GO Enrichment Analysis of Co-expressed Genes with
AT2G40700
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072722: response to amitrole | 0.00E+00 |
| 2 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 3 | GO:0009617: response to bacterium | 3.09E-09 |
| 4 | GO:0046686: response to cadmium ion | 8.35E-07 |
| 5 | GO:0010120: camalexin biosynthetic process | 1.39E-06 |
| 6 | GO:0010112: regulation of systemic acquired resistance | 1.97E-06 |
| 7 | GO:0042273: ribosomal large subunit biogenesis | 1.36E-05 |
| 8 | GO:0006099: tricarboxylic acid cycle | 1.59E-05 |
| 9 | GO:0010150: leaf senescence | 1.95E-05 |
| 10 | GO:0009697: salicylic acid biosynthetic process | 2.24E-05 |
| 11 | GO:0071456: cellular response to hypoxia | 2.69E-05 |
| 12 | GO:0006102: isocitrate metabolic process | 8.26E-05 |
| 13 | GO:0042742: defense response to bacterium | 8.78E-05 |
| 14 | GO:1990641: response to iron ion starvation | 1.27E-04 |
| 15 | GO:0009700: indole phytoalexin biosynthetic process | 1.27E-04 |
| 16 | GO:0010230: alternative respiration | 1.27E-04 |
| 17 | GO:0055081: anion homeostasis | 1.27E-04 |
| 18 | GO:0009627: systemic acquired resistance | 1.45E-04 |
| 19 | GO:0009682: induced systemic resistance | 2.14E-04 |
| 20 | GO:0010155: regulation of proton transport | 2.94E-04 |
| 21 | GO:0044419: interspecies interaction between organisms | 2.94E-04 |
| 22 | GO:0006423: cysteinyl-tRNA aminoacylation | 2.94E-04 |
| 23 | GO:0006101: citrate metabolic process | 2.94E-04 |
| 24 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 2.94E-04 |
| 25 | GO:0000162: tryptophan biosynthetic process | 4.02E-04 |
| 26 | GO:0010272: response to silver ion | 4.86E-04 |
| 27 | GO:0045039: protein import into mitochondrial inner membrane | 4.86E-04 |
| 28 | GO:0070475: rRNA base methylation | 4.86E-04 |
| 29 | GO:0080055: low-affinity nitrate transport | 4.86E-04 |
| 30 | GO:0006364: rRNA processing | 5.18E-04 |
| 31 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 6.95E-04 |
| 32 | GO:0009855: determination of bilateral symmetry | 6.95E-04 |
| 33 | GO:0046345: abscisic acid catabolic process | 9.21E-04 |
| 34 | GO:0051205: protein insertion into membrane | 9.21E-04 |
| 35 | GO:0080142: regulation of salicylic acid biosynthetic process | 9.21E-04 |
| 36 | GO:0032259: methylation | 1.05E-03 |
| 37 | GO:0006097: glyoxylate cycle | 1.16E-03 |
| 38 | GO:0006461: protein complex assembly | 1.16E-03 |
| 39 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.16E-03 |
| 40 | GO:0018279: protein N-linked glycosylation via asparagine | 1.16E-03 |
| 41 | GO:0055114: oxidation-reduction process | 1.32E-03 |
| 42 | GO:0006561: proline biosynthetic process | 1.43E-03 |
| 43 | GO:0000470: maturation of LSU-rRNA | 1.43E-03 |
| 44 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.71E-03 |
| 45 | GO:0008219: cell death | 1.97E-03 |
| 46 | GO:0009817: defense response to fungus, incompatible interaction | 1.97E-03 |
| 47 | GO:1902074: response to salt | 2.01E-03 |
| 48 | GO:1900056: negative regulation of leaf senescence | 2.01E-03 |
| 49 | GO:0080186: developmental vegetative growth | 2.01E-03 |
| 50 | GO:0009407: toxin catabolic process | 2.17E-03 |
| 51 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.32E-03 |
| 52 | GO:0009819: drought recovery | 2.32E-03 |
| 53 | GO:0045087: innate immune response | 2.48E-03 |
| 54 | GO:0009699: phenylpropanoid biosynthetic process | 2.65E-03 |
| 55 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 2.65E-03 |
| 56 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.65E-03 |
| 57 | GO:0042254: ribosome biogenesis | 2.81E-03 |
| 58 | GO:0043067: regulation of programmed cell death | 3.36E-03 |
| 59 | GO:0009636: response to toxic substance | 3.58E-03 |
| 60 | GO:0009688: abscisic acid biosynthetic process | 3.73E-03 |
| 61 | GO:0043069: negative regulation of programmed cell death | 3.73E-03 |
| 62 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 3.73E-03 |
| 63 | GO:0006032: chitin catabolic process | 3.73E-03 |
| 64 | GO:0000272: polysaccharide catabolic process | 4.12E-03 |
| 65 | GO:0010582: floral meristem determinacy | 4.52E-03 |
| 66 | GO:0015706: nitrate transport | 4.52E-03 |
| 67 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.93E-03 |
| 68 | GO:0006096: glycolytic process | 5.06E-03 |
| 69 | GO:0010143: cutin biosynthetic process | 5.36E-03 |
| 70 | GO:0006541: glutamine metabolic process | 5.36E-03 |
| 71 | GO:0002237: response to molecule of bacterial origin | 5.36E-03 |
| 72 | GO:0009626: plant-type hypersensitive response | 5.39E-03 |
| 73 | GO:0010053: root epidermal cell differentiation | 5.80E-03 |
| 74 | GO:0070588: calcium ion transmembrane transport | 5.80E-03 |
| 75 | GO:0034976: response to endoplasmic reticulum stress | 6.25E-03 |
| 76 | GO:0010025: wax biosynthetic process | 6.25E-03 |
| 77 | GO:2000377: regulation of reactive oxygen species metabolic process | 6.71E-03 |
| 78 | GO:0005992: trehalose biosynthetic process | 6.71E-03 |
| 79 | GO:0006487: protein N-linked glycosylation | 6.71E-03 |
| 80 | GO:0080147: root hair cell development | 6.71E-03 |
| 81 | GO:0009414: response to water deprivation | 7.47E-03 |
| 82 | GO:0016998: cell wall macromolecule catabolic process | 7.68E-03 |
| 83 | GO:0006334: nucleosome assembly | 7.68E-03 |
| 84 | GO:0031348: negative regulation of defense response | 8.18E-03 |
| 85 | GO:0009625: response to insect | 8.69E-03 |
| 86 | GO:0010584: pollen exine formation | 9.21E-03 |
| 87 | GO:0006468: protein phosphorylation | 9.27E-03 |
| 88 | GO:0010501: RNA secondary structure unwinding | 1.03E-02 |
| 89 | GO:0010197: polar nucleus fusion | 1.09E-02 |
| 90 | GO:0009960: endosperm development | 1.09E-02 |
| 91 | GO:0008360: regulation of cell shape | 1.09E-02 |
| 92 | GO:0048544: recognition of pollen | 1.14E-02 |
| 93 | GO:0007166: cell surface receptor signaling pathway | 1.20E-02 |
| 94 | GO:0009851: auxin biosynthetic process | 1.20E-02 |
| 95 | GO:0000302: response to reactive oxygen species | 1.26E-02 |
| 96 | GO:0050832: defense response to fungus | 1.28E-02 |
| 97 | GO:0009615: response to virus | 1.63E-02 |
| 98 | GO:0009607: response to biotic stimulus | 1.70E-02 |
| 99 | GO:0009816: defense response to bacterium, incompatible interaction | 1.70E-02 |
| 100 | GO:0042128: nitrate assimilation | 1.77E-02 |
| 101 | GO:0010043: response to zinc ion | 2.19E-02 |
| 102 | GO:0044550: secondary metabolite biosynthetic process | 2.21E-02 |
| 103 | GO:0045454: cell redox homeostasis | 2.43E-02 |
| 104 | GO:0006631: fatty acid metabolic process | 2.64E-02 |
| 105 | GO:0051707: response to other organism | 2.80E-02 |
| 106 | GO:0006979: response to oxidative stress | 3.01E-02 |
| 107 | GO:0006855: drug transmembrane transport | 3.12E-02 |
| 108 | GO:0009664: plant-type cell wall organization | 3.29E-02 |
| 109 | GO:0009846: pollen germination | 3.29E-02 |
| 110 | GO:0042538: hyperosmotic salinity response | 3.29E-02 |
| 111 | GO:0009809: lignin biosynthetic process | 3.46E-02 |
| 112 | GO:0006486: protein glycosylation | 3.46E-02 |
| 113 | GO:0006857: oligopeptide transport | 3.63E-02 |
| 114 | GO:0006952: defense response | 3.66E-02 |
| 115 | GO:0048316: seed development | 3.98E-02 |
| 116 | GO:0009620: response to fungus | 4.16E-02 |
| 117 | GO:0009409: response to cold | 4.33E-02 |
| 118 | GO:0009553: embryo sac development | 4.35E-02 |
| 119 | GO:0009624: response to nematode | 4.44E-02 |
| 120 | GO:0006396: RNA processing | 4.53E-02 |
| 121 | GO:0009651: response to salt stress | 4.66E-02 |
| 122 | GO:0009735: response to cytokinin | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 2 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 3 | GO:0010298: dihydrocamalexic acid decarboxylase activity | 0.00E+00 |
| 4 | GO:0005507: copper ion binding | 3.47E-06 |
| 5 | GO:0050660: flavin adenine dinucleotide binding | 6.04E-06 |
| 6 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.20E-05 |
| 7 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 2.24E-05 |
| 8 | GO:0043295: glutathione binding | 6.38E-05 |
| 9 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.27E-04 |
| 10 | GO:2001227: quercitrin binding | 1.27E-04 |
| 11 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.27E-04 |
| 12 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 1.27E-04 |
| 13 | GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity | 1.27E-04 |
| 14 | GO:2001147: camalexin binding | 1.27E-04 |
| 15 | GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity | 1.27E-04 |
| 16 | GO:0001054: RNA polymerase I activity | 2.14E-04 |
| 17 | GO:0050897: cobalt ion binding | 2.22E-04 |
| 18 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.94E-04 |
| 19 | GO:0004634: phosphopyruvate hydratase activity | 2.94E-04 |
| 20 | GO:0003994: aconitate hydratase activity | 2.94E-04 |
| 21 | GO:0004817: cysteine-tRNA ligase activity | 2.94E-04 |
| 22 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.94E-04 |
| 23 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.94E-04 |
| 24 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 2.94E-04 |
| 25 | GO:0005506: iron ion binding | 4.41E-04 |
| 26 | GO:0004049: anthranilate synthase activity | 4.86E-04 |
| 27 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 4.86E-04 |
| 28 | GO:0004324: ferredoxin-NADP+ reductase activity | 4.86E-04 |
| 29 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.86E-04 |
| 30 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.18E-04 |
| 31 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 6.95E-04 |
| 32 | GO:0016746: transferase activity, transferring acyl groups | 8.35E-04 |
| 33 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 9.16E-04 |
| 34 | GO:0004031: aldehyde oxidase activity | 9.21E-04 |
| 35 | GO:0050302: indole-3-acetaldehyde oxidase activity | 9.21E-04 |
| 36 | GO:0009055: electron carrier activity | 1.24E-03 |
| 37 | GO:0030976: thiamine pyrophosphate binding | 1.43E-03 |
| 38 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 1.43E-03 |
| 39 | GO:0102391: decanoate--CoA ligase activity | 1.71E-03 |
| 40 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.71E-03 |
| 41 | GO:0004004: ATP-dependent RNA helicase activity | 1.78E-03 |
| 42 | GO:0005524: ATP binding | 1.84E-03 |
| 43 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.87E-03 |
| 44 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.01E-03 |
| 45 | GO:0008143: poly(A) binding | 2.01E-03 |
| 46 | GO:0008168: methyltransferase activity | 2.62E-03 |
| 47 | GO:0003843: 1,3-beta-D-glucan synthase activity | 2.65E-03 |
| 48 | GO:0000287: magnesium ion binding | 2.68E-03 |
| 49 | GO:0003678: DNA helicase activity | 3.00E-03 |
| 50 | GO:0004364: glutathione transferase activity | 3.06E-03 |
| 51 | GO:0030955: potassium ion binding | 3.36E-03 |
| 52 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 3.36E-03 |
| 53 | GO:0004743: pyruvate kinase activity | 3.36E-03 |
| 54 | GO:0004674: protein serine/threonine kinase activity | 3.51E-03 |
| 55 | GO:0004568: chitinase activity | 3.73E-03 |
| 56 | GO:0008171: O-methyltransferase activity | 3.73E-03 |
| 57 | GO:0004713: protein tyrosine kinase activity | 3.73E-03 |
| 58 | GO:0019825: oxygen binding | 4.54E-03 |
| 59 | GO:0009982: pseudouridine synthase activity | 4.93E-03 |
| 60 | GO:0005388: calcium-transporting ATPase activity | 4.93E-03 |
| 61 | GO:0005516: calmodulin binding | 4.94E-03 |
| 62 | GO:0008061: chitin binding | 5.80E-03 |
| 63 | GO:0004386: helicase activity | 6.64E-03 |
| 64 | GO:0031418: L-ascorbic acid binding | 6.71E-03 |
| 65 | GO:0005528: FK506 binding | 6.71E-03 |
| 66 | GO:0003756: protein disulfide isomerase activity | 9.21E-03 |
| 67 | GO:0004499: N,N-dimethylaniline monooxygenase activity | 9.21E-03 |
| 68 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 9.81E-03 |
| 69 | GO:0000166: nucleotide binding | 1.23E-02 |
| 70 | GO:0003729: mRNA binding | 1.41E-02 |
| 71 | GO:0020037: heme binding | 1.54E-02 |
| 72 | GO:0030247: polysaccharide binding | 1.83E-02 |
| 73 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.97E-02 |
| 74 | GO:0016301: kinase activity | 1.99E-02 |
| 75 | GO:0004497: monooxygenase activity | 2.03E-02 |
| 76 | GO:0015238: drug transmembrane transporter activity | 2.04E-02 |
| 77 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.33E-02 |
| 78 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.48E-02 |
| 79 | GO:0003723: RNA binding | 2.53E-02 |
| 80 | GO:0050661: NADP binding | 2.56E-02 |
| 81 | GO:0042393: histone binding | 2.56E-02 |
| 82 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.56E-02 |
| 83 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.96E-02 |
| 84 | GO:0015293: symporter activity | 3.04E-02 |
| 85 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.12E-02 |
| 86 | GO:0051287: NAD binding | 3.20E-02 |
| 87 | GO:0015035: protein disulfide oxidoreductase activity | 4.53E-02 |
| 88 | GO:0008026: ATP-dependent helicase activity | 4.63E-02 |
| 89 | GO:0004672: protein kinase activity | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034455: t-UTP complex | 0.00E+00 |
| 2 | GO:0019034: viral replication complex | 0.00E+00 |
| 3 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 4 | GO:0005730: nucleolus | 1.02E-05 |
| 5 | GO:0005829: cytosol | 2.10E-05 |
| 6 | GO:0008250: oligosaccharyltransferase complex | 2.24E-05 |
| 7 | GO:0045252: oxoglutarate dehydrogenase complex | 1.27E-04 |
| 8 | GO:0005736: DNA-directed RNA polymerase I complex | 1.28E-04 |
| 9 | GO:0005783: endoplasmic reticulum | 2.80E-04 |
| 10 | GO:0000015: phosphopyruvate hydratase complex | 2.94E-04 |
| 11 | GO:0005901: caveola | 2.94E-04 |
| 12 | GO:0005886: plasma membrane | 7.86E-04 |
| 13 | GO:0005789: endoplasmic reticulum membrane | 1.06E-03 |
| 14 | GO:0009506: plasmodesma | 1.71E-03 |
| 15 | GO:0030687: preribosome, large subunit precursor | 2.01E-03 |
| 16 | GO:0034399: nuclear periphery | 2.32E-03 |
| 17 | GO:0000326: protein storage vacuole | 2.65E-03 |
| 18 | GO:0000148: 1,3-beta-D-glucan synthase complex | 2.65E-03 |
| 19 | GO:0009505: plant-type cell wall | 2.84E-03 |
| 20 | GO:0010494: cytoplasmic stress granule | 3.00E-03 |
| 21 | GO:0005740: mitochondrial envelope | 3.73E-03 |
| 22 | GO:0005774: vacuolar membrane | 5.30E-03 |
| 23 | GO:0005834: heterotrimeric G-protein complex | 5.39E-03 |
| 24 | GO:0043234: protein complex | 6.25E-03 |
| 25 | GO:0016021: integral component of membrane | 7.15E-03 |
| 26 | GO:0005741: mitochondrial outer membrane | 7.68E-03 |
| 27 | GO:0016020: membrane | 7.84E-03 |
| 28 | GO:0009504: cell plate | 1.20E-02 |
| 29 | GO:0005788: endoplasmic reticulum lumen | 1.70E-02 |
| 30 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.79E-02 |
| 31 | GO:0048046: apoplast | 1.81E-02 |
| 32 | GO:0005773: vacuole | 3.41E-02 |
| 33 | GO:0005747: mitochondrial respiratory chain complex I | 3.98E-02 |