co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G40480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010597: green leaf volatile biosynthetic process	1.21E-05
2	GO:0006438: valyl-tRNA aminoacylation	1.21E-05
3	GO:2000123: positive regulation of stomatal complex development	3.21E-05
4	GO:2000038: regulation of stomatal complex development	1.22E-04
5	GO:0034440: lipid oxidation	1.22E-04
6	GO:0010375: stomatal complex patterning	1.59E-04
7	GO:0006458: 'de novo' protein folding	2.39E-04
8	GO:0042026: protein refolding	2.39E-04
9	GO:0006880: intracellular sequestering of iron ion	2.82E-04
10	GO:0080027: response to herbivore	2.82E-04
11	GO:0006826: iron ion transport	2.82E-04
12	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	3.73E-04
13	GO:0019684: photosynthesis, light reaction	5.71E-04
14	GO:0006879: cellular iron ion homeostasis	5.71E-04
15	GO:0009767: photosynthetic electron transport chain	6.76E-04
16	GO:0010039: response to iron ion	7.88E-04
17	GO:0009695: jasmonic acid biosynthetic process	9.61E-04
18	GO:0006418: tRNA aminoacylation for protein translation	9.61E-04
19	GO:0031408: oxylipin biosynthetic process	1.02E-03
20	GO:0061077: chaperone-mediated protein folding	1.02E-03
21	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.06E-03
22	GO:0007005: mitochondrion organization	1.08E-03
23	GO:0006284: base-excision repair	1.21E-03
24	GO:0008360: regulation of cell shape	1.40E-03
25	GO:0055072: iron ion homeostasis	1.54E-03
26	GO:0000302: response to reactive oxygen species	1.61E-03
27	GO:0007267: cell-cell signaling	1.91E-03
28	GO:0009407: toxin catabolic process	2.63E-03
29	GO:0010218: response to far red light	2.63E-03
30	GO:0010114: response to red light	3.43E-03
31	GO:0051707: response to other organism	3.43E-03
32	GO:0009636: response to toxic substance	3.71E-03
33	GO:0009620: response to fungus	5.02E-03
34	GO:0009790: embryo development	6.94E-03
35	GO:0006810: transport	7.65E-03
36	GO:0009617: response to bacterium	8.82E-03
37	GO:0009658: chloroplast organization	1.06E-02
38	GO:0048366: leaf development	1.19E-02
39	GO:0015979: photosynthesis	1.35E-02
40	GO:0006869: lipid transport	1.49E-02
41	GO:0016042: lipid catabolic process	1.59E-02
42	GO:0006281: DNA repair	1.62E-02
43	GO:0009753: response to jasmonic acid	1.71E-02
44	GO:0008152: metabolic process	1.74E-02
45	GO:0009908: flower development	2.27E-02
46	GO:0009611: response to wounding	2.48E-02
47	GO:0006457: protein folding	2.94E-02
48	GO:0009414: response to water deprivation	3.97E-02
49	GO:0071555: cell wall organization	4.04E-02
50	GO:0006468: protein phosphorylation	4.05E-02
51	GO:0006979: response to oxidative stress	4.06E-02
52	GO:0030154: cell differentiation	4.29E-02

Rank	GO Term	Adjusted P value
1	GO:0004832: valine-tRNA ligase activity	1.21E-05
2	GO:0016165: linoleate 13S-lipoxygenase activity	5.78E-05
3	GO:0008199: ferric iron binding	8.79E-05
4	GO:0004322: ferroxidase activity	8.79E-05
5	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.59E-04
6	GO:0008725: DNA-3-methyladenine glycosylase activity	1.59E-04
7	GO:0080030: methyl indole-3-acetate esterase activity	1.98E-04
8	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.39E-04
9	GO:0043295: glutathione binding	2.82E-04
10	GO:0003843: 1,3-beta-D-glucan synthase activity	3.73E-04
11	GO:0044183: protein binding involved in protein folding	5.71E-04
12	GO:0016788: hydrolase activity, acting on ester bonds	8.52E-04
13	GO:0004812: aminoacyl-tRNA ligase activity	1.27E-03
14	GO:0001085: RNA polymerase II transcription factor binding	1.40E-03
15	GO:0019901: protein kinase binding	1.54E-03
16	GO:0004518: nuclease activity	1.68E-03
17	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.71E-03
18	GO:0016757: transferase activity, transferring glycosyl groups	2.96E-03
19	GO:0004364: glutathione transferase activity	3.33E-03
20	GO:0051082: unfolded protein binding	5.34E-03
21	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	6.82E-03
22	GO:0004672: protein kinase activity	7.65E-03
23	GO:0003682: chromatin binding	1.10E-02
24	GO:0052689: carboxylic ester hydrolase activity	1.32E-02
25	GO:0005524: ATP binding	1.88E-02
26	GO:0008289: lipid binding	2.05E-02
27	GO:0016887: ATPase activity	2.22E-02
28	GO:0004674: protein serine/threonine kinase activity	2.58E-02
29	GO:0016740: transferase activity	2.81E-02
30	GO:0005507: copper ion binding	3.14E-02
31	GO:0005509: calcium ion binding	3.81E-02
32	GO:0005506: iron ion binding	3.99E-02
33	GO:0044212: transcription regulatory region DNA binding	4.04E-02
34	GO:0005215: transporter activity	4.34E-02

Rank	GO Term	Adjusted P value
1	GO:0009344: nitrite reductase complex [NAD(P)H]	1.21E-05
2	GO:0000148: 1,3-beta-D-glucan synthase complex	3.73E-04
3	GO:0030095: chloroplast photosystem II	7.31E-04
4	GO:0009654: photosystem II oxygen evolving complex	9.61E-04
5	GO:0009570: chloroplast stroma	1.25E-03
6	GO:0019898: extrinsic component of membrane	1.54E-03
7	GO:0005667: transcription factor complex	2.22E-03
8	GO:0009941: chloroplast envelope	4.45E-03
9	GO:0009543: chloroplast thylakoid lumen	6.23E-03
10	GO:0009535: chloroplast thylakoid membrane	1.17E-02
11	GO:0048046: apoplast	1.90E-02
12	GO:0005886: plasma membrane	2.24E-02
13	GO:0022626: cytosolic ribosome	2.37E-02
14	GO:0009579: thylakoid	2.77E-02
15	GO:0009534: chloroplast thylakoid	2.79E-02
16	GO:0031225: anchored component of membrane	3.35E-02
17	GO:0009507: chloroplast	3.38E-02
18	GO:0009536: plastid	4.67E-02