Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G41090

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010513: positive regulation of phosphatidylinositol biosynthetic process0.00E+00
2GO:0009946: proximal/distal axis specification0.00E+00
3GO:0046890: regulation of lipid biosynthetic process0.00E+00
4GO:1902290: positive regulation of defense response to oomycetes9.28E-07
5GO:1900150: regulation of defense response to fungus1.29E-05
6GO:0003002: regionalization3.90E-05
7GO:0019510: S-adenosylhomocysteine catabolic process3.90E-05
8GO:0009767: photosynthetic electron transport chain5.16E-05
9GO:0009751: response to salicylic acid8.52E-05
10GO:0033353: S-adenosylmethionine cycle9.72E-05
11GO:0080183: response to photooxidative stress9.72E-05
12GO:0055088: lipid homeostasis9.72E-05
13GO:0071494: cellular response to UV-C1.68E-04
14GO:0010338: leaf formation1.68E-04
15GO:0009052: pentose-phosphate shunt, non-oxidative branch2.48E-04
16GO:0006546: glycine catabolic process3.33E-04
17GO:0019464: glycine decarboxylation via glycine cleavage system3.33E-04
18GO:0045088: regulation of innate immune response3.33E-04
19GO:0009615: response to virus3.37E-04
20GO:0010236: plastoquinone biosynthetic process4.25E-04
21GO:0009759: indole glucosinolate biosynthetic process5.22E-04
22GO:0009094: L-phenylalanine biosynthetic process6.22E-04
23GO:0042742: defense response to bacterium7.10E-04
24GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.28E-04
25GO:0071446: cellular response to salicylic acid stimulus7.28E-04
26GO:1900056: negative regulation of leaf senescence7.28E-04
27GO:0010439: regulation of glucosinolate biosynthetic process8.37E-04
28GO:0048564: photosystem I assembly8.37E-04
29GO:0009753: response to jasmonic acid8.97E-04
30GO:0010120: camalexin biosynthetic process9.50E-04
31GO:2000031: regulation of salicylic acid mediated signaling pathway9.50E-04
32GO:0008356: asymmetric cell division1.19E-03
33GO:1900426: positive regulation of defense response to bacterium1.19E-03
34GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.19E-03
35GO:0051555: flavonol biosynthetic process1.31E-03
36GO:0019684: photosynthesis, light reaction1.44E-03
37GO:0009416: response to light stimulus1.67E-03
38GO:2000028: regulation of photoperiodism, flowering1.72E-03
39GO:0050826: response to freezing1.72E-03
40GO:0002237: response to molecule of bacterial origin1.86E-03
41GO:0010020: chloroplast fission1.86E-03
42GO:0019253: reductive pentose-phosphate cycle1.86E-03
43GO:0009944: polarity specification of adaxial/abaxial axis2.32E-03
44GO:0009863: salicylic acid mediated signaling pathway2.32E-03
45GO:0006366: transcription from RNA polymerase II promoter2.64E-03
46GO:0009617: response to bacterium2.65E-03
47GO:0009814: defense response, incompatible interaction2.80E-03
48GO:0006730: one-carbon metabolic process2.80E-03
49GO:0009625: response to insect2.97E-03
50GO:0006284: base-excision repair3.15E-03
51GO:0042335: cuticle development3.50E-03
52GO:0050832: defense response to fungus3.65E-03
53GO:0006342: chromatin silencing3.69E-03
54GO:0048544: recognition of pollen3.87E-03
55GO:0010286: heat acclimation5.05E-03
56GO:0045892: negative regulation of transcription, DNA-templated5.13E-03
57GO:0009816: defense response to bacterium, incompatible interaction5.69E-03
58GO:0048573: photoperiodism, flowering6.13E-03
59GO:0008219: cell death6.58E-03
60GO:0008152: metabolic process6.86E-03
61GO:0009407: toxin catabolic process7.04E-03
62GO:0010119: regulation of stomatal movement7.27E-03
63GO:0009853: photorespiration7.75E-03
64GO:0042542: response to hydrogen peroxide8.99E-03
65GO:0009744: response to sucrose9.25E-03
66GO:0009636: response to toxic substance1.00E-02
67GO:0009965: leaf morphogenesis1.00E-02
68GO:0009735: response to cytokinin1.01E-02
69GO:0000165: MAPK cascade1.06E-02
70GO:0031347: regulation of defense response1.06E-02
71GO:0042538: hyperosmotic salinity response1.09E-02
72GO:0009611: response to wounding1.13E-02
73GO:0009620: response to fungus1.37E-02
74GO:0007623: circadian rhythm2.16E-02
75GO:0009414: response to water deprivation2.19E-02
76GO:0006979: response to oxidative stress2.26E-02
77GO:0009739: response to gibberellin2.34E-02
78GO:0009658: chloroplast organization2.94E-02
79GO:0006810: transport3.30E-02
80GO:0080167: response to karrikin3.43E-02
81GO:0046686: response to cadmium ion3.50E-02
82GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.51E-02
83GO:0010200: response to chitin3.51E-02
84GO:0006869: lipid transport4.16E-02
85GO:0006629: lipid metabolic process4.53E-02
86GO:0006281: DNA repair4.53E-02
RankGO TermAdjusted P value
1GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
2GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
3GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity6.94E-06
4GO:0004013: adenosylhomocysteinase activity3.90E-05
5GO:0004047: aminomethyltransferase activity9.72E-05
6GO:0004751: ribose-5-phosphate isomerase activity1.68E-04
7GO:0030267: glyoxylate reductase (NADP) activity1.68E-04
8GO:0004375: glycine dehydrogenase (decarboxylating) activity2.48E-04
9GO:0016597: amino acid binding3.19E-04
10GO:0047769: arogenate dehydratase activity3.33E-04
11GO:0004664: prephenate dehydratase activity3.33E-04
12GO:0030414: peptidase inhibitor activity4.25E-04
13GO:0008725: DNA-3-methyladenine glycosylase activity4.25E-04
14GO:0080030: methyl indole-3-acetate esterase activity5.22E-04
15GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.22E-04
16GO:0043295: glutathione binding7.28E-04
17GO:0004708: MAP kinase kinase activity8.37E-04
18GO:0004714: transmembrane receptor protein tyrosine kinase activity8.37E-04
19GO:0051287: NAD binding8.46E-04
20GO:0031072: heat shock protein binding1.72E-03
21GO:0005528: FK506 binding2.32E-03
22GO:0001046: core promoter sequence-specific DNA binding2.32E-03
23GO:0003756: protein disulfide isomerase activity3.15E-03
24GO:0008483: transaminase activity5.05E-03
25GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity5.05E-03
26GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding7.27E-03
27GO:0004674: protein serine/threonine kinase activity7.86E-03
28GO:0004364: glutathione transferase activity8.99E-03
29GO:0005198: structural molecule activity1.00E-02
30GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.03E-02
31GO:0016787: hydrolase activity1.07E-02
32GO:0080043: quercetin 3-O-glucosyltransferase activity1.37E-02
33GO:0080044: quercetin 7-O-glucosyltransferase activity1.37E-02
34GO:0051082: unfolded protein binding1.46E-02
35GO:0005516: calmodulin binding1.67E-02
36GO:0005509: calcium ion binding2.07E-02
37GO:0044212: transcription regulatory region DNA binding2.25E-02
38GO:0008194: UDP-glycosyltransferase activity2.34E-02
39GO:0046982: protein heterodimerization activity2.90E-02
40GO:0016788: hydrolase activity, acting on ester bonds2.98E-02
41GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.90E-02
42GO:0042803: protein homodimerization activity4.03E-02
43GO:0004871: signal transducer activity4.03E-02
44GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.21E-02
45GO:0016301: kinase activity4.84E-02
RankGO TermAdjusted P value
1GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
2GO:0030095: chloroplast photosystem II5.95E-05
3GO:0009535: chloroplast thylakoid membrane7.62E-05
4GO:0009654: photosystem II oxygen evolving complex9.72E-05
5GO:0009543: chloroplast thylakoid lumen1.38E-04
6GO:0019898: extrinsic component of membrane2.16E-04
7GO:0005960: glycine cleavage complex2.48E-04
8GO:0009534: chloroplast thylakoid3.20E-04
9GO:0009941: chloroplast envelope4.05E-04
10GO:0009507: chloroplast5.03E-04
11GO:0000793: condensed chromosome5.22E-04
12GO:0009508: plastid chromosome1.72E-03
13GO:0030176: integral component of endoplasmic reticulum membrane2.01E-03
14GO:0009579: thylakoid2.09E-03
15GO:0009570: chloroplast stroma3.16E-03
16GO:0000790: nuclear chromatin3.32E-03
17GO:0010319: stromule5.05E-03
18GO:0009295: nucleoid5.05E-03
19GO:0009707: chloroplast outer membrane6.58E-03
20GO:0000786: nucleosome7.51E-03
21GO:0031225: anchored component of membrane1.73E-02
22GO:0005886: plasma membrane3.37E-02
23GO:0005730: nucleolus3.80E-02
24GO:0043231: intracellular membrane-bounded organelle4.85E-02
Gene type



Gene DE type