA polymerase II transcription factor binding4.14E-03
23GO:0043531: ADP binding4.43E-03
24GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity5.68E-03
25GO:0004806: triglyceride lipase activity6.89E-03
26GO:0015238: drug transmembrane transporter activity7.65E-03
27GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding8.18E-03
28GO:0045735: nutrient reservoir activity1.45E-02
29GO:0080044: quercetin 7-O-glucosyltransferase activity1.55E-02
30GO:0080043: quercetin 3-O-glucosyltransferase activity1.55E-02
31GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.12E-02
32GO:0015297: antiporter activity2.35E-02
33GO:0008194: UDP-glycosyltransferase activity2.63E-02
34GO:0042802: identical protein binding2.88E-02
35GO:0046982: protein heterodimerization activity3.27E-02
36GO:0003682: chromatin binding3.45E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0019005: SCF ubiquitin ligase complex5.18E-04
3GO:0005615: extracellular space2.94E-03
4GO:0015629: actin cytoskeleton3.33E-03
5GO:0005770: late endosome4.14E-03
6GO:0048046: apoplast6.45E-03
7GO:0005667: transcription factor complex6.64E-03
8GO:0005634: nucleus7.93E-03
9GO:0031902: late endosome membrane9.83E-03
10GO:0005794: Golgi apparatus2.43E-02
11GO:0005618: cell wall2.88E-02
12GO:0009505: plant-type cell wall3.34E-02
Gene type



Gene DE type